RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 ERVK-11Q9UQG0 969 aa14.15□□□□□ -0.14
TPM1-206ENST00000358278 HEMK1Q9Y5R4 338 aaPredicted RBP14.15□□□□□ -0.14
TPM1-206ENST00000358278 NBEAQ8NFP9 2946 aa14.15□□□□□ -0.14
TPM1-206ENST00000358278 PIEZO2Q9H5I5 2752 aa14.15□□□□□ -0.14
TPM1-206ENST00000358278 C2orf92A0A1B0GVN3 265 aa14.15□□□□□ -0.14
TPM1-206ENST00000358278 A6NL46 340 aa14.15□□□□□ -0.14
TPM1-206ENST00000358278 A8MUI8 341 aa14.15□□□□□ -0.14
TPM1-206ENST00000358278 DNAJB5O75953 348 aa14.15□□□□□ -0.14
TPM1-206ENST00000358278 EMDP50402 254 aa14.15□□□□□ -0.14
TPM1-206ENST00000358278 CCL11P51671 97 aa14.15□□□□□ -0.14
TPM1-206ENST00000358278 EBPQ15125 230 aaKnown RBP14.15□□□□□ -0.14
TPM1-206ENST00000358278 FAM91A1Q658Y4 838 aa14.15□□□□□ -0.14
TPM1-206ENST00000358278 RETREG3Q86VR2 466 aa14.15□□□□□ -0.14
TPM1-206ENST00000358278 APLFQ8IW19 511 aaPredicted RBP14.15□□□□□ -0.14
TPM1-206ENST00000358278 DPP10Q8N608 796 aa14.15□□□□□ -0.14
TPM1-206ENST00000358278 SLC5A8Q8N695 610 aa14.15□□□□□ -0.14
TPM1-206ENST00000358278 SIRT6Q8N6T7 355 aa14.15□□□□□ -0.14
TPM1-206ENST00000358278 OR8K3Q8NH51 312 aa14.15□□□□□ -0.14
TPM1-206ENST00000358278 DNAJB8Q8NHS0 232 aa14.15□□□□□ -0.14
TPM1-206ENST00000358278 APOBEC4Q8WW27 367 aaKnown RBP14.15□□□□□ -0.14
TPM1-206ENST00000358278 JADE3Q92613 823 aa14.15□□□□□ -0.14
TPM1-206ENST00000358278 RCN3Q96D15 328 aa14.15□□□□□ -0.14
TPM1-206ENST00000358278 SLC35G5Q96KT7 338 aa14.15□□□□□ -0.14
TPM1-206ENST00000358278 TRIM4Q9C037 500 aa14.15□□□□□ -0.14
TPM1-206ENST00000358278 WWTR1Q9GZV5 400 aa14.15□□□□□ -0.14
TPM1-206ENST00000358278 PAIP1Q9H074 479 aaKnown RBP14.15□□□□□ -0.14
TPM1-206ENST00000358278 IL1RL2Q9HB29 575 aa14.15□□□□□ -0.14
TPM1-206ENST00000358278 FOLH1BQ9HBA9 442 aa14.15□□□□□ -0.14
TPM1-206ENST00000358278 SLC6A13Q9NSD5 602 aa14.15□□□□□ -0.14
TPM1-206ENST00000358278 SLAMF8Q9P0V8 285 aa14.15□□□□□ -0.14
TPM1-206ENST00000358278 NTMQ9P121 344 aa14.15□□□□□ -0.14
TPM1-206ENST00000358278 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.15□□□□□ -0.14
TPM1-206ENST00000358278 DTX4Q9Y2E6 619 aa14.15□□□□□ -0.14
TPM1-206ENST00000358278 PCDHB14Q9Y5E9 798 aa14.15□□□□□ -0.14
TPM1-206ENST00000358278 EML6Q6ZMW3 1958 aa14.14□□□□□ -0.15
TPM1-206ENST00000358278 PRKNO60260 465 aaPredicted RBP14.14□□□□□ -0.15
TPM1-206ENST00000358278 NME6O75414 186 aaPredicted RBP14.14□□□□□ -0.15
TPM1-206ENST00000358278 PSMG1O95456 288 aa14.14□□□□□ -0.15
TPM1-206ENST00000358278 HMGN2P05204 90 aaKnown RBP14.14□□□□□ -0.15
TPM1-206ENST00000358278 ZCCHC18P0CG32 403 aa14.14□□□□□ -0.15
TPM1-206ENST00000358278 RAPSNQ13702 412 aa14.14□□□□□ -0.15
TPM1-206ENST00000358278 LASP1Q14847 261 aaKnown RBP14.14□□□□□ -0.15
TPM1-206ENST00000358278 MYBPC3Q14896 1274 aa14.14□□□□□ -0.15
TPM1-206ENST00000358278 ZNHIT3Q15649 155 aaPredicted RBP14.14□□□□□ -0.15
TPM1-206ENST00000358278 GTDC1Q4AE62 458 aa14.14□□□□□ -0.15
TPM1-206ENST00000358278 LRIF1Q5T3J3 769 aa14.14□□□□□ -0.15
TPM1-206ENST00000358278 BORAQ6PGQ7 559 aa14.14□□□□□ -0.15
TPM1-206ENST00000358278 OR5L2Q8NGL0 311 aa14.14□□□□□ -0.15
TPM1-206ENST00000358278 NUBPLQ8TB37 319 aa14.14□□□□□ -0.15
TPM1-206ENST00000358278 SNRNP27Q8WVK2 155 aaKnown RBP14.14□□□□□ -0.15
TPM1-206ENST00000358278 ITPAQ9BY32 194 aa14.14□□□□□ -0.15
TPM1-206ENST00000358278 ARL8BQ9NVJ2 186 aa14.14□□□□□ -0.15
TPM1-206ENST00000358278 GPR83Q9NYM4 423 aa14.14□□□□□ -0.15
TPM1-206ENST00000358278 TEKT2Q9UIF3 430 aa14.14□□□□□ -0.15
TPM1-206ENST00000358278 FAF1Q9UNN5 650 aaPredicted RBP14.14□□□□□ -0.15
TPM1-206ENST00000358278 AIM2O14862 343 aa14.13□□□□□ -0.15
TPM1-206ENST00000358278 PTPN6P29350 595 aa14.13□□□□□ -0.15
TPM1-206ENST00000358278 PRIM2P49643 509 aa14.13□□□□□ -0.15
TPM1-206ENST00000358278 KRT72Q14CN4 511 aa14.13□□□□□ -0.15
TPM1-206ENST00000358278 NNATQ16517 81 aa14.13□□□□□ -0.15
TPM1-206ENST00000358278 TRMT5Q32P41 509 aaKnown RBP14.13□□□□□ -0.15
TPM1-206ENST00000358278 FCRLBQ6BAA4 426 aa14.13□□□□□ -0.15
TPM1-206ENST00000358278 TCTN3Q6NUS6 607 aa14.13□□□□□ -0.15
TPM1-206ENST00000358278 C6orf120Q7Z4R8 191 aa14.13□□□□□ -0.15
TPM1-206ENST00000358278 WDR53Q7Z5U6 358 aaPredicted RBP14.13□□□□□ -0.15
TPM1-206ENST00000358278 FBXO30Q8TB52 745 aa14.13□□□□□ -0.15
TPM1-206ENST00000358278 PNPT1Q8TCS8 783 aaKnown RBP14.13□□□□□ -0.15
TPM1-206ENST00000358278 NEURL3Q96EH8 262 aa14.13□□□□□ -0.15
TPM1-206ENST00000358278 AURKBQ96GD4 344 aaPredicted RBP14.13□□□□□ -0.15
TPM1-206ENST00000358278 VSTM2LQ96N03 204 aa14.13□□□□□ -0.15
TPM1-206ENST00000358278 PHF12Q96QT6 1004 aa14.13□□□□□ -0.15
TPM1-206ENST00000358278 LIN28AQ9H9Z2 209 aaKnown RBP14.13□□□□□ -0.15
TPM1-206ENST00000358278 EFCAB1Q9HAE3 211 aa14.13□□□□□ -0.15
TPM1-206ENST00000358278 TAGLN3Q9UI15 199 aa14.13□□□□□ -0.15
TPM1-206ENST00000358278 EPG5Q9HCE0 2579 aa14.13□□□□□ -0.15
TPM1-206ENST00000358278 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.12□□□□□ -0.15
TPM1-206ENST00000358278 KRT75O95678 551 aa14.12□□□□□ -0.15
TPM1-206ENST00000358278 KRT16P08779 473 aa14.12□□□□□ -0.15
TPM1-206ENST00000358278 CPA2P48052 419 aa14.12□□□□□ -0.15
TPM1-206ENST00000358278 NUDT2P50583 147 aa14.12□□□□□ -0.15
TPM1-206ENST00000358278 SOX8P57073 446 aa14.12□□□□□ -0.15
TPM1-206ENST00000358278 RPS26P62854 115 aaKnown RBP14.12□□□□□ -0.15
TPM1-206ENST00000358278 SAXO2Q658L1 398 aa14.12□□□□□ -0.15
TPM1-206ENST00000358278 MFSD12Q6NUT3 480 aa14.12□□□□□ -0.15
TPM1-206ENST00000358278 DLEU7Q6UYE1 221 aa14.12□□□□□ -0.15
TPM1-206ENST00000358278 CDRT4Q8N9R6 151 aa14.12□□□□□ -0.15
TPM1-206ENST00000358278 ZFP90Q8TF47 636 aa14.12□□□□□ -0.15
TPM1-206ENST00000358278 SLC9A6Q92581 669 aa14.12□□□□□ -0.15
TPM1-206ENST00000358278 GIMAP5Q96F15 307 aa14.12□□□□□ -0.15
TPM1-206ENST00000358278 CRELD1Q96HD1 420 aa14.12□□□□□ -0.15
TPM1-206ENST00000358278 YIPF4Q9BSR8 244 aa14.12□□□□□ -0.15
TPM1-206ENST00000358278 ACTRT3Q9BYD9 372 aa14.12□□□□□ -0.15
TPM1-206ENST00000358278 TPT1P8Q9HAU6 139 aa14.12□□□□□ -0.15
TPM1-206ENST00000358278 GPATCH2Q9NW75 528 aa14.12□□□□□ -0.15
TPM1-206ENST00000358278 GID8Q9NWU2 228 aa14.12□□□□□ -0.15
TPM1-206ENST00000358278 VAPAQ9P0L0 249 aa14.12□□□□□ -0.15
TPM1-206ENST00000358278 MAP10Q9P2G4 905 aa14.12□□□□□ -0.15
TPM1-206ENST00000358278 MYOTQ9UBF9 498 aa14.12□□□□□ -0.15
TPM1-206ENST00000358278 WWP2O00308 870 aa14.12□□□□□ -0.15
TPM1-206ENST00000358278 CBX6O95503 412 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms