RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 CASP9P55211 416 aa13.76□□□□□ -0.21
CXCL12-201ENST00000343575 SKP1P63208 163 aa13.76□□□□□ -0.21
CXCL12-201ENST00000343575 BTG2P78543 158 aa13.76□□□□□ -0.21
CXCL12-201ENST00000343575 NFATC3Q12968 1075 aa13.76□□□□□ -0.21
CXCL12-201ENST00000343575 RGNQ15493 299 aa13.76□□□□□ -0.21
CXCL12-201ENST00000343575 CCDC157Q569K6 752 aa13.76□□□□□ -0.21
CXCL12-201ENST00000343575 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.76□□□□□ -0.21
CXCL12-201ENST00000343575 C1orf189Q5VU69 101 aa13.76□□□□□ -0.21
CXCL12-201ENST00000343575 YOD1Q5VVQ6 348 aaPredicted RBP13.76□□□□□ -0.21
CXCL12-201ENST00000343575 CDCP2Q5VXM1 449 aa13.76□□□□□ -0.21
CXCL12-201ENST00000343575 CPZQ66K79 652 aa13.76□□□□□ -0.21
CXCL12-201ENST00000343575 KCTD8Q6ZWB6 473 aa13.76□□□□□ -0.21
CXCL12-201ENST00000343575 USP51Q70EK9 711 aa13.76□□□□□ -0.21
CXCL12-201ENST00000343575 MED25Q71SY5 747 aa13.76□□□□□ -0.21
CXCL12-201ENST00000343575 FKBP9P1Q75LS8 142 aa13.76□□□□□ -0.21
CXCL12-201ENST00000343575 PAPD5Q8NDF8 572 aaKnown RBP13.76□□□□□ -0.21
CXCL12-201ENST00000343575 AGBL5Q8NDL9 886 aa13.76□□□□□ -0.21
CXCL12-201ENST00000343575 SIMC1Q8NDZ2 872 aa13.76□□□□□ -0.21
CXCL12-201ENST00000343575 OR9A2Q8NGT5 310 aa13.76□□□□□ -0.21
CXCL12-201ENST00000343575 FAM120BQ96EK7 910 aaKnown RBP13.76□□□□□ -0.21
CXCL12-201ENST00000343575 CTRCQ99895 268 aa13.76□□□□□ -0.21
CXCL12-201ENST00000343575 SH3GL1Q99961 368 aa13.76□□□□□ -0.21
CXCL12-201ENST00000343575 KCTD14Q9BQ13 255 aaPredicted RBP13.76□□□□□ -0.21
CXCL12-201ENST00000343575 ANKRA2Q9H9E1 313 aa13.76□□□□□ -0.21
CXCL12-201ENST00000343575 NEUROD4Q9HD90 331 aa13.76□□□□□ -0.21
CXCL12-201ENST00000343575 NDOR1Q9UHB4 597 aa13.76□□□□□ -0.21
CXCL12-201ENST00000343575 PSME2Q9UL46 239 aa13.76□□□□□ -0.21
CXCL12-201ENST00000343575 CLCA2Q9UQC9 943 aa13.76□□□□□ -0.21
CXCL12-201ENST00000343575 ZNF292O60281 2723 aa13.76□□□□□ -0.21
CXCL12-201ENST00000343575 A0A1W2PPW3 197 aa13.76□□□□□ -0.21
CXCL12-201ENST00000343575 TMEM247A6NEH6 219 aa13.76□□□□□ -0.21
CXCL12-201ENST00000343575 RFPL3O75679 317 aa13.76□□□□□ -0.21
CXCL12-201ENST00000343575 CDC123O75794 336 aaPredicted RBP13.76□□□□□ -0.21
CXCL12-201ENST00000343575 CLPXO76031 633 aa13.76□□□□□ -0.21
CXCL12-201ENST00000343575 KCNK5O95279 499 aa13.76□□□□□ -0.21
CXCL12-201ENST00000343575 NUDT7P0C024 238 aa13.76□□□□□ -0.21
CXCL12-201ENST00000343575 CPMP14384 443 aa13.76□□□□□ -0.21
CXCL12-201ENST00000343575 DDX5P17844 614 aaKnown RBP13.76□□□□□ -0.21
CXCL12-201ENST00000343575 UQCRC2P22695 453 aa13.76□□□□□ -0.21
CXCL12-201ENST00000343575 HTR1EP28566 365 aa13.76□□□□□ -0.21
CXCL12-201ENST00000343575 NTSP30990 170 aa13.76□□□□□ -0.21
CXCL12-201ENST00000343575 MPIP34949 423 aa13.76□□□□□ -0.21
CXCL12-201ENST00000343575 BMXP51813 675 aa13.76□□□□□ -0.21
CXCL12-201ENST00000343575 ILKQ13418 452 aa13.76□□□□□ -0.21
CXCL12-201ENST00000343575 DSG2Q14126 1118 aa13.76□□□□□ -0.21
CXCL12-201ENST00000343575 SAXO2Q658L1 398 aa13.76□□□□□ -0.21
CXCL12-201ENST00000343575 ZNF385CQ66K41 422 aaPredicted RBP13.76□□□□□ -0.21
CXCL12-201ENST00000343575 COX15Q7KZN9 410 aa13.76□□□□□ -0.21
CXCL12-201ENST00000343575 PTOV1Q86YD1 416 aa13.76□□□□□ -0.21
CXCL12-201ENST00000343575 TMEM151BQ8IW70 566 aa13.76□□□□□ -0.21
CXCL12-201ENST00000343575 SCAIQ8N9R8 606 aa13.76□□□□□ -0.21
CXCL12-201ENST00000343575 CYGBQ8WWM9 190 aa13.76□□□□□ -0.21
CXCL12-201ENST00000343575 TBC1D20Q96BZ9 403 aa13.76□□□□□ -0.21
CXCL12-201ENST00000343575 DPH2Q9BQC3 489 aaPredicted RBP13.76□□□□□ -0.21
CXCL12-201ENST00000343575 NEURL2Q9BR09 285 aa13.76□□□□□ -0.21
CXCL12-201ENST00000343575 SERHL2Q9H4I8 314 aa13.76□□□□□ -0.21
CXCL12-201ENST00000343575 TMEM165Q9HC07 324 aa13.76□□□□□ -0.21
CXCL12-201ENST00000343575 INIPQ9NRY2 104 aa13.76□□□□□ -0.21
CXCL12-201ENST00000343575 ENTPD4Q9Y227 616 aa13.76□□□□□ -0.21
CXCL12-201ENST00000343575 MAP4K5Q9Y4K4 846 aa13.76□□□□□ -0.21
CXCL12-201ENST00000343575 PCDHB3Q9Y5E6 796 aa13.76□□□□□ -0.21
CXCL12-201ENST00000343575 SNX8Q9Y5X2 465 aa13.76□□□□□ -0.21
CXCL12-201ENST00000343575 ZNF780BQ9Y6R6 833 aa13.76□□□□□ -0.21
CXCL12-201ENST00000343575 SPACA6W5XKT8 324 aa13.76□□□□□ -0.21
CXCL12-201ENST00000343575 PMS2P1A4D2B8 440 aa13.75□□□□□ -0.21
CXCL12-201ENST00000343575 SEC14L2O76054 403 aa13.75□□□□□ -0.21
CXCL12-201ENST00000343575 FHP07954 510 aa13.75□□□□□ -0.21
CXCL12-201ENST00000343575 ALOX5P09917 674 aa13.75□□□□□ -0.21
CXCL12-201ENST00000343575 ATXN8OSP0DMR3 200 aa13.75□□□□□ -0.21
CXCL12-201ENST00000343575 NCK1P16333 377 aa13.75□□□□□ -0.21
CXCL12-201ENST00000343575 TMED10P49755 219 aaKnown RBP13.75□□□□□ -0.21
CXCL12-201ENST00000343575 RPS3AP61247 264 aaKnown RBP13.75□□□□□ -0.21
CXCL12-201ENST00000343575 IGLV3-21P80748 117 aaPredicted RBP13.75□□□□□ -0.21
CXCL12-201ENST00000343575 ABHD18Q0P651 414 aa13.75□□□□□ -0.21
CXCL12-201ENST00000343575 ANKDD1AQ495B1 522 aa13.75□□□□□ -0.21
CXCL12-201ENST00000343575 BROXQ5VW32 411 aa13.75□□□□□ -0.21
CXCL12-201ENST00000343575 DGAT2L6Q6ZPD8 337 aa13.75□□□□□ -0.21
CXCL12-201ENST00000343575 ASCL5Q7RTU5 278 aa13.75□□□□□ -0.21
CXCL12-201ENST00000343575 SERPINA11Q86U17 422 aa13.75□□□□□ -0.21
CXCL12-201ENST00000343575 SLCO6A1Q86UG4 719 aa13.75□□□□□ -0.21
CXCL12-201ENST00000343575 RNF130Q86XS8 419 aa13.75□□□□□ -0.21
CXCL12-201ENST00000343575 EPHX4Q8IUS5 362 aa13.75□□□□□ -0.21
CXCL12-201ENST00000343575 ADGRG5Q8IZF4 528 aa13.75□□□□□ -0.21
CXCL12-201ENST00000343575 LRRC25Q8N386 305 aaPredicted RBP13.75□□□□□ -0.21
CXCL12-201ENST00000343575 OR2T12Q8NG77 320 aa13.75□□□□□ -0.21
CXCL12-201ENST00000343575 NEURL3Q96EH8 262 aa13.75□□□□□ -0.21
CXCL12-201ENST00000343575 BCL7BQ9BQE9 202 aa13.75□□□□□ -0.21
CXCL12-201ENST00000343575 ZNF304Q9HCX3 659 aa13.75□□□□□ -0.21
CXCL12-201ENST00000343575 ZNF639Q9UID6 485 aa13.75□□□□□ -0.21
CXCL12-201ENST00000343575 SRPK3Q9UPE1 567 aa13.75□□□□□ -0.21
CXCL12-201ENST00000343575 AURKCQ9UQB9 309 aa13.75□□□□□ -0.21
CXCL12-201ENST00000343575 KNTC1P50748 2209 aa13.75□□□□□ -0.21
CXCL12-201ENST00000343575 A0A1W2PNU3 283 aaPredicted RBP13.74□□□□□ -0.21
CXCL12-201ENST00000343575 HTR3EA5X5Y0 456 aa13.74□□□□□ -0.21
CXCL12-201ENST00000343575 EVPLLA8MZ36 301 aa13.74□□□□□ -0.21
CXCL12-201ENST00000343575 ARPC2O15144 300 aa13.74□□□□□ -0.21
CXCL12-201ENST00000343575 CTNSO60931 367 aa13.74□□□□□ -0.21
CXCL12-201ENST00000343575 TNFRSF21O75509 655 aa13.74□□□□□ -0.21
CXCL12-201ENST00000343575 SCRG1O75711 98 aa13.74□□□□□ -0.21
CXCL12-201ENST00000343575 ATP1B1P05026 303 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms