RNA–Protein interactions for RNA: ENST00000355841.6

PDLIM7-202, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,689 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-202ENST00000355841 CATSPER1Q8NEC5 780 aa16.55■□□□□ 0.24
PDLIM7-202ENST00000355841 VPS37AQ8NEZ2 397 aa16.55■□□□□ 0.24
PDLIM7-202ENST00000355841 NUP43Q8NFH3 380 aa16.55■□□□□ 0.24
PDLIM7-202ENST00000355841 NUBPLQ8TB37 319 aa16.55■□□□□ 0.24
PDLIM7-202ENST00000355841 ERP27Q96DN0 273 aa16.55■□□□□ 0.24
PDLIM7-202ENST00000355841 RASL10BQ96S79 203 aa16.55■□□□□ 0.24
PDLIM7-202ENST00000355841 NMUR2Q9GZQ4 415 aa16.55■□□□□ 0.24
PDLIM7-202ENST00000355841 NXF5Q9H1B4 397 aaKnown RBP16.55■□□□□ 0.24
PDLIM7-202ENST00000355841 EPS8L2Q9H6S3 715 aa16.55■□□□□ 0.24
PDLIM7-202ENST00000355841 FOLH1BQ9HBA9 442 aa16.55■□□□□ 0.24
PDLIM7-202ENST00000355841 SAR1AQ9NR31 198 aa16.55■□□□□ 0.24
PDLIM7-202ENST00000355841 ZCCHC3Q9NUD5 404 aaKnown RBP16.55■□□□□ 0.24
PDLIM7-202ENST00000355841 TAS2R9Q9NYW1 312 aa16.55■□□□□ 0.24
PDLIM7-202ENST00000355841 TUBD1Q9UJT1 453 aa16.55■□□□□ 0.24
PDLIM7-202ENST00000355841 ZNF451Q9Y4E5 1061 aa16.55■□□□□ 0.24
PDLIM7-202ENST00000355841 SLITRK5O94991 958 aa16.54■□□□□ 0.24
PDLIM7-202ENST00000355841 PSMG1O95456 288 aa16.54■□□□□ 0.24
PDLIM7-202ENST00000355841 C1QCP02747 245 aa16.54■□□□□ 0.24
PDLIM7-202ENST00000355841 GSNP06396 782 aa16.54■□□□□ 0.24
PDLIM7-202ENST00000355841 CDKN2CP42773 168 aa16.54■□□□□ 0.24
PDLIM7-202ENST00000355841 KCNK10P57789 538 aa16.54■□□□□ 0.24
PDLIM7-202ENST00000355841 ZNF155Q12901 538 aaPredicted RBP16.54■□□□□ 0.24
PDLIM7-202ENST00000355841 RCAN2Q14206 197 aa16.54■□□□□ 0.24
PDLIM7-202ENST00000355841 DNAJC14Q6Y2X3 702 aaPredicted RBP16.54■□□□□ 0.24
PDLIM7-202ENST00000355841 ARMC10Q8N2F6 343 aa16.54■□□□□ 0.24
PDLIM7-202ENST00000355841 ZNF441Q8N8Z8 693 aa16.54■□□□□ 0.24
PDLIM7-202ENST00000355841 FBXO30Q8TB52 745 aa16.54■□□□□ 0.24
PDLIM7-202ENST00000355841 OTUB1Q96FW1 271 aaPredicted RBP16.54■□□□□ 0.24
PDLIM7-202ENST00000355841 VSTM2LQ96N03 204 aa16.54■□□□□ 0.24
PDLIM7-202ENST00000355841 BBC3Q96PG8 261 aaPredicted RBP16.54■□□□□ 0.24
PDLIM7-202ENST00000355841 LMF1Q96S06 567 aa16.54■□□□□ 0.24
PDLIM7-202ENST00000355841 YIPF4Q9BSR8 244 aa16.54■□□□□ 0.24
PDLIM7-202ENST00000355841 SLC25A18Q9H1K4 315 aa16.54■□□□□ 0.24
PDLIM7-202ENST00000355841 ARMCX1Q9P291 453 aa16.54■□□□□ 0.24
PDLIM7-202ENST00000355841 PRODH2Q9UF12 536 aa16.54■□□□□ 0.24
PDLIM7-202ENST00000355841 PCDHGB4Q9UN71 923 aa16.54■□□□□ 0.24
PDLIM7-202ENST00000355841 CNTRLQ7Z7A1 2325 aa16.54■□□□□ 0.24
PDLIM7-202ENST00000355841 NUP214P35658 2090 aaPredicted RBP16.53■□□□□ 0.24
PDLIM7-202ENST00000355841 ASPDHA6ND91 283 aa16.53■□□□□ 0.24
PDLIM7-202ENST00000355841 CCDC154A6NI56 674 aa16.53■□□□□ 0.24
PDLIM7-202ENST00000355841 FCHO1O14526 889 aa16.53■□□□□ 0.24
PDLIM7-202ENST00000355841 EMC8O43402 210 aa16.53■□□□□ 0.24
PDLIM7-202ENST00000355841 SHOX2O60902 331 aaPredicted RBP16.53■□□□□ 0.24
PDLIM7-202ENST00000355841 BCAS2O75934 225 aaPredicted RBP16.53■□□□□ 0.24
PDLIM7-202ENST00000355841 CAPN3P20807 821 aa16.53■□□□□ 0.24
PDLIM7-202ENST00000355841 SOX3P41225 446 aa16.53■□□□□ 0.24
PDLIM7-202ENST00000355841 CCT3P49368 545 aaKnown RBP16.53■□□□□ 0.24
PDLIM7-202ENST00000355841 ARG2P78540 354 aa16.53■□□□□ 0.24
PDLIM7-202ENST00000355841 OC90Q02509 493 aaPredicted RBP16.53■□□□□ 0.24
PDLIM7-202ENST00000355841 GAB1Q13480 694 aa16.53■□□□□ 0.24
PDLIM7-202ENST00000355841 TP53BP2Q13625 1128 aa16.53■□□□□ 0.24
PDLIM7-202ENST00000355841 SLC2A7Q6PXP3 512 aa16.53■□□□□ 0.24
PDLIM7-202ENST00000355841 IGFL2Q6UWQ7 119 aa16.53■□□□□ 0.24
PDLIM7-202ENST00000355841 PRR22Q8IZ63 422 aa16.53■□□□□ 0.24
PDLIM7-202ENST00000355841 CPSF7Q8N684 471 aaKnown RBP16.53■□□□□ 0.24
PDLIM7-202ENST00000355841 PSMA8Q8TAA3 256 aa16.53■□□□□ 0.24
PDLIM7-202ENST00000355841 SPDL1Q96EA4 605 aa16.53■□□□□ 0.24
PDLIM7-202ENST00000355841 C16orf58Q96GQ5 468 aa16.53■□□□□ 0.24
PDLIM7-202ENST00000355841 CCDC115Q96NT0 180 aa16.53■□□□□ 0.24
PDLIM7-202ENST00000355841 PANX1Q96RD7 426 aa16.53■□□□□ 0.24
PDLIM7-202ENST00000355841 UBL7Q96S82 380 aaPredicted RBP16.53■□□□□ 0.24
PDLIM7-202ENST00000355841 CCT8L2Q96SF2 557 aa16.53■□□□□ 0.24
PDLIM7-202ENST00000355841 C3orf14Q9HBI5 128 aa16.53■□□□□ 0.24
PDLIM7-202ENST00000355841 NEUROD4Q9HD90 331 aa16.53■□□□□ 0.24
PDLIM7-202ENST00000355841 SLC52A3Q9NQ40 469 aa16.53■□□□□ 0.24
PDLIM7-202ENST00000355841 SERHLQ9NQF3 203 aa16.53■□□□□ 0.24
PDLIM7-202ENST00000355841 SLC6A13Q9NSD5 602 aa16.53■□□□□ 0.24
PDLIM7-202ENST00000355841 YARS2Q9Y2Z4 477 aaKnown RBP16.53■□□□□ 0.24
PDLIM7-202ENST00000355841 KALRNO60229 2985 aa16.53■□□□□ 0.24
PDLIM7-202ENST00000355841 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.53■□□□□ 0.24
PDLIM7-202ENST00000355841 DYTNA2CJ06 578 aa16.53■□□□□ 0.24
PDLIM7-202ENST00000355841 COQ9O75208 318 aa16.53■□□□□ 0.24
PDLIM7-202ENST00000355841 OR6B1O95007 311 aa16.53■□□□□ 0.24
PDLIM7-202ENST00000355841 NADKO95544 446 aaPredicted RBP16.53■□□□□ 0.24
PDLIM7-202ENST00000355841 CD96P40200 585 aa16.53■□□□□ 0.24
PDLIM7-202ENST00000355841 SSR4P51571 173 aa16.53■□□□□ 0.24
PDLIM7-202ENST00000355841 CASP9P55211 416 aa16.53■□□□□ 0.24
PDLIM7-202ENST00000355841 TUBA3CQ13748 450 aa16.53■□□□□ 0.24
PDLIM7-202ENST00000355841 PIGGQ5H8A4 983 aa16.53■□□□□ 0.24
PDLIM7-202ENST00000355841 TUBA3EQ6PEY2 450 aa16.53■□□□□ 0.24
PDLIM7-202ENST00000355841 NPSR1Q6W5P4 371 aa16.53■□□□□ 0.24
PDLIM7-202ENST00000355841 PTRH1Q86Y79 214 aaKnown RBP16.53■□□□□ 0.24
PDLIM7-202ENST00000355841 LGI4Q8N135 537 aa16.53■□□□□ 0.24
PDLIM7-202ENST00000355841 TMEM156Q8N614 296 aa16.53■□□□□ 0.24
PDLIM7-202ENST00000355841 RBMXL3Q8N7X1 1067 aaKnown RBP16.53■□□□□ 0.24
PDLIM7-202ENST00000355841 GIMAP5Q96F15 307 aa16.53■□□□□ 0.24
PDLIM7-202ENST00000355841 SIGLEC12Q96PQ1 595 aa16.53■□□□□ 0.24
PDLIM7-202ENST00000355841 LUZP4Q9P127 313 aa16.53■□□□□ 0.24
PDLIM7-202ENST00000355841 ABI3Q9P2A4 366 aa16.53■□□□□ 0.24
PDLIM7-202ENST00000355841 BTNL2Q9UIR0 455 aa16.53■□□□□ 0.24
PDLIM7-202ENST00000355841 CFL2Q9Y281 166 aa16.53■□□□□ 0.24
PDLIM7-202ENST00000355841 ERICH4A6NGS2 130 aa16.52■□□□□ 0.23
PDLIM7-202ENST00000355841 ATXN7O15265 892 aaPredicted RBP16.52■□□□□ 0.23
PDLIM7-202ENST00000355841 ERN1O75460 977 aaKnown RBP16.52■□□□□ 0.23
PDLIM7-202ENST00000355841 HMGN2P05204 90 aaKnown RBP16.52■□□□□ 0.23
PDLIM7-202ENST00000355841 CT45A8P0DMV1 189 aa16.52■□□□□ 0.23
PDLIM7-202ENST00000355841 CT45A9P0DMV2 189 aa16.52■□□□□ 0.23
PDLIM7-202ENST00000355841 RPS26P62854 115 aaKnown RBP16.52■□□□□ 0.23
PDLIM7-202ENST00000355841 PRR5P85299 388 aa16.52■□□□□ 0.23
PDLIM7-202ENST00000355841 MAPKAPK3Q16644 382 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms