RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 NKAIN2Q5VXU1 208 aa13.99□□□□□ -0.17
TPM3-205ENST00000328159 LAIR2Q6ISS4 152 aa13.99□□□□□ -0.17
TPM3-205ENST00000328159 NIPAL1Q6NVV3 410 aa13.99□□□□□ -0.17
TPM3-205ENST00000328159 BORAQ6PGQ7 559 aa13.99□□□□□ -0.17
TPM3-205ENST00000328159 HMGN2P46Q86SG4 172 aa13.99□□□□□ -0.17
TPM3-205ENST00000328159 COMTD1Q86VU5 262 aa13.99□□□□□ -0.17
TPM3-205ENST00000328159 LACC1Q8IV20 430 aa13.99□□□□□ -0.17
TPM3-205ENST00000328159 TAGAPQ8N103 731 aa13.99□□□□□ -0.17
TPM3-205ENST00000328159 SLC16A11Q8NCK7 471 aa13.99□□□□□ -0.17
TPM3-205ENST00000328159 SIMC1Q8NDZ2 872 aa13.99□□□□□ -0.17
TPM3-205ENST00000328159 OR9Q2Q8NGE9 314 aa13.99□□□□□ -0.17
TPM3-205ENST00000328159 MAFAQ8NHW3 353 aaPredicted RBP13.99□□□□□ -0.17
TPM3-205ENST00000328159 ANKRD9Q96BM1 317 aaPredicted RBP13.99□□□□□ -0.17
TPM3-205ENST00000328159 DGCR14Q96DF8 476 aaKnown RBP13.99□□□□□ -0.17
TPM3-205ENST00000328159 CD180Q99467 661 aa13.99□□□□□ -0.17
TPM3-205ENST00000328159 PITX2Q99697 317 aa13.99□□□□□ -0.17
TPM3-205ENST00000328159 WFDC6Q9BQY6 131 aa13.99□□□□□ -0.17
TPM3-205ENST00000328159 RBM38Q9H0Z9 239 aaKnown RBP13.99□□□□□ -0.17
TPM3-205ENST00000328159 POFUT2Q9Y2G5 429 aa13.99□□□□□ -0.17
TPM3-205ENST00000328159 HCN4Q9Y3Q4 1203 aa13.99□□□□□ -0.17
TPM3-205ENST00000328159 DSPPQ9NZW4 1301 aa13.98□□□□□ -0.17
TPM3-205ENST00000328159 SDK1Q7Z5N4 2213 aa13.98□□□□□ -0.17
TPM3-205ENST00000328159 A0A087WV62 115 aa13.98□□□□□ -0.17
TPM3-205ENST00000328159 CCDC163A0A0D9SF12 145 aa13.98□□□□□ -0.17
TPM3-205ENST00000328159 ARRDC5A6NEK1 342 aa13.98□□□□□ -0.17
TPM3-205ENST00000328159 CASC3O15234 703 aaKnown RBP13.98□□□□□ -0.17
TPM3-205ENST00000328159 FOXS1O43638 330 aa13.98□□□□□ -0.17
TPM3-205ENST00000328159 SEMA7AO75326 666 aa13.98□□□□□ -0.17
TPM3-205ENST00000328159 EPPINO95925 133 aa13.98□□□□□ -0.17
TPM3-205ENST00000328159 LGI1O95970 557 aa13.98□□□□□ -0.17
TPM3-205ENST00000328159 ALPPP05187 535 aa13.98□□□□□ -0.17
TPM3-205ENST00000328159 IFI6P09912 130 aa13.98□□□□□ -0.17
TPM3-205ENST00000328159 CTSKP43235 329 aa13.98□□□□□ -0.17
TPM3-205ENST00000328159 CHRNEQ04844 493 aa13.98□□□□□ -0.17
TPM3-205ENST00000328159 CDK5R2Q13319 367 aa13.98□□□□□ -0.17
TPM3-205ENST00000328159 ZNF773Q6PK81 442 aa13.98□□□□□ -0.17
TPM3-205ENST00000328159 SLC25A45Q8N413 288 aa13.98□□□□□ -0.17
TPM3-205ENST00000328159 ZNF675Q8TD23 568 aa13.98□□□□□ -0.17
TPM3-205ENST00000328159 DOK4Q8TEW6 326 aa13.98□□□□□ -0.17
TPM3-205ENST00000328159 SLC9A6Q92581 669 aa13.98□□□□□ -0.17
TPM3-205ENST00000328159 CDS1Q92903 461 aa13.98□□□□□ -0.17
TPM3-205ENST00000328159 DHRS1Q96LJ7 313 aa13.98□□□□□ -0.17
TPM3-205ENST00000328159 PINK1Q9BXM7 581 aa13.98□□□□□ -0.17
TPM3-205ENST00000328159 CHRNA10Q9GZZ6 450 aa13.98□□□□□ -0.17
TPM3-205ENST00000328159 NMNAT1Q9HAN9 279 aaPredicted RBP13.98□□□□□ -0.17
TPM3-205ENST00000328159 PDE7BQ9NP56 450 aa13.98□□□□□ -0.17
TPM3-205ENST00000328159 HCN3Q9P1Z3 774 aa13.98□□□□□ -0.17
TPM3-205ENST00000328159 SLC9A8Q9Y2E8 581 aa13.98□□□□□ -0.17
TPM3-205ENST00000328159 SPTBP11277 2137 aa13.98□□□□□ -0.17
TPM3-205ENST00000328159 TRBV4-1A0A0J9YWV2 114 aa13.97□□□□□ -0.17
TPM3-205ENST00000328159 HYKKA2RU49 373 aa13.97□□□□□ -0.17
TPM3-205ENST00000328159 M0R3H8 397 aa13.97□□□□□ -0.17
TPM3-205ENST00000328159 PLOD3O60568 738 aa13.97□□□□□ -0.17
TPM3-205ENST00000328159 ZBTB11O95625 1053 aaPredicted RBP13.97□□□□□ -0.17
TPM3-205ENST00000328159 H1F0P07305 194 aaKnown RBP13.97□□□□□ -0.17
TPM3-205ENST00000328159 ACP2P11117 423 aa13.97□□□□□ -0.17
TPM3-205ENST00000328159 RNH1P13489 461 aaKnown RBP13.97□□□□□ -0.17
TPM3-205ENST00000328159 AGXTP21549 392 aa13.97□□□□□ -0.17
TPM3-205ENST00000328159 CBLP22681 906 aa13.97□□□□□ -0.17
TPM3-205ENST00000328159 EEF1B2P24534 225 aaKnown RBP13.97□□□□□ -0.17
TPM3-205ENST00000328159 PDX1P52945 283 aa13.97□□□□□ -0.17
TPM3-205ENST00000328159 OR1D5P58170 312 aa13.97□□□□□ -0.17
TPM3-205ENST00000328159 GABARAPL2P60520 117 aa13.97□□□□□ -0.17
TPM3-205ENST00000328159 RPP38P78345 283 aaKnown RBP13.97□□□□□ -0.17
TPM3-205ENST00000328159 HPCAP84074 193 aa13.97□□□□□ -0.17
TPM3-205ENST00000328159 MGAT2Q10469 447 aa13.97□□□□□ -0.17
TPM3-205ENST00000328159 FAM53BQ14153 422 aa13.97□□□□□ -0.17
TPM3-205ENST00000328159 DUSP5Q16690 384 aa13.97□□□□□ -0.17
TPM3-205ENST00000328159 PRICKLE4Q2TBC4 344 aa13.97□□□□□ -0.17
TPM3-205ENST00000328159 ZNF311Q5JNZ3 666 aa13.97□□□□□ -0.17
TPM3-205ENST00000328159 LYSMD4Q5XG99 296 aa13.97□□□□□ -0.17
TPM3-205ENST00000328159 TSPYL5Q86VY4 417 aaPredicted RBP13.97□□□□□ -0.17
TPM3-205ENST00000328159 CNIH3Q8TBE1 160 aa13.97□□□□□ -0.17
TPM3-205ENST00000328159 TMIGD2Q96BF3 282 aa13.97□□□□□ -0.17
TPM3-205ENST00000328159 AHCYL2Q96HN2 611 aaKnown RBP13.97□□□□□ -0.17
TPM3-205ENST00000328159 NIPSNAP1Q9BPW8 284 aa13.97□□□□□ -0.17
TPM3-205ENST00000328159 QRSL1Q9H0R6 528 aaKnown RBP13.97□□□□□ -0.17
TPM3-205ENST00000328159 ZNF556Q9HAH1 456 aa13.97□□□□□ -0.17
TPM3-205ENST00000328159 IRAK4Q9NWZ3 460 aa13.97□□□□□ -0.17
TPM3-205ENST00000328159 MAT2BQ9NZL9 334 aa13.97□□□□□ -0.17
TPM3-205ENST00000328159 KLHL3Q9UH77 587 aa13.97□□□□□ -0.17
TPM3-205ENST00000328159 ACAD8Q9UKU7 415 aa13.97□□□□□ -0.17
TPM3-205ENST00000328159 BLOC1S6Q9UL45 172 aa13.97□□□□□ -0.17
TPM3-205ENST00000328159 TMCC3Q9ULS5 477 aa13.97□□□□□ -0.17
TPM3-205ENST00000328159 SLC1A7O00341 560 aa13.96□□□□□ -0.17
TPM3-205ENST00000328159 SYT5O00445 386 aa13.96□□□□□ -0.17
TPM3-205ENST00000328159 NUDT21O43809 227 aaKnown RBP13.96□□□□□ -0.17
TPM3-205ENST00000328159 NSA2O95478 260 aaKnown RBP13.96□□□□□ -0.17
TPM3-205ENST00000328159 SLC35E2P0CK97 266 aa13.96□□□□□ -0.17
TPM3-205ENST00000328159 DHPSP49366 369 aaPredicted RBP13.96□□□□□ -0.17
TPM3-205ENST00000328159 MAPK10P53779 464 aa13.96□□□□□ -0.17
TPM3-205ENST00000328159 NUP107P57740 925 aa13.96□□□□□ -0.17
TPM3-205ENST00000328159 SMIM11AP58511 58 aa13.96□□□□□ -0.17
TPM3-205ENST00000328159 ESRRGP62508 458 aa13.96□□□□□ -0.17
TPM3-205ENST00000328159 FOXD4Q12950 439 aaPredicted RBP13.96□□□□□ -0.17
TPM3-205ENST00000328159 FGD3Q5JSP0 725 aa13.96□□□□□ -0.17
TPM3-205ENST00000328159 TCTE1Q5JU00 501 aa13.96□□□□□ -0.17
TPM3-205ENST00000328159 EXOSC6Q5RKV6 272 aaKnown RBP13.96□□□□□ -0.17
TPM3-205ENST00000328159 GARNL3Q5VVW2 1013 aa13.96□□□□□ -0.17
TPM3-205ENST00000328159 BROXQ5VW32 411 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms