RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 ANKRD13BQ86YJ7 626 aa12.48□□□□□ -0.41
HLCS-201ENST00000336648 SH3YL1Q96HL8 342 aaPredicted RBP12.48□□□□□ -0.41
HLCS-201ENST00000336648 QPCTLQ9NXS2 382 aa12.48□□□□□ -0.41
HLCS-201ENST00000336648 VSTM2BA6NLU5 285 aa12.48□□□□□ -0.41
HLCS-201ENST00000336648 TXNL1O43396 289 aa12.48□□□□□ -0.41
HLCS-201ENST00000336648 KIAA0513O60268 411 aa12.48□□□□□ -0.41
HLCS-201ENST00000336648 SNAP29O95721 258 aa12.48□□□□□ -0.41
HLCS-201ENST00000336648 DIO3P55073 304 aa12.48□□□□□ -0.41
HLCS-201ENST00000336648 HYAL2Q12891 473 aa12.48□□□□□ -0.41
HLCS-201ENST00000336648 STEAP4Q687X5 459 aa12.48□□□□□ -0.41
HLCS-201ENST00000336648 PNCKQ6P2M8 343 aa12.48□□□□□ -0.41
HLCS-201ENST00000336648 Q6ZVL8 140 aa12.48□□□□□ -0.41
HLCS-201ENST00000336648 SERINC5Q86VE9 423 aa12.48□□□□□ -0.41
HLCS-201ENST00000336648 TEX26Q8N6G2 289 aa12.48□□□□□ -0.41
HLCS-201ENST00000336648 NANOS1Q8WY41 292 aaKnown RBP12.48□□□□□ -0.41
HLCS-201ENST00000336648 MR1Q95460 341 aa12.48□□□□□ -0.41
HLCS-201ENST00000336648 SPIN2AQ99865 258 aa12.48□□□□□ -0.41
HLCS-201ENST00000336648 SPIN2BQ9BPZ2 258 aa12.48□□□□□ -0.41
HLCS-201ENST00000336648 UBE2J1Q9Y385 318 aaPredicted RBP12.48□□□□□ -0.41
HLCS-201ENST00000336648 NFS1Q9Y697 457 aa12.48□□□□□ -0.41
HLCS-201ENST00000336648 GRXCR2A6NFK2 248 aa12.48□□□□□ -0.41
HLCS-201ENST00000336648 SCAMP2O15127 329 aaKnown RBP12.48□□□□□ -0.41
HLCS-201ENST00000336648 ADRB3P13945 408 aa12.48□□□□□ -0.41
HLCS-201ENST00000336648 HNF1BP35680 557 aa12.48□□□□□ -0.41
HLCS-201ENST00000336648 RNF4P78317 190 aa12.48□□□□□ -0.41
HLCS-201ENST00000336648 SLAMF1Q13291 335 aa12.48□□□□□ -0.41
HLCS-201ENST00000336648 UNC50Q53HI1 259 aa12.48□□□□□ -0.41
HLCS-201ENST00000336648 PRSS48Q7RTY5 328 aa12.48□□□□□ -0.41
HLCS-201ENST00000336648 C6orf120Q7Z4R8 191 aa12.48□□□□□ -0.41
HLCS-201ENST00000336648 GPR149Q86SP6 731 aa12.48□□□□□ -0.41
HLCS-201ENST00000336648 C17orf113A0A1B0GUU1 675 aa12.48□□□□□ -0.41
HLCS-201ENST00000336648 TRAPPC13A5PLN9 417 aa12.48□□□□□ -0.41
HLCS-201ENST00000336648 ZNF850A8MQ14 1090 aa12.48□□□□□ -0.41
HLCS-201ENST00000336648 A8MU76 341 aa12.48□□□□□ -0.41
HLCS-201ENST00000336648 PAHP00439 452 aa12.48□□□□□ -0.41
HLCS-201ENST00000336648 MRPL3P09001 348 aaKnown RBP12.48□□□□□ -0.41
HLCS-201ENST00000336648 PYCR1P32322 319 aa12.48□□□□□ -0.41
HLCS-201ENST00000336648 GGT2P36268 569 aa12.48□□□□□ -0.41
HLCS-201ENST00000336648 ADH7P40394 386 aa12.48□□□□□ -0.41
HLCS-201ENST00000336648 OR1E2P47887 323 aa12.48□□□□□ -0.41
HLCS-201ENST00000336648 VSX2P58304 361 aaPredicted RBP12.48□□□□□ -0.41
HLCS-201ENST00000336648 TAS2R31P59538 309 aa12.48□□□□□ -0.41
HLCS-201ENST00000336648 DLX2Q07687 328 aaPredicted RBP12.48□□□□□ -0.41
HLCS-201ENST00000336648 SCAPQ12770 1279 aa12.48□□□□□ -0.41
HLCS-201ENST00000336648 PPA1Q15181 289 aa12.48□□□□□ -0.41
HLCS-201ENST00000336648 ZC3H14Q6PJT7 736 aaKnown RBP12.48□□□□□ -0.41
HLCS-201ENST00000336648 OR5M3Q8NGP4 307 aa12.48□□□□□ -0.41
HLCS-201ENST00000336648 FNDC8Q8TC99 324 aa12.48□□□□□ -0.41
HLCS-201ENST00000336648 FAM118AQ9NWS6 357 aa12.48□□□□□ -0.41
HLCS-201ENST00000336648 GHRLQ9UBU3 117 aa12.48□□□□□ -0.41
HLCS-201ENST00000336648 SLC35F4A4IF30 521 aa12.47□□□□□ -0.41
HLCS-201ENST00000336648 FGF18O76093 207 aa12.47□□□□□ -0.41
HLCS-201ENST00000336648 ADORA3P0DMS8 318 aa12.47□□□□□ -0.41
HLCS-201ENST00000336648 MAOAP21397 527 aa12.47□□□□□ -0.41
HLCS-201ENST00000336648 FDXRP22570 491 aa12.47□□□□□ -0.41
HLCS-201ENST00000336648 GGT5P36269 586 aa12.47□□□□□ -0.41
HLCS-201ENST00000336648 C14orf28Q4W4Y0 310 aa12.47□□□□□ -0.41
HLCS-201ENST00000336648 C12orf45Q8N5I9 185 aaPredicted RBP12.47□□□□□ -0.41
HLCS-201ENST00000336648 OR10T2Q8NGX3 314 aa12.47□□□□□ -0.41
HLCS-201ENST00000336648 P2RY13Q9BPV8 354 aa12.47□□□□□ -0.41
HLCS-201ENST00000336648 PELI2Q9HAT8 420 aa12.47□□□□□ -0.41
HLCS-201ENST00000336648 SPHK2Q9NRA0 654 aa12.47□□□□□ -0.41
HLCS-201ENST00000336648 KLHL9Q9P2J3 617 aa12.47□□□□□ -0.41
HLCS-201ENST00000336648 PLAGL1Q9UM63 463 aa12.47□□□□□ -0.41
HLCS-201ENST00000336648 BOLA2-SMG1P6H3BVE0 249 aa12.47□□□□□ -0.41
HLCS-201ENST00000336648 PEX14O75381 377 aa12.47□□□□□ -0.41
HLCS-201ENST00000336648 IRF2P14316 349 aa12.47□□□□□ -0.41
HLCS-201ENST00000336648 LSSP48449 732 aa12.47□□□□□ -0.41
HLCS-201ENST00000336648 MRPS10P82664 201 aaKnown RBP12.47□□□□□ -0.41
HLCS-201ENST00000336648 ZNF169Q14929 603 aaPredicted RBP12.47□□□□□ -0.41
HLCS-201ENST00000336648 ANKRD54Q6NXT1 300 aa12.47□□□□□ -0.41
HLCS-201ENST00000336648 NAXEQ8NCW5 288 aa12.47□□□□□ -0.41
HLCS-201ENST00000336648 OR52N2Q8NGI0 321 aa12.47□□□□□ -0.41
HLCS-201ENST00000336648 CNIH3Q8TBE1 160 aa12.47□□□□□ -0.41
HLCS-201ENST00000336648 DDX1Q92499 740 aaKnown RBP12.47□□□□□ -0.41
HLCS-201ENST00000336648 TRIB2Q92519 343 aa12.47□□□□□ -0.41
HLCS-201ENST00000336648 SLC25A44Q96H78 314 aaPredicted RBP12.47□□□□□ -0.41
HLCS-201ENST00000336648 ZNF395Q9H8N7 513 aaPredicted RBP12.47□□□□□ -0.41
HLCS-201ENST00000336648 LIN28AQ9H9Z2 209 aaKnown RBP12.47□□□□□ -0.41
HLCS-201ENST00000336648 FBRSL1Q9HCM7 1045 aaKnown RBP12.47□□□□□ -0.41
HLCS-201ENST00000336648 MAN2C1Q9NTJ4 1040 aa12.47□□□□□ -0.41
HLCS-201ENST00000336648 ADAM18Q9Y3Q7 739 aa12.47□□□□□ -0.41
HLCS-201ENST00000336648 A0A1B0GV50 99 aa12.47□□□□□ -0.41
HLCS-201ENST00000336648 LATO43561 262 aa12.47□□□□□ -0.41
HLCS-201ENST00000336648 RFPL2O75678 378 aa12.47□□□□□ -0.41
HLCS-201ENST00000336648 S1PR4O95977 384 aa12.47□□□□□ -0.41
HLCS-201ENST00000336648 GGT1P19440 569 aa12.47□□□□□ -0.41
HLCS-201ENST00000336648 PRKAR1BP31321 381 aa12.47□□□□□ -0.41
HLCS-201ENST00000336648 ELP2Q6IA86 826 aa12.47□□□□□ -0.41
HLCS-201ENST00000336648 DNTTIP1Q9H147 329 aa12.47□□□□□ -0.41
HLCS-201ENST00000336648 PPA2Q9H2U2 334 aa12.47□□□□□ -0.41
HLCS-201ENST00000336648 HMX3A6NHT5 357 aa12.47□□□□□ -0.41
HLCS-201ENST00000336648 GPR37L1O60883 481 aa12.47□□□□□ -0.41
HLCS-201ENST00000336648 LEFTY1O75610 366 aa12.47□□□□□ -0.41
HLCS-201ENST00000336648 GBAP04062 536 aa12.47□□□□□ -0.41
HLCS-201ENST00000336648 VEGFCP49767 419 aa12.47□□□□□ -0.41
HLCS-201ENST00000336648 GSCP56915 257 aaPredicted RBP12.47□□□□□ -0.41
HLCS-201ENST00000336648 OR4D2P58180 307 aa12.47□□□□□ -0.41
HLCS-201ENST00000336648 SF3B4Q15427 424 aaKnown RBP eCLIP12.47□□□□□ -0.41
HLCS-201ENST00000336648 OR4C11Q6IEV9 310 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms