RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 BTBD16Q32M84 506 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 C6orf10Q5SRN2 563 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.73□□□□□ -1.81
LIG4-201ENST00000356922 REP15Q6BDI9 236 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 NANOGP8Q6NSW7 305 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 ERMP1Q7Z2K6 904 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 GPR155Q7Z3F1 870 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 C6orf120Q7Z4R8 191 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 GALNT12Q8IXK2 581 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 PRR22Q8IZ63 422 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 VWA5B2Q8N398 1253 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 RBM15BQ8NDT2 890 aaKnown RBP3.73□□□□□ -1.81
LIG4-201ENST00000356922 OR4A15Q8NGL6 344 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 OR1N1Q8NGS0 311 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 GOT1L1Q8NHS2 421 aaPredicted RBP3.73□□□□□ -1.81
LIG4-201ENST00000356922 ZFP90Q8TF47 636 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 EXTL1Q92935 676 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 MTERF3Q96E29 417 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 SLC35A4Q96G79 324 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 VSTM2LQ96N03 204 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 DGAT2Q96PD7 388 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 WFDC6Q9BQY6 131 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 SEMA4CQ9C0C4 833 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 ING2Q9H160 280 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 NXF5Q9H1B4 397 aaKnown RBP3.73□□□□□ -1.81
LIG4-201ENST00000356922 OR10A5Q9H207 317 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 NANOGQ9H9S0 305 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 SEMA3GQ9NS98 782 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 C14orf105Q9NVL8 296 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 CMTM6Q9NX76 183 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 TAS2R1Q9NYW7 299 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 VPS4AQ9UN37 437 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 MMACHCQ9Y4U1 282 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 KCNMB2Q9Y691 235 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 CAPN7Q9Y6W3 813 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 NBPF19A0A087WUL8 3843 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 A0A087WV48 116 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 A0A1W2PQ72 361 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 SAGE2PA6NJ88 616 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 PLOD2O00469 737 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 RFXANKO14593 260 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 ADAM10O14672 748 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 PLOD3O60568 738 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 BCAS1O75363 584 aaPredicted RBP3.73□□□□□ -1.81
LIG4-201ENST00000356922 ACP2P11117 423 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 ETFAP13804 333 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 IL10P22301 178 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 CD82P27701 267 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 HPCAL1P37235 193 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 GZMMP51124 257 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 CCL11P51671 97 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 CYLC2Q14093 348 aaPredicted RBP3.73□□□□□ -1.81
LIG4-201ENST00000356922 LASP1Q14847 261 aaKnown RBP3.73□□□□□ -1.81
LIG4-201ENST00000356922 DUSP5Q16690 384 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 EXOSC6Q5RKV6 272 aaKnown RBP3.73□□□□□ -1.81
LIG4-201ENST00000356922 BICRALQ6AI39 1079 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 PCSK4Q6UW60 755 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 NDUFAF7Q7L592 441 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 MDGA2Q7Z553 956 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 COMTD1Q86VU5 262 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 RNF130Q86XS8 419 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 HORMAD2Q8N7B1 307 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 GLB1L3Q8NCI6 653 aaPredicted RBP3.73□□□□□ -1.81
LIG4-201ENST00000356922 B3GNT7Q8NFL0 401 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 FDCSPQ8NFU4 85 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 BRIX1Q8TDN6 353 aaKnown RBP3.73□□□□□ -1.81
LIG4-201ENST00000356922 ZCCHC14Q8WYQ9 949 aaKnown RBP3.73□□□□□ -1.81
LIG4-201ENST00000356922 LRRC58Q96CX6 371 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 FBXL20Q96IG2 436 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 PRPF18Q99633 342 aaKnown RBP3.73□□□□□ -1.81
LIG4-201ENST00000356922 GPATCH1Q9BRR8 931 aaKnown RBP3.73□□□□□ -1.81
LIG4-201ENST00000356922 ITPAQ9BY32 194 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 QRSL1Q9H0R6 528 aaKnown RBP3.73□□□□□ -1.81
LIG4-201ENST00000356922 ACSS1Q9NUB1 689 aaPredicted RBP3.73□□□□□ -1.81
LIG4-201ENST00000356922 PLA2G3Q9NZ20 509 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 NTMQ9P121 344 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 KCNE5Q9UJ90 142 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 RALYQ9UKM9 306 aaKnown RBP3.73□□□□□ -1.81
LIG4-201ENST00000356922 PSME2Q9UL46 239 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 PCDHGB4Q9UN71 923 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 PPIEQ9UNP9 301 aaKnown RBP3.73□□□□□ -1.81
LIG4-201ENST00000356922 MAN2B2Q9Y2E5 1009 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 NDUFAF1Q9Y375 327 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 LRBAP50851 2863 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 VPS13CQ709C8 3753 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 C2orf72A6NCS6 295 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 CLDN24A6NM45 220 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 K7ENP7 123 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 HMGN4O00479 90 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 CCDC22O60826 627 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 OR2J2O76002 312 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 FUT4P22083 530 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 GPC1P35052 558 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 KCNK10P57789 538 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 RNF4P78317 190 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 MXRA7P84157 204 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 PLAURQ03405 335 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 MLC1Q15049 377 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 EBPQ15125 230 aaKnown RBP3.73□□□□□ -1.81
LIG4-201ENST00000356922 LRIF1Q5T3J3 769 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms