RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 HSH2DQ96JZ2 352 aa16.21■□□□□ 0.19
CLDN4-201ENST00000340958 ZNF607Q96SK3 696 aa16.21■□□□□ 0.19
CLDN4-201ENST00000340958 CNPPD1Q9BV87 410 aa16.21■□□□□ 0.19
CLDN4-201ENST00000340958 KLHL4Q9C0H6 718 aa16.21■□□□□ 0.19
CLDN4-201ENST00000340958 STRADBQ9C0K7 418 aa16.21■□□□□ 0.19
CLDN4-201ENST00000340958 MAGIXQ9H6Y5 334 aa16.21■□□□□ 0.19
CLDN4-201ENST00000340958 NECTIN3Q9NQS3 549 aa16.21■□□□□ 0.19
CLDN4-201ENST00000340958 PNO1Q9NRX1 252 aaKnown RBP16.21■□□□□ 0.19
CLDN4-201ENST00000340958 PLOD3O60568 738 aa16.2■□□□□ 0.18
CLDN4-201ENST00000340958 NME6O75414 186 aaPredicted RBP16.2■□□□□ 0.18
CLDN4-201ENST00000340958 RFPL3O75679 317 aa16.2■□□□□ 0.18
CLDN4-201ENST00000340958 AGR2O95994 175 aa16.2■□□□□ 0.18
CLDN4-201ENST00000340958 LDLRP01130 860 aa16.2■□□□□ 0.18
CLDN4-201ENST00000340958 CT62P0C5K7 136 aa16.2■□□□□ 0.18
CLDN4-201ENST00000340958 CRISP3P54108 245 aa16.2■□□□□ 0.18
CLDN4-201ENST00000340958 DCDP81605 110 aaKnown RBP16.2■□□□□ 0.18
CLDN4-201ENST00000340958 EEF1A2Q05639 463 aaKnown RBP16.2■□□□□ 0.18
CLDN4-201ENST00000340958 ZNF267Q14586 743 aaPredicted RBP16.2■□□□□ 0.18
CLDN4-201ENST00000340958 SYPL1Q16563 259 aa16.2■□□□□ 0.18
CLDN4-201ENST00000340958 WDR53Q7Z5U6 358 aaPredicted RBP16.2■□□□□ 0.18
CLDN4-201ENST00000340958 LGI4Q8N135 537 aa16.2■□□□□ 0.18
CLDN4-201ENST00000340958 METTL25Q8N6Q8 603 aa16.2■□□□□ 0.18
CLDN4-201ENST00000340958 OR52R1Q8NGF1 315 aa16.2■□□□□ 0.18
CLDN4-201ENST00000340958 MIPOL1Q8TD10 442 aa16.2■□□□□ 0.18
CLDN4-201ENST00000340958 VPS50Q96JG6 964 aa16.2■□□□□ 0.18
CLDN4-201ENST00000340958 VCXQ9H320 206 aa16.2■□□□□ 0.18
CLDN4-201ENST00000340958 CXorf21Q9HAI6 301 aa16.2■□□□□ 0.18
CLDN4-201ENST00000340958 NTMQ9P121 344 aa16.2■□□□□ 0.18
CLDN4-201ENST00000340958 MKL2Q9ULH7 1088 aa16.2■□□□□ 0.18
CLDN4-201ENST00000340958 C15orf41Q9Y2V0 281 aa16.2■□□□□ 0.18
CLDN4-201ENST00000340958 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.19■□□□□ 0.18
CLDN4-201ENST00000340958 ASNA1O43681 348 aa16.19■□□□□ 0.18
CLDN4-201ENST00000340958 ALOX5P09917 674 aa16.19■□□□□ 0.18
CLDN4-201ENST00000340958 FGF5P12034 268 aa16.19■□□□□ 0.18
CLDN4-201ENST00000340958 MAP4K2Q12851 820 aa16.19■□□□□ 0.18
CLDN4-201ENST00000340958 ZNF155Q12901 538 aaPredicted RBP16.19■□□□□ 0.18
CLDN4-201ENST00000340958 NKAIN1Q4KMZ8 207 aa16.19■□□□□ 0.18
CLDN4-201ENST00000340958 CDC73Q6P1J9 531 aa16.19■□□□□ 0.18
CLDN4-201ENST00000340958 DGAT2L6Q6ZPD8 337 aa16.19■□□□□ 0.18
CLDN4-201ENST00000340958 VTCN1Q7Z7D3 282 aa16.19■□□□□ 0.18
CLDN4-201ENST00000340958 KRT73Q86Y46 540 aa16.19■□□□□ 0.18
CLDN4-201ENST00000340958 SIMC1Q8NDZ2 872 aa16.19■□□□□ 0.18
CLDN4-201ENST00000340958 CATSPER1Q8NEC5 780 aa16.19■□□□□ 0.18
CLDN4-201ENST00000340958 C7orf57Q8NEG2 295 aa16.19■□□□□ 0.18
CLDN4-201ENST00000340958 SPPL2AQ8TCT8 520 aa16.19■□□□□ 0.18
CLDN4-201ENST00000340958 GIMAP5Q96F15 307 aa16.19■□□□□ 0.18
CLDN4-201ENST00000340958 DOHHQ9BU89 302 aa16.19■□□□□ 0.18
CLDN4-201ENST00000340958 BDH2Q9BUT1 245 aa16.19■□□□□ 0.18
CLDN4-201ENST00000340958 AGPAT4Q9NRZ5 378 aa16.19■□□□□ 0.18
CLDN4-201ENST00000340958 LANCL2Q9NS86 450 aa16.19■□□□□ 0.18
CLDN4-201ENST00000340958 SLC39A1Q9NY26 324 aa16.19■□□□□ 0.18
CLDN4-201ENST00000340958 PCDHGB3Q9Y5G1 929 aa16.19■□□□□ 0.18
CLDN4-201ENST00000340958 MED19A0JLT2 244 aaPredicted RBP16.19■□□□□ 0.18
CLDN4-201ENST00000340958 TGFBR3LH3BV60 316 aa16.19■□□□□ 0.18
CLDN4-201ENST00000340958 CPNE3O75131 537 aaKnown RBP16.19■□□□□ 0.18
CLDN4-201ENST00000340958 DEAF1O75398 565 aaPredicted RBP16.19■□□□□ 0.18
CLDN4-201ENST00000340958 SERPINB7O75635 380 aa16.19■□□□□ 0.18
CLDN4-201ENST00000340958 PGM3O95394 542 aa16.19■□□□□ 0.18
CLDN4-201ENST00000340958 CCL4P13236 92 aa16.19■□□□□ 0.18
CLDN4-201ENST00000340958 AGXTP21549 392 aa16.19■□□□□ 0.18
CLDN4-201ENST00000340958 SELENOWP63302 87 aa16.19■□□□□ 0.18
CLDN4-201ENST00000340958 IGLV3-21P80748 117 aaPredicted RBP16.19■□□□□ 0.18
CLDN4-201ENST00000340958 ILKQ13418 452 aa16.19■□□□□ 0.18
CLDN4-201ENST00000340958 MYBPC3Q14896 1274 aa16.19■□□□□ 0.18
CLDN4-201ENST00000340958 ZNHIT3Q15649 155 aaPredicted RBP16.19■□□□□ 0.18
CLDN4-201ENST00000340958 NSDHLQ15738 373 aa16.19■□□□□ 0.18
CLDN4-201ENST00000340958 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.19■□□□□ 0.18
CLDN4-201ENST00000340958 CRB2Q5IJ48 1285 aa16.19■□□□□ 0.18
CLDN4-201ENST00000340958 QSOX2Q6ZRP7 698 aa16.19■□□□□ 0.18
CLDN4-201ENST00000340958 SHISA6Q6ZSJ9 500 aa16.19■□□□□ 0.18
CLDN4-201ENST00000340958 CCDC80Q76M96 950 aa16.19■□□□□ 0.18
CLDN4-201ENST00000340958 ANKFN1Q8N957 763 aa16.19■□□□□ 0.18
CLDN4-201ENST00000340958 TMEM102Q8N9M5 508 aaPredicted RBP16.19■□□□□ 0.18
CLDN4-201ENST00000340958 SMYD1Q8NB12 490 aa16.19■□□□□ 0.18
CLDN4-201ENST00000340958 SLC38A9Q8NBW4 561 aa16.19■□□□□ 0.18
CLDN4-201ENST00000340958 CENPNQ96H22 339 aaPredicted RBP16.19■□□□□ 0.18
CLDN4-201ENST00000340958 CACYBPQ9HB71 228 aaKnown RBP16.19■□□□□ 0.18
CLDN4-201ENST00000340958 IFT80Q9P2H3 777 aaPredicted RBP16.19■□□□□ 0.18
CLDN4-201ENST00000340958 CTSFQ9UBX1 484 aa16.19■□□□□ 0.18
CLDN4-201ENST00000340958 LIPT1Q9Y234 373 aa16.19■□□□□ 0.18
CLDN4-201ENST00000340958 ZNF451Q9Y4E5 1061 aa16.19■□□□□ 0.18
CLDN4-201ENST00000340958 ADAMTS20P59510 1910 aa16.19■□□□□ 0.18
CLDN4-201ENST00000340958 A8MUA0 341 aa16.18■□□□□ 0.18
CLDN4-201ENST00000340958 C17orf105B2RV13 164 aa16.18■□□□□ 0.18
CLDN4-201ENST00000340958 TMX2-CTNND1H3BSU7 103 aa16.18■□□□□ 0.18
CLDN4-201ENST00000340958 CASQ2O14958 399 aaPredicted RBP16.18■□□□□ 0.18
CLDN4-201ENST00000340958 CLOCKO15516 846 aa16.18■□□□□ 0.18
CLDN4-201ENST00000340958 CST1P01037 141 aa16.18■□□□□ 0.18
CLDN4-201ENST00000340958 FABP3P05413 133 aa16.18■□□□□ 0.18
CLDN4-201ENST00000340958 CCKBRP32239 447 aa16.18■□□□□ 0.18
CLDN4-201ENST00000340958 PDX1P52945 283 aa16.18■□□□□ 0.18
CLDN4-201ENST00000340958 ELOAQ14241 798 aaKnown RBP16.18■□□□□ 0.18
CLDN4-201ENST00000340958 ATP6AP1Q15904 470 aa16.18■□□□□ 0.18
CLDN4-201ENST00000340958 FHL5Q5TD97 284 aa16.18■□□□□ 0.18
CLDN4-201ENST00000340958 ARMC8Q8IUR7 673 aa16.18■□□□□ 0.18
CLDN4-201ENST00000340958 ZDHHC21Q8IVQ6 265 aa16.18■□□□□ 0.18
CLDN4-201ENST00000340958 CDRT4Q8N9R6 151 aa16.18■□□□□ 0.18
CLDN4-201ENST00000340958 SLC16A11Q8NCK7 471 aa16.18■□□□□ 0.18
CLDN4-201ENST00000340958 BBS10Q8TAM1 723 aa16.18■□□□□ 0.18
CLDN4-201ENST00000340958 GPR151Q8TDV0 419 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms