RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.56□□□□□ -0.88
PTPRA-203ENST00000356147 A0A1W2PRU2 124 aa9.56□□□□□ -0.88
PTPRA-203ENST00000356147 A8MVJ9 347 aa9.56□□□□□ -0.88
PTPRA-203ENST00000356147 NEDD8-MDP1E9PL57 170 aa9.56□□□□□ -0.88
PTPRA-203ENST00000356147 GABRPO00591 440 aa9.56□□□□□ -0.88
PTPRA-203ENST00000356147 ORC5O43913 435 aa9.56□□□□□ -0.88
PTPRA-203ENST00000356147 C1orf105O95561 183 aa9.56□□□□□ -0.88
PTPRA-203ENST00000356147 FAM157BP0CG42 384 aa9.56□□□□□ -0.88
PTPRA-203ENST00000356147 CXCL3P19876 107 aa9.56□□□□□ -0.88
PTPRA-203ENST00000356147 SMSP52788 366 aa9.56□□□□□ -0.88
PTPRA-203ENST00000356147 GAS1P54826 345 aa9.56□□□□□ -0.88
PTPRA-203ENST00000356147 CLDN20P56880 219 aa9.56□□□□□ -0.88
PTPRA-203ENST00000356147 C19orf57Q0VDD7 668 aa9.56□□□□□ -0.88
PTPRA-203ENST00000356147 ZNF267Q14586 743 aaPredicted RBP9.56□□□□□ -0.88
PTPRA-203ENST00000356147 Q6ZNB5 142 aa9.56□□□□□ -0.88
PTPRA-203ENST00000356147 GLRX5Q86SX6 157 aa9.56□□□□□ -0.88
PTPRA-203ENST00000356147 LRRTM4Q86VH4 590 aa9.56□□□□□ -0.88
PTPRA-203ENST00000356147 FAM20CQ8IXL6 584 aa9.56□□□□□ -0.88
PTPRA-203ENST00000356147 C9orf62Q8N4C0 152 aa9.56□□□□□ -0.88
PTPRA-203ENST00000356147 OR11H4Q8NGC9 324 aa9.56□□□□□ -0.88
PTPRA-203ENST00000356147 AP3S1Q92572 193 aa9.56□□□□□ -0.88
PTPRA-203ENST00000356147 ZG16BQ96DA0 208 aa9.56□□□□□ -0.88
PTPRA-203ENST00000356147 FAM46AQ96IP4 442 aaKnown RBP9.56□□□□□ -0.88
PTPRA-203ENST00000356147 FOPNLQ96NB1 174 aa9.56□□□□□ -0.88
PTPRA-203ENST00000356147 TTTY10Q9BZA0 68 aa9.56□□□□□ -0.88
PTPRA-203ENST00000356147 RETREG1Q9H6L5 497 aa9.56□□□□□ -0.88
PTPRA-203ENST00000356147 ISG20L2Q9H9L3 353 aaKnown RBP9.56□□□□□ -0.88
PTPRA-203ENST00000356147 NUDT15Q9NV35 164 aa9.56□□□□□ -0.88
PTPRA-203ENST00000356147 ZSCAN32Q9NX65 697 aa9.56□□□□□ -0.88
PTPRA-203ENST00000356147 TEX10Q9NXF1 929 aaPredicted RBP9.56□□□□□ -0.88
PTPRA-203ENST00000356147 ZNF624Q9P2J8 865 aaPredicted RBP9.56□□□□□ -0.88
PTPRA-203ENST00000356147 KLHL42Q9P2K6 505 aa9.56□□□□□ -0.88
PTPRA-203ENST00000356147 CSNK1G3Q9Y6M4 447 aa9.56□□□□□ -0.88
PTPRA-203ENST00000356147 A0A1W2PPK0 400 aa9.56□□□□□ -0.88
PTPRA-203ENST00000356147 A0A1W2PS29 197 aa9.56□□□□□ -0.88
PTPRA-203ENST00000356147 PLPP1O14494 284 aa9.56□□□□□ -0.88
PTPRA-203ENST00000356147 EEF1E1O43324 174 aaKnown RBP9.56□□□□□ -0.88
PTPRA-203ENST00000356147 ATG13O75143 517 aa9.56□□□□□ -0.88
PTPRA-203ENST00000356147 PSMB5P28074 263 aa9.56□□□□□ -0.88
PTPRA-203ENST00000356147 KCNJ5P48544 419 aa9.56□□□□□ -0.88
PTPRA-203ENST00000356147 OR10A3P58181 314 aa9.56□□□□□ -0.88
PTPRA-203ENST00000356147 PPP3R1P63098 170 aa9.56□□□□□ -0.88
PTPRA-203ENST00000356147 FKBP1BP68106 108 aa9.56□□□□□ -0.88
PTPRA-203ENST00000356147 BNC1Q01954 994 aa9.56□□□□□ -0.88
PTPRA-203ENST00000356147 TAP2Q03519 686 aa9.56□□□□□ -0.88
PTPRA-203ENST00000356147 TNK1Q13470 666 aa9.56□□□□□ -0.88
PTPRA-203ENST00000356147 GPR176Q14439 515 aa9.56□□□□□ -0.88
PTPRA-203ENST00000356147 FGFBP1Q14512 234 aa9.56□□□□□ -0.88
PTPRA-203ENST00000356147 GDPD4Q6W3E5 623 aa9.56□□□□□ -0.88
PTPRA-203ENST00000356147 DEFB128Q7Z7B8 93 aa9.56□□□□□ -0.88
PTPRA-203ENST00000356147 ANKK1Q8NFD2 765 aa9.56□□□□□ -0.88
PTPRA-203ENST00000356147 POF1BQ8WVV4 589 aa9.56□□□□□ -0.88
PTPRA-203ENST00000356147 SPRYD4Q8WW59 207 aaPredicted RBP9.56□□□□□ -0.88
PTPRA-203ENST00000356147 ZNF354BQ96LW1 612 aa9.56□□□□□ -0.88
PTPRA-203ENST00000356147 OR2AG1Q9H205 316 aa9.56□□□□□ -0.88
PTPRA-203ENST00000356147 CPSF4LA6NMK7 179 aaKnown RBP9.56□□□□□ -0.88
PTPRA-203ENST00000356147 LGI1O95970 557 aa9.56□□□□□ -0.88
PTPRA-203ENST00000356147 SOD1P00441 154 aa9.56□□□□□ -0.88
PTPRA-203ENST00000356147 PEPDP12955 493 aa9.56□□□□□ -0.88
PTPRA-203ENST00000356147 ELAVL2Q12926 359 aaKnown RBP9.56□□□□□ -0.88
PTPRA-203ENST00000356147 OCLNQ16625 522 aa9.56□□□□□ -0.88
PTPRA-203ENST00000356147 KLHL22Q53GT1 634 aa9.56□□□□□ -0.88
PTPRA-203ENST00000356147 GAREM2Q75VX8 874 aa9.56□□□□□ -0.88
PTPRA-203ENST00000356147 PRICKLE2Q7Z3G6 844 aa9.56□□□□□ -0.88
PTPRA-203ENST00000356147 FAM26EQ8N5C1 309 aa9.56□□□□□ -0.88
PTPRA-203ENST00000356147 TMEM163Q8TC26 289 aa9.56□□□□□ -0.88
PTPRA-203ENST00000356147 ZNF431Q8TF32 576 aaPredicted RBP9.56□□□□□ -0.88
PTPRA-203ENST00000356147 C2orf15Q8WU43 125 aaKnown RBP9.56□□□□□ -0.88
PTPRA-203ENST00000356147 SLC5A11Q8WWX8 675 aa9.56□□□□□ -0.88
PTPRA-203ENST00000356147 AKAP1Q92667 903 aaKnown RBP eCLIP9.56□□□□□ -0.88
PTPRA-203ENST00000356147 AP2M1Q96CW1 435 aa9.56□□□□□ -0.88
PTPRA-203ENST00000356147 MSANTD3Q96H12 275 aa9.56□□□□□ -0.88
PTPRA-203ENST00000356147 MAGEB10Q96LZ2 347 aaPredicted RBP9.56□□□□□ -0.88
PTPRA-203ENST00000356147 DPCDQ9BVM2 203 aaPredicted RBP9.56□□□□□ -0.88
PTPRA-203ENST00000356147 POLDIP3Q9BY77 421 aaKnown RBP9.56□□□□□ -0.88
PTPRA-203ENST00000356147 ABCG5Q9H222 651 aa9.56□□□□□ -0.88
PTPRA-203ENST00000356147 OR51I1Q9H343 314 aa9.56□□□□□ -0.88
PTPRA-203ENST00000356147 MYNNQ9NPC7 610 aa9.56□□□□□ -0.88
PTPRA-203ENST00000356147 EQTNQ9NQ60 294 aa9.56□□□□□ -0.88
PTPRA-203ENST00000356147 MAN2C1Q9NTJ4 1040 aa9.56□□□□□ -0.88
PTPRA-203ENST00000356147 CUEDC1Q9NWM3 386 aaPredicted RBP9.56□□□□□ -0.88
PTPRA-203ENST00000356147 STOML2Q9UJZ1 356 aa9.56□□□□□ -0.88
PTPRA-203ENST00000356147 LSM7Q9UK45 103 aaKnown RBP9.56□□□□□ -0.88
PTPRA-203ENST00000356147 SLC9A8Q9Y2E8 581 aa9.56□□□□□ -0.88
PTPRA-203ENST00000356147 SLC5A10A0PJK1 596 aa9.55□□□□□ -0.88
PTPRA-203ENST00000356147 POP4O95707 220 aaKnown RBP9.55□□□□□ -0.88
PTPRA-203ENST00000356147 EPPINO95925 133 aa9.55□□□□□ -0.88
PTPRA-203ENST00000356147 C8orf89P0DMQ9 161 aa9.55□□□□□ -0.88
PTPRA-203ENST00000356147 GNSP15586 552 aa9.55□□□□□ -0.88
PTPRA-203ENST00000356147 GPR4P46093 362 aa9.55□□□□□ -0.88
PTPRA-203ENST00000356147 CCT3P49368 545 aaKnown RBP9.55□□□□□ -0.88
PTPRA-203ENST00000356147 CDH11P55287 796 aa9.55□□□□□ -0.88
PTPRA-203ENST00000356147 STXBP1P61764 594 aaKnown RBP9.55□□□□□ -0.88
PTPRA-203ENST00000356147 KCNC3Q14003 757 aa9.55□□□□□ -0.88
PTPRA-203ENST00000356147 ESCO2Q56NI9 601 aa9.55□□□□□ -0.88
PTPRA-203ENST00000356147 HIST2H2AA3Q6FI13 130 aa9.55□□□□□ -0.88
PTPRA-203ENST00000356147 RAET1GQ6H3X3 334 aa9.55□□□□□ -0.88
PTPRA-203ENST00000356147 TMEM91Q6ZNR0 172 aa9.55□□□□□ -0.88
PTPRA-203ENST00000356147 SYT9Q86SS6 491 aa9.55□□□□□ -0.88
PTPRA-203ENST00000356147 OR11H7Q8NGC8 314 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms