RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 BBS4Q96RK4 519 aa13.43□□□□□ -0.26
ERCC1-203ENST00000340192 CENPHQ9H3R5 247 aa13.43□□□□□ -0.26
ERCC1-203ENST00000340192 PRODH2Q9UF12 536 aa13.43□□□□□ -0.26
ERCC1-203ENST00000340192 EXO1Q9UQ84 846 aaKnown RBP13.43□□□□□ -0.26
ERCC1-203ENST00000340192 WBP11Q9Y2W2 641 aaKnown RBP13.43□□□□□ -0.26
ERCC1-203ENST00000340192 MEMO1Q9Y316 297 aa13.43□□□□□ -0.26
ERCC1-203ENST00000340192 TRAF6Q9Y4K3 522 aa13.43□□□□□ -0.26
ERCC1-203ENST00000340192 NCOA6Q14686 2063 aaPredicted RBP13.43□□□□□ -0.26
ERCC1-203ENST00000340192 ATP6AP2A0A1C7CYW4 349 aa13.42□□□□□ -0.26
ERCC1-203ENST00000340192 MYO1GB0I1T2 1018 aa13.42□□□□□ -0.26
ERCC1-203ENST00000340192 LSM1O15116 133 aaKnown RBP13.42□□□□□ -0.26
ERCC1-203ENST00000340192 CTIFO43310 598 aaKnown RBP13.42□□□□□ -0.26
ERCC1-203ENST00000340192 ATP6AP2O75787 350 aa13.42□□□□□ -0.26
ERCC1-203ENST00000340192 BCAS2O75934 225 aaPredicted RBP13.42□□□□□ -0.26
ERCC1-203ENST00000340192 JUNP05412 331 aaKnown RBP13.42□□□□□ -0.26
ERCC1-203ENST00000340192 TPOP07202 933 aa13.42□□□□□ -0.26
ERCC1-203ENST00000340192 CELA3AP09093 270 aa13.42□□□□□ -0.26
ERCC1-203ENST00000340192 SERPINB5P36952 375 aa13.42□□□□□ -0.26
ERCC1-203ENST00000340192 ADORA2A-AS1P86434 159 aa13.42□□□□□ -0.26
ERCC1-203ENST00000340192 CEP85LQ5SZL2 805 aa13.42□□□□□ -0.26
ERCC1-203ENST00000340192 BICRALQ6AI39 1079 aa13.42□□□□□ -0.26
ERCC1-203ENST00000340192 CD163Q86VB7 1156 aa13.42□□□□□ -0.26
ERCC1-203ENST00000340192 EXOC3L1Q86VI1 746 aa13.42□□□□□ -0.26
ERCC1-203ENST00000340192 DDIASQ8IXT1 998 aa13.42□□□□□ -0.26
ERCC1-203ENST00000340192 FAM9CQ8IZT9 166 aa13.42□□□□□ -0.26
ERCC1-203ENST00000340192 CLYBLQ8N0X4 340 aa13.42□□□□□ -0.26
ERCC1-203ENST00000340192 OR7G2Q8NG99 324 aa13.42□□□□□ -0.26
ERCC1-203ENST00000340192 SPPL2AQ8TCT8 520 aa13.42□□□□□ -0.26
ERCC1-203ENST00000340192 TWIST2Q8WVJ9 160 aa13.42□□□□□ -0.26
ERCC1-203ENST00000340192 HSPBAP1Q96EW2 488 aa13.42□□□□□ -0.26
ERCC1-203ENST00000340192 EGLN2Q96KS0 407 aa13.42□□□□□ -0.26
ERCC1-203ENST00000340192 JSRP1Q96MG2 331 aaPredicted RBP13.42□□□□□ -0.26
ERCC1-203ENST00000340192 DOHHQ9BU89 302 aa13.42□□□□□ -0.26
ERCC1-203ENST00000340192 ZFP64Q9NPA5 681 aa13.42□□□□□ -0.26
ERCC1-203ENST00000340192 TAS2R7Q9NYW3 318 aa13.42□□□□□ -0.26
ERCC1-203ENST00000340192 BOKQ9UMX3 212 aaPredicted RBP13.42□□□□□ -0.26
ERCC1-203ENST00000340192 LIPGQ9Y5X9 500 aa13.42□□□□□ -0.26
ERCC1-203ENST00000340192 ANKRD33BA6NCL7 494 aa13.41□□□□□ -0.26
ERCC1-203ENST00000340192 FRG2CA6NGY1 282 aa13.41□□□□□ -0.26
ERCC1-203ENST00000340192 LRRC3CA6NJW4 275 aa13.41□□□□□ -0.26
ERCC1-203ENST00000340192 PIP5K1BO14986 540 aa13.41□□□□□ -0.26
ERCC1-203ENST00000340192 ACOX3O15254 700 aa13.41□□□□□ -0.26
ERCC1-203ENST00000340192 PLOD3O60568 738 aa13.41□□□□□ -0.26
ERCC1-203ENST00000340192 TRIM3O75382 744 aaPredicted RBP13.41□□□□□ -0.26
ERCC1-203ENST00000340192 NME6O75414 186 aaPredicted RBP13.41□□□□□ -0.26
ERCC1-203ENST00000340192 PPM1BO75688 479 aa13.41□□□□□ -0.26
ERCC1-203ENST00000340192 IGHG3P01860 377 aa13.41□□□□□ -0.26
ERCC1-203ENST00000340192 ABCB1P08183 1280 aaPredicted RBP13.41□□□□□ -0.26
ERCC1-203ENST00000340192 RFPL3SP0C7P2 107 aa13.41□□□□□ -0.26
ERCC1-203ENST00000340192 SDC1P18827 310 aa13.41□□□□□ -0.26
ERCC1-203ENST00000340192 DRD5P21918 477 aa13.41□□□□□ -0.26
ERCC1-203ENST00000340192 PPICP45877 212 aa13.41□□□□□ -0.26
ERCC1-203ENST00000340192 SERPINB4P48594 390 aa13.41□□□□□ -0.26
ERCC1-203ENST00000340192 NCBP2P52298 156 aaKnown RBP eCLIP13.41□□□□□ -0.26
ERCC1-203ENST00000340192 DCAF7P61962 342 aa13.41□□□□□ -0.26
ERCC1-203ENST00000340192 RPL38P63173 70 aaKnown RBP13.41□□□□□ -0.26
ERCC1-203ENST00000340192 SLC10A1Q14973 349 aa13.41□□□□□ -0.26
ERCC1-203ENST00000340192 GALNTL6Q49A17 601 aa13.41□□□□□ -0.26
ERCC1-203ENST00000340192 RFTN2Q52LD8 501 aaPredicted RBP13.41□□□□□ -0.26
ERCC1-203ENST00000340192 TBCELQ5QJ74 424 aa13.41□□□□□ -0.26
ERCC1-203ENST00000340192 RPTNQ6XPR3 784 aa13.41□□□□□ -0.26
ERCC1-203ENST00000340192 NCCRP1Q6ZVX7 275 aaPredicted RBP13.41□□□□□ -0.26
ERCC1-203ENST00000340192 MRGPRGQ86SM5 289 aa13.41□□□□□ -0.26
ERCC1-203ENST00000340192 HOMEZQ8IX15 550 aa13.41□□□□□ -0.26
ERCC1-203ENST00000340192 OR6Y1Q8NGX8 325 aa13.41□□□□□ -0.26
ERCC1-203ENST00000340192 GFM2Q969S9 779 aaKnown RBP13.41□□□□□ -0.26
ERCC1-203ENST00000340192 OMA1Q96E52 524 aa13.41□□□□□ -0.26
ERCC1-203ENST00000340192 PKNOX2Q96KN3 472 aa13.41□□□□□ -0.26
ERCC1-203ENST00000340192 FCRL1Q96LA6 429 aa13.41□□□□□ -0.26
ERCC1-203ENST00000340192 RILPQ96NA2 401 aa13.41□□□□□ -0.26
ERCC1-203ENST00000340192 SECISBP2Q96T21 854 aaKnown RBP13.41□□□□□ -0.26
ERCC1-203ENST00000340192 CCT7Q99832 543 aa13.41□□□□□ -0.26
ERCC1-203ENST00000340192 ZNF703Q9H7S9 590 aaPredicted RBP13.41□□□□□ -0.26
ERCC1-203ENST00000340192 SSU72Q9NP77 194 aaKnown RBP13.41□□□□□ -0.26
ERCC1-203ENST00000340192 GPR55Q9Y2T6 319 aaPredicted RBP13.41□□□□□ -0.26
ERCC1-203ENST00000340192 DNAJC13O75165 2243 aa13.41□□□□□ -0.26
ERCC1-203ENST00000340192 CENPEQ02224 2701 aa13.41□□□□□ -0.26
ERCC1-203ENST00000340192 NPIPA2E9PIF3 369 aa13.4□□□□□ -0.26
ERCC1-203ENST00000340192 E9PLN8 166 aa13.4□□□□□ -0.26
ERCC1-203ENST00000340192 NPIPA3F8WFD2 350 aa13.4□□□□□ -0.26
ERCC1-203ENST00000340192 ADAM10O14672 748 aa13.4□□□□□ -0.26
ERCC1-203ENST00000340192 NAGAP17050 411 aa13.4□□□□□ -0.26
ERCC1-203ENST00000340192 NTSP30990 170 aa13.4□□□□□ -0.26
ERCC1-203ENST00000340192 CASP3P42574 277 aa13.4□□□□□ -0.26
ERCC1-203ENST00000340192 CORO7P57737 925 aa13.4□□□□□ -0.26
ERCC1-203ENST00000340192 RPP38P78345 283 aaKnown RBP13.4□□□□□ -0.26
ERCC1-203ENST00000340192 PLCXD2Q0VAA5 305 aa13.4□□□□□ -0.26
ERCC1-203ENST00000340192 TNFAIP8L3Q5GJ75 292 aa13.4□□□□□ -0.26
ERCC1-203ENST00000340192 EMC4Q5J8M3 183 aa13.4□□□□□ -0.26
ERCC1-203ENST00000340192 CES4AQ5XG92 561 aa13.4□□□□□ -0.26
ERCC1-203ENST00000340192 DESI1Q6ICB0 168 aa13.4□□□□□ -0.26
ERCC1-203ENST00000340192 ANKRD26P1Q6NSI1 321 aa13.4□□□□□ -0.26
ERCC1-203ENST00000340192 TRILQ7L0X0 811 aa13.4□□□□□ -0.26
ERCC1-203ENST00000340192 NUDCD3Q8IVD9 361 aa13.4□□□□□ -0.26
ERCC1-203ENST00000340192 ZNF808Q8N4W9 903 aaPredicted RBP13.4□□□□□ -0.26
ERCC1-203ENST00000340192 ZNF597Q96LX8 424 aa13.4□□□□□ -0.26
ERCC1-203ENST00000340192 VSTM2LQ96N03 204 aa13.4□□□□□ -0.26
ERCC1-203ENST00000340192 AMDHD1Q96NU7 426 aa13.4□□□□□ -0.26
ERCC1-203ENST00000340192 TSSK3Q96PN8 268 aa13.4□□□□□ -0.26
ERCC1-203ENST00000340192 BTBD9Q96Q07 612 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms