RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 SNRPGP62308 76 aaKnown RBP14.01□□□□□ -0.17
VIPAS39-202ENST00000343765 MLLT1Q03111 559 aaPredicted RBP14.01□□□□□ -0.17
VIPAS39-202ENST00000343765 GINS1Q14691 196 aa14.01□□□□□ -0.17
VIPAS39-202ENST00000343765 TMEM31Q5JXX7 168 aa14.01□□□□□ -0.17
VIPAS39-202ENST00000343765 MRM1Q6IN84 353 aaKnown RBP14.01□□□□□ -0.17
VIPAS39-202ENST00000343765 SLC48A1Q6P1K1 146 aa14.01□□□□□ -0.17
VIPAS39-202ENST00000343765 ENPP7Q6UWV6 458 aa14.01□□□□□ -0.17
VIPAS39-202ENST00000343765 UBE2Q1Q7Z7E8 422 aa14.01□□□□□ -0.17
VIPAS39-202ENST00000343765 ATCAYQ86WG3 371 aa14.01□□□□□ -0.17
VIPAS39-202ENST00000343765 VRK2Q86Y07 508 aa14.01□□□□□ -0.17
VIPAS39-202ENST00000343765 ZCCHC10Q8TBK6 192 aa14.01□□□□□ -0.17
VIPAS39-202ENST00000343765 OR7D2Q96RA2 312 aa14.01□□□□□ -0.17
VIPAS39-202ENST00000343765 RERGLQ9H628 205 aa14.01□□□□□ -0.17
VIPAS39-202ENST00000343765 EGLN3Q9H6Z9 239 aa14.01□□□□□ -0.17
VIPAS39-202ENST00000343765 QPCTLQ9NXS2 382 aa14.01□□□□□ -0.17
VIPAS39-202ENST00000343765 GPR55Q9Y2T6 319 aaPredicted RBP14.01□□□□□ -0.17
VIPAS39-202ENST00000343765 CAB39Q9Y376 341 aaPredicted RBP14.01□□□□□ -0.17
VIPAS39-202ENST00000343765 CPSF4LA6NMK7 179 aaKnown RBP14□□□□□ -0.17
VIPAS39-202ENST00000343765 CSO75390 466 aaKnown RBP14□□□□□ -0.17
VIPAS39-202ENST00000343765 GPX5O75715 221 aa14□□□□□ -0.17
VIPAS39-202ENST00000343765 LGI1O95970 557 aa14□□□□□ -0.17
VIPAS39-202ENST00000343765 CHRM5P08912 532 aaPredicted RBP14□□□□□ -0.17
VIPAS39-202ENST00000343765 COL9A1P20849 921 aa14□□□□□ -0.17
VIPAS39-202ENST00000343765 CHRNEQ04844 493 aa14□□□□□ -0.17
VIPAS39-202ENST00000343765 ACSM5Q6NUN0 579 aa14□□□□□ -0.17
VIPAS39-202ENST00000343765 FAM92BQ6ZTR7 304 aa14□□□□□ -0.17
VIPAS39-202ENST00000343765 AMIGO1Q86WK6 493 aa14□□□□□ -0.17
VIPAS39-202ENST00000343765 NUP43Q8NFH3 380 aa14□□□□□ -0.17
VIPAS39-202ENST00000343765 TSACCQ96A04 125 aaPredicted RBP14□□□□□ -0.17
VIPAS39-202ENST00000343765 TMEM80Q96HE8 168 aa14□□□□□ -0.17
VIPAS39-202ENST00000343765 OR2M4Q96R27 311 aa14□□□□□ -0.17
VIPAS39-202ENST00000343765 PNMA8CA0A1B0GUJ8 204 aa14□□□□□ -0.17
VIPAS39-202ENST00000343765 ZNF888P0CJ79 500 aaPredicted RBP14□□□□□ -0.17
VIPAS39-202ENST00000343765 TEAD1P28347 426 aa14□□□□□ -0.17
VIPAS39-202ENST00000343765 CSTF2P33240 577 aaKnown RBP eCLIP14□□□□□ -0.17
VIPAS39-202ENST00000343765 AHRP35869 848 aa14□□□□□ -0.17
VIPAS39-202ENST00000343765 AVPR1BP47901 424 aa14□□□□□ -0.17
VIPAS39-202ENST00000343765 TAS2R41P59536 307 aa14□□□□□ -0.17
VIPAS39-202ENST00000343765 ABATP80404 500 aa14□□□□□ -0.17
VIPAS39-202ENST00000343765 PRR5P85299 388 aa14□□□□□ -0.17
VIPAS39-202ENST00000343765 MAP4K2Q12851 820 aa14□□□□□ -0.17
VIPAS39-202ENST00000343765 ZNF311Q5JNZ3 666 aa14□□□□□ -0.17
VIPAS39-202ENST00000343765 BHLHB9Q6PI77 547 aa14□□□□□ -0.17
VIPAS39-202ENST00000343765 OR8J1Q8NGP2 316 aa14□□□□□ -0.17
VIPAS39-202ENST00000343765 OR1E3Q8WZA6 343 aa14□□□□□ -0.17
VIPAS39-202ENST00000343765 SPATA5L1Q9BVQ7 753 aa14□□□□□ -0.17
VIPAS39-202ENST00000343765 C1QTNF7Q9BXJ2 289 aa14□□□□□ -0.17
VIPAS39-202ENST00000343765 PLA2G12AQ9BZM1 189 aa14□□□□□ -0.17
VIPAS39-202ENST00000343765 RMI1Q9H9A7 625 aa14□□□□□ -0.17
VIPAS39-202ENST00000343765 ANKHQ9HCJ1 492 aa14□□□□□ -0.17
VIPAS39-202ENST00000343765 HHATLQ9HCP6 504 aa14□□□□□ -0.17
VIPAS39-202ENST00000343765 GIMAP4Q9NUV9 329 aa14□□□□□ -0.17
VIPAS39-202ENST00000343765 SLC13A4Q9UKG4 626 aa14□□□□□ -0.17
VIPAS39-202ENST00000343765 NTNG1Q9Y2I2 539 aa14□□□□□ -0.17
VIPAS39-202ENST00000343765 KLK4Q9Y5K2 254 aa14□□□□□ -0.17
VIPAS39-202ENST00000343765 ATG2AQ2TAZ0 1938 aa14□□□□□ -0.17
VIPAS39-202ENST00000343765 GUCY1B2O75343 617 aa14□□□□□ -0.17
VIPAS39-202ENST00000343765 UPK1BO75841 260 aa14□□□□□ -0.17
VIPAS39-202ENST00000343765 ALOX12P18054 663 aa14□□□□□ -0.17
VIPAS39-202ENST00000343765 MPIP34949 423 aa14□□□□□ -0.17
VIPAS39-202ENST00000343765 C6orf132Q5T0Z8 1188 aa14□□□□□ -0.17
VIPAS39-202ENST00000343765 TMEM64Q6YI46 380 aa14□□□□□ -0.17
VIPAS39-202ENST00000343765 OR4N5Q8IXE1 308 aa14□□□□□ -0.17
VIPAS39-202ENST00000343765 CADM3Q8N126 398 aa14□□□□□ -0.17
VIPAS39-202ENST00000343765 OR56A1Q8NGH5 318 aa14□□□□□ -0.17
VIPAS39-202ENST00000343765 LRR1Q96L50 414 aa14□□□□□ -0.17
VIPAS39-202ENST00000343765 PRRC1Q96M27 445 aa14□□□□□ -0.17
VIPAS39-202ENST00000343765 DZANK1Q9NVP4 752 aa14□□□□□ -0.17
VIPAS39-202ENST00000343765 CNIH4Q9P003 139 aa14□□□□□ -0.17
VIPAS39-202ENST00000343765 CCDC59Q9P031 241 aaKnown RBP14□□□□□ -0.17
VIPAS39-202ENST00000343765 CES1P1Q9UKY3 287 aa14□□□□□ -0.17
VIPAS39-202ENST00000343765 GPR52Q9Y2T5 361 aa14□□□□□ -0.17
VIPAS39-202ENST00000343765 RPL36Q9Y3U8 105 aaKnown RBP14□□□□□ -0.17
VIPAS39-202ENST00000343765 ZNF780BQ9Y6R6 833 aa14□□□□□ -0.17
VIPAS39-202ENST00000343765 WDR87Q6ZQQ6 2873 aa13.99□□□□□ -0.17
VIPAS39-202ENST00000343765 PRR19A6NJB7 356 aa13.99□□□□□ -0.17
VIPAS39-202ENST00000343765 PROM1O43490 865 aa13.99□□□□□ -0.17
VIPAS39-202ENST00000343765 ADAM23O75077 832 aa13.99□□□□□ -0.17
VIPAS39-202ENST00000343765 PIPP12273 146 aaPredicted RBP13.99□□□□□ -0.17
VIPAS39-202ENST00000343765 HOXB2P14652 356 aa13.99□□□□□ -0.17
VIPAS39-202ENST00000343765 PCYT1AP49585 367 aa13.99□□□□□ -0.17
VIPAS39-202ENST00000343765 ANXA11P50995 505 aaKnown RBP13.99□□□□□ -0.17
VIPAS39-202ENST00000343765 SHHQ15465 462 aa13.99□□□□□ -0.17
VIPAS39-202ENST00000343765 SPHARQ15513 63 aa13.99□□□□□ -0.17
VIPAS39-202ENST00000343765 CLEC12AQ5QGZ9 265 aa13.99□□□□□ -0.17
VIPAS39-202ENST00000343765 MFSD4BQ5TF39 518 aa13.99□□□□□ -0.17
VIPAS39-202ENST00000343765 STEAP3Q658P3 488 aa13.99□□□□□ -0.17
VIPAS39-202ENST00000343765 MTSS1LQ765P7 747 aa13.99□□□□□ -0.17
VIPAS39-202ENST00000343765 C16orf62Q7Z3J2 963 aa13.99□□□□□ -0.17
VIPAS39-202ENST00000343765 LYSMD2Q8IV50 215 aa13.99□□□□□ -0.17
VIPAS39-202ENST00000343765 PARP16Q8N5Y8 322 aa13.99□□□□□ -0.17
VIPAS39-202ENST00000343765 POC5Q8NA72 575 aa13.99□□□□□ -0.17
VIPAS39-202ENST00000343765 MFSD9Q8NBP5 474 aa13.99□□□□□ -0.17
VIPAS39-202ENST00000343765 MORN4Q8NDC4 146 aa13.99□□□□□ -0.17
VIPAS39-202ENST00000343765 SIMC1Q8NDZ2 872 aa13.99□□□□□ -0.17
VIPAS39-202ENST00000343765 COLEC10Q9Y6Z7 277 aa13.99□□□□□ -0.17
VIPAS39-202ENST00000343765 EMC8O43402 210 aa13.99□□□□□ -0.17
VIPAS39-202ENST00000343765 KLF8O95600 359 aaPredicted RBP13.99□□□□□ -0.17
VIPAS39-202ENST00000343765 LAMP2P13473 410 aa13.99□□□□□ -0.17
VIPAS39-202ENST00000343765 NTSR1P30989 418 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms