RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 AIMP2Q13155 320 aaKnown RBP16.23■□□□□ 0.19
CHGA-202ENST00000334654 MYBPC3Q14896 1274 aa16.23■□□□□ 0.19
CHGA-202ENST00000334654 EBPQ15125 230 aaKnown RBP16.23■□□□□ 0.19
CHGA-202ENST00000334654 ZNF771Q7L3S4 317 aaPredicted RBP16.23■□□□□ 0.19
CHGA-202ENST00000334654 GPR155Q7Z3F1 870 aa16.23■□□□□ 0.19
CHGA-202ENST00000334654 C6orf120Q7Z4R8 191 aa16.23■□□□□ 0.19
CHGA-202ENST00000334654 DHDDSQ86SQ9 333 aa16.23■□□□□ 0.19
CHGA-202ENST00000334654 ZNF441Q8N8Z8 693 aa16.23■□□□□ 0.19
CHGA-202ENST00000334654 OR8K3Q8NH51 312 aa16.23■□□□□ 0.19
CHGA-202ENST00000334654 DNAJB8Q8NHS0 232 aa16.23■□□□□ 0.19
CHGA-202ENST00000334654 ADIPOR1Q96A54 375 aa16.23■□□□□ 0.19
CHGA-202ENST00000334654 MOAP1Q96BY2 351 aa16.23■□□□□ 0.19
CHGA-202ENST00000334654 NEURL3Q96EH8 262 aa16.23■□□□□ 0.19
CHGA-202ENST00000334654 C16orf58Q96GQ5 468 aa16.23■□□□□ 0.19
CHGA-202ENST00000334654 SLC35A5Q9BS91 424 aa16.23■□□□□ 0.19
CHGA-202ENST00000334654 ING2Q9H160 280 aa16.23■□□□□ 0.19
CHGA-202ENST00000334654 SERHL2Q9H4I8 314 aa16.23■□□□□ 0.19
CHGA-202ENST00000334654 COPS7AQ9UBW8 275 aa16.23■□□□□ 0.19
CHGA-202ENST00000334654 RNF103-CHMP3A0A140T963 221 aa16.22■□□□□ 0.19
CHGA-202ENST00000334654 OR6C76A6NM76 312 aa16.22■□□□□ 0.19
CHGA-202ENST00000334654 UBOX5O94941 541 aa16.22■□□□□ 0.19
CHGA-202ENST00000334654 UNC5CO95185 931 aa16.22■□□□□ 0.19
CHGA-202ENST00000334654 CPA2P48052 419 aa16.22■□□□□ 0.19
CHGA-202ENST00000334654 MAN2A2P49641 1150 aa16.22■□□□□ 0.19
CHGA-202ENST00000334654 RRADP55042 308 aa16.22■□□□□ 0.19
CHGA-202ENST00000334654 TMPRSS3P57727 454 aa16.22■□□□□ 0.19
CHGA-202ENST00000334654 PRR5P85299 388 aa16.22■□□□□ 0.19
CHGA-202ENST00000334654 NFYCQ13952 458 aa16.22■□□□□ 0.19
CHGA-202ENST00000334654 TRMT5Q32P41 509 aaKnown RBP16.22■□□□□ 0.19
CHGA-202ENST00000334654 MMEL1Q495T6 779 aa16.22■□□□□ 0.19
CHGA-202ENST00000334654 RUNDC3AQ59EK9 446 aa16.22■□□□□ 0.19
CHGA-202ENST00000334654 MFSD12Q6NUT3 480 aa16.22■□□□□ 0.19
CHGA-202ENST00000334654 C8orf82Q6P1X6 216 aaPredicted RBP16.22■□□□□ 0.19
CHGA-202ENST00000334654 HSDL2Q6YN16 418 aa16.22■□□□□ 0.19
CHGA-202ENST00000334654 APLFQ8IW19 511 aaPredicted RBP16.22■□□□□ 0.19
CHGA-202ENST00000334654 KBTBD2Q8IY47 623 aa16.22■□□□□ 0.19
CHGA-202ENST00000334654 ARMC10Q8N2F6 343 aa16.22■□□□□ 0.19
CHGA-202ENST00000334654 OR56A1Q8NGH5 318 aa16.22■□□□□ 0.19
CHGA-202ENST00000334654 FBXO27Q8NI29 283 aa16.22■□□□□ 0.19
CHGA-202ENST00000334654 NSL1Q96IY1 281 aa16.22■□□□□ 0.19
CHGA-202ENST00000334654 CGREF1Q99674 301 aa16.22■□□□□ 0.19
CHGA-202ENST00000334654 IKZF5Q9H5V7 419 aa16.22■□□□□ 0.19
CHGA-202ENST00000334654 LIN28AQ9H9Z2 209 aaKnown RBP16.22■□□□□ 0.19
CHGA-202ENST00000334654 IL1RL2Q9HB29 575 aa16.22■□□□□ 0.19
CHGA-202ENST00000334654 FOLH1BQ9HBA9 442 aa16.22■□□□□ 0.19
CHGA-202ENST00000334654 ZMIZ1Q9ULJ6 1067 aa16.22■□□□□ 0.19
CHGA-202ENST00000334654 CNTRLQ7Z7A1 2325 aa16.22■□□□□ 0.19
CHGA-202ENST00000334654 AIM2O14862 343 aa16.22■□□□□ 0.19
CHGA-202ENST00000334654 COQ9O75208 318 aa16.22■□□□□ 0.19
CHGA-202ENST00000334654 DNAJB5O75953 348 aa16.22■□□□□ 0.19
CHGA-202ENST00000334654 ANP32DO95626 131 aa16.22■□□□□ 0.19
CHGA-202ENST00000334654 NPPAP01160 153 aa16.22■□□□□ 0.19
CHGA-202ENST00000334654 PSG6Q00889 435 aa16.22■□□□□ 0.19
CHGA-202ENST00000334654 TP53BP2Q13625 1128 aa16.22■□□□□ 0.19
CHGA-202ENST00000334654 SPDYE7PQ495Y7 208 aa16.22■□□□□ 0.19
CHGA-202ENST00000334654 WDR53Q7Z5U6 358 aaPredicted RBP16.22■□□□□ 0.19
CHGA-202ENST00000334654 YTHDF3Q7Z739 585 aaKnown RBP16.22■□□□□ 0.19
CHGA-202ENST00000334654 TRIML2Q8N7C3 387 aa16.22■□□□□ 0.19
CHGA-202ENST00000334654 PCYOX1LQ8NBM8 494 aa16.22■□□□□ 0.19
CHGA-202ENST00000334654 CLEC1AQ8NC01 280 aa16.22■□□□□ 0.19
CHGA-202ENST00000334654 NUBPLQ8TB37 319 aa16.22■□□□□ 0.19
CHGA-202ENST00000334654 LRRC58Q96CX6 371 aa16.22■□□□□ 0.19
CHGA-202ENST00000334654 THOC3Q96J01 351 aaKnown RBP16.22■□□□□ 0.19
CHGA-202ENST00000334654 ANKRD27Q96NW4 1050 aa16.22■□□□□ 0.19
CHGA-202ENST00000334654 MS4A4EQ96PG1 132 aa16.22■□□□□ 0.19
CHGA-202ENST00000334654 GPATCH1Q9BRR8 931 aaKnown RBP16.22■□□□□ 0.19
CHGA-202ENST00000334654 SLC39A3Q9BRY0 314 aa16.22■□□□□ 0.19
CHGA-202ENST00000334654 ITPAQ9BY32 194 aa16.22■□□□□ 0.19
CHGA-202ENST00000334654 WWTR1Q9GZV5 400 aa16.22■□□□□ 0.19
CHGA-202ENST00000334654 EFCAB1Q9HAE3 211 aa16.22■□□□□ 0.19
CHGA-202ENST00000334654 TPT1P8Q9HAU6 139 aa16.22■□□□□ 0.19
CHGA-202ENST00000334654 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.22■□□□□ 0.19
CHGA-202ENST00000334654 PKD1L2Q7Z442 2459 aa16.21■□□□□ 0.19
CHGA-202ENST00000334654 CPAMD8Q8IZJ3 1885 aa16.21■□□□□ 0.19
CHGA-202ENST00000334654 CLIC1O00299 241 aa16.21■□□□□ 0.19
CHGA-202ENST00000334654 MAN1A2O60476 641 aa16.21■□□□□ 0.19
CHGA-202ENST00000334654 ZNF354AO60765 605 aaPredicted RBP16.21■□□□□ 0.19
CHGA-202ENST00000334654 ZFAND5O76080 213 aa16.21■□□□□ 0.19
CHGA-202ENST00000334654 CT45A8P0DMV1 189 aa16.21■□□□□ 0.19
CHGA-202ENST00000334654 CT45A9P0DMV2 189 aa16.21■□□□□ 0.19
CHGA-202ENST00000334654 ACP2P11117 423 aa16.21■□□□□ 0.19
CHGA-202ENST00000334654 CASP9P55211 416 aa16.21■□□□□ 0.19
CHGA-202ENST00000334654 RPS26P62854 115 aaKnown RBP16.21■□□□□ 0.19
CHGA-202ENST00000334654 CAPRIN1Q14444 709 aaKnown RBP16.21■□□□□ 0.19
CHGA-202ENST00000334654 LASP1Q14847 261 aaKnown RBP16.21■□□□□ 0.19
CHGA-202ENST00000334654 CT45A2Q5DJT8 189 aa16.21■□□□□ 0.19
CHGA-202ENST00000334654 COX20Q5RI15 118 aa16.21■□□□□ 0.19
CHGA-202ENST00000334654 TCTN3Q6NUS6 607 aa16.21■□□□□ 0.19
CHGA-202ENST00000334654 JMJD6Q6NYC1 403 aaPredicted RBP16.21■□□□□ 0.19
CHGA-202ENST00000334654 NPSR1Q6W5P4 371 aa16.21■□□□□ 0.19
CHGA-202ENST00000334654 HACD2Q6Y1H2 254 aa16.21■□□□□ 0.19
CHGA-202ENST00000334654 C16orf47Q6ZP98 133 aaPredicted RBP16.21■□□□□ 0.19
CHGA-202ENST00000334654 SZRD1Q7Z422 152 aa16.21■□□□□ 0.19
CHGA-202ENST00000334654 C10orf111Q8N326 155 aa16.21■□□□□ 0.19
CHGA-202ENST00000334654 GALNT16Q8N428 558 aa16.21■□□□□ 0.19
CHGA-202ENST00000334654 SLC16A11Q8NCK7 471 aa16.21■□□□□ 0.19
CHGA-202ENST00000334654 MIPOL1Q8TD10 442 aa16.21■□□□□ 0.19
CHGA-202ENST00000334654 BRIX1Q8TDN6 353 aaKnown RBP16.21■□□□□ 0.19
CHGA-202ENST00000334654 THAP3Q8WTV1 239 aaPredicted RBP16.21■□□□□ 0.19
CHGA-202ENST00000334654 CPPED1Q9BRF8 314 aaPredicted RBP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms