RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 CALHM3Q86XJ0 350 aa11.97□□□□□ -0.49
DDX39A-202ENST00000324340 PTRH1Q86Y79 214 aaKnown RBP11.97□□□□□ -0.49
DDX39A-202ENST00000324340 FAM156AQ8NDB6 213 aa11.97□□□□□ -0.49
DDX39A-202ENST00000324340 TMEM52Q8NDY8 209 aa11.97□□□□□ -0.49
DDX39A-202ENST00000324340 OR7G1Q8NGA0 311 aa11.97□□□□□ -0.49
DDX39A-202ENST00000324340 AURKBQ96GD4 344 aaPredicted RBP11.97□□□□□ -0.49
DDX39A-202ENST00000324340 MED30Q96HR3 178 aa11.97□□□□□ -0.49
DDX39A-202ENST00000324340 DPH2Q9BQC3 489 aaPredicted RBP11.97□□□□□ -0.49
DDX39A-202ENST00000324340 NDC1Q9BTX1 674 aa11.97□□□□□ -0.49
DDX39A-202ENST00000324340 THUMPD3Q9BV44 507 aaKnown RBP11.97□□□□□ -0.49
DDX39A-202ENST00000324340 GLIPR2Q9H4G4 154 aa11.97□□□□□ -0.49
DDX39A-202ENST00000324340 EPS8L2Q9H6S3 715 aa11.97□□□□□ -0.49
DDX39A-202ENST00000324340 TPT1P8Q9HAU6 139 aa11.97□□□□□ -0.49
DDX39A-202ENST00000324340 SIRT3Q9NTG7 399 aaPredicted RBP11.97□□□□□ -0.49
DDX39A-202ENST00000324340 GIMAP4Q9NUV9 329 aa11.97□□□□□ -0.49
DDX39A-202ENST00000324340 NPAP1Q9NZP6 1156 aa11.97□□□□□ -0.49
DDX39A-202ENST00000324340 CRNNQ9UBG3 495 aaPredicted RBP11.97□□□□□ -0.49
DDX39A-202ENST00000324340 SRPK3Q9UPE1 567 aa11.97□□□□□ -0.49
DDX39A-202ENST00000324340 CORO2BQ9UQ03 480 aa11.97□□□□□ -0.49
DDX39A-202ENST00000324340 ENTPD4Q9Y227 616 aa11.97□□□□□ -0.49
DDX39A-202ENST00000324340 TMEM184BQ9Y519 407 aaPredicted RBP11.97□□□□□ -0.49
DDX39A-202ENST00000324340 ZNF780BQ9Y6R6 833 aa11.97□□□□□ -0.49
DDX39A-202ENST00000324340 EVPLLA8MZ36 301 aa11.96□□□□□ -0.49
DDX39A-202ENST00000324340 PROB1E7EW31 1015 aa11.96□□□□□ -0.49
DDX39A-202ENST00000324340 PLOD2O00469 737 aa11.96□□□□□ -0.49
DDX39A-202ENST00000324340 ERAL1O75616 437 aaKnown RBP11.96□□□□□ -0.49
DDX39A-202ENST00000324340 FGF5P12034 268 aa11.96□□□□□ -0.49
DDX39A-202ENST00000324340 UQCRC2P22695 453 aa11.96□□□□□ -0.49
DDX39A-202ENST00000324340 FASP25445 335 aa11.96□□□□□ -0.49
DDX39A-202ENST00000324340 MPIP34949 423 aa11.96□□□□□ -0.49
DDX39A-202ENST00000324340 MVDP53602 400 aa11.96□□□□□ -0.49
DDX39A-202ENST00000324340 SIM1P81133 766 aaPredicted RBP11.96□□□□□ -0.49
DDX39A-202ENST00000324340 E2F1Q01094 437 aa11.96□□□□□ -0.49
DDX39A-202ENST00000324340 DUSP2Q05923 314 aa11.96□□□□□ -0.49
DDX39A-202ENST00000324340 ABHD18Q0P651 414 aa11.96□□□□□ -0.49
DDX39A-202ENST00000324340 SELENBP1Q13228 472 aa11.96□□□□□ -0.49
DDX39A-202ENST00000324340 PHF19Q5T6S3 580 aa11.96□□□□□ -0.49
DDX39A-202ENST00000324340 RHBDD2Q6NTF9 364 aa11.96□□□□□ -0.49
DDX39A-202ENST00000324340 TMEM64Q6YI46 380 aa11.96□□□□□ -0.49
DDX39A-202ENST00000324340 TTLL10Q6ZVT0 673 aa11.96□□□□□ -0.49
DDX39A-202ENST00000324340 ZNF551Q7Z340 670 aaPredicted RBP11.96□□□□□ -0.49
DDX39A-202ENST00000324340 B3GNT8Q7Z7M8 397 aa11.96□□□□□ -0.49
DDX39A-202ENST00000324340 PIP4P1Q86T03 277 aa11.96□□□□□ -0.49
DDX39A-202ENST00000324340 SERPINA11Q86U17 422 aa11.96□□□□□ -0.49
DDX39A-202ENST00000324340 SHISA5Q8N114 240 aa11.96□□□□□ -0.49
DDX39A-202ENST00000324340 BMPERQ8N8U9 685 aa11.96□□□□□ -0.49
DDX39A-202ENST00000324340 PAPD5Q8NDF8 572 aaKnown RBP11.96□□□□□ -0.49
DDX39A-202ENST00000324340 AGBL5Q8NDL9 886 aa11.96□□□□□ -0.49
DDX39A-202ENST00000324340 OR4K14Q8NGD5 310 aa11.96□□□□□ -0.49
DDX39A-202ENST00000324340 ANGPTL6Q8NI99 470 aa11.96□□□□□ -0.49
DDX39A-202ENST00000324340 HPS1Q92902 700 aa11.96□□□□□ -0.49
DDX39A-202ENST00000324340 MMABQ96EY8 250 aaPredicted RBP11.96□□□□□ -0.49
DDX39A-202ENST00000324340 OR6C1Q96RD1 312 aa11.96□□□□□ -0.49
DDX39A-202ENST00000324340 BBS4Q96RK4 519 aa11.96□□□□□ -0.49
DDX39A-202ENST00000324340 CIB1Q99828 191 aa11.96□□□□□ -0.49
DDX39A-202ENST00000324340 SLC35A5Q9BS91 424 aa11.96□□□□□ -0.49
DDX39A-202ENST00000324340 CHST8Q9H2A9 424 aa11.96□□□□□ -0.49
DDX39A-202ENST00000324340 CXorf36Q9H7Y0 433 aa11.96□□□□□ -0.49
DDX39A-202ENST00000324340 AGPAT4Q9NRZ5 378 aa11.96□□□□□ -0.49
DDX39A-202ENST00000324340 FAM86C1Q9NVL1 165 aa11.96□□□□□ -0.49
DDX39A-202ENST00000324340 GMPR2Q9P2T1 348 aaKnown RBP11.96□□□□□ -0.49
DDX39A-202ENST00000324340 ZNF639Q9UID6 485 aa11.96□□□□□ -0.49
DDX39A-202ENST00000324340 RARRES3Q9UL19 164 aa11.96□□□□□ -0.49
DDX39A-202ENST00000324340 PCDHB3Q9Y5E6 796 aa11.96□□□□□ -0.49
DDX39A-202ENST00000324340 PCDHGA1Q9Y5H4 931 aa11.96□□□□□ -0.49
DDX39A-202ENST00000324340 CORINQ9Y5Q5 1042 aa11.96□□□□□ -0.49
DDX39A-202ENST00000324340 A0A1B0GX78 115 aa11.95□□□□□ -0.5
DDX39A-202ENST00000324340 SAGE2PA6NJ88 616 aa11.95□□□□□ -0.5
DDX39A-202ENST00000324340 FAM220BPB1ANY3 271 aa11.95□□□□□ -0.5
DDX39A-202ENST00000324340 FAM227AF5H4B4 570 aa11.95□□□□□ -0.5
DDX39A-202ENST00000324340 SOCS2O14508 198 aa11.95□□□□□ -0.5
DDX39A-202ENST00000324340 RFPL3O75679 317 aa11.95□□□□□ -0.5
DDX39A-202ENST00000324340 GPR75O95800 540 aa11.95□□□□□ -0.5
DDX39A-202ENST00000324340 C1QCP02747 245 aa11.95□□□□□ -0.5
DDX39A-202ENST00000324340 IFI6P09912 130 aa11.95□□□□□ -0.5
DDX39A-202ENST00000324340 ZNF182P17025 639 aaPredicted RBP11.95□□□□□ -0.5
DDX39A-202ENST00000324340 TCN1P20061 433 aaPredicted RBP11.95□□□□□ -0.5
DDX39A-202ENST00000324340 CD247P20963 164 aa11.95□□□□□ -0.5
DDX39A-202ENST00000324340 CD40LGP29965 261 aa11.95□□□□□ -0.5
DDX39A-202ENST00000324340 PPP2R1BP30154 601 aa11.95□□□□□ -0.5
DDX39A-202ENST00000324340 MSX2P35548 267 aaPredicted RBP11.95□□□□□ -0.5
DDX39A-202ENST00000324340 NCBP2P52298 156 aaKnown RBP eCLIP11.95□□□□□ -0.5
DDX39A-202ENST00000324340 ADARB1P78563 741 aaKnown RBP11.95□□□□□ -0.5
DDX39A-202ENST00000324340 IGLV3-21P80748 117 aaPredicted RBP11.95□□□□□ -0.5
DDX39A-202ENST00000324340 CHRNEQ04844 493 aa11.95□□□□□ -0.5
DDX39A-202ENST00000324340 VAC14Q08AM6 782 aa11.95□□□□□ -0.5
DDX39A-202ENST00000324340 EPS8Q12929 822 aa11.95□□□□□ -0.5
DDX39A-202ENST00000324340 HSPB3Q12988 150 aa11.95□□□□□ -0.5
DDX39A-202ENST00000324340 DSG2Q14126 1118 aa11.95□□□□□ -0.5
DDX39A-202ENST00000324340 IL11RAQ14626 422 aa11.95□□□□□ -0.5
DDX39A-202ENST00000324340 PRAMEF17Q5VTA0 474 aa11.95□□□□□ -0.5
DDX39A-202ENST00000324340 CDCP2Q5VXM1 449 aa11.95□□□□□ -0.5
DDX39A-202ENST00000324340 CPZQ66K79 652 aa11.95□□□□□ -0.5
DDX39A-202ENST00000324340 LCN8Q6JVE9 175 aa11.95□□□□□ -0.5
DDX39A-202ENST00000324340 GLRX5Q86SX6 157 aa11.95□□□□□ -0.5
DDX39A-202ENST00000324340 ZNF595Q8IYB9 648 aa11.95□□□□□ -0.5
DDX39A-202ENST00000324340 C10orf111Q8N326 155 aa11.95□□□□□ -0.5
DDX39A-202ENST00000324340 LRRC25Q8N386 305 aaPredicted RBP11.95□□□□□ -0.5
DDX39A-202ENST00000324340 OR52N2Q8NGI0 321 aa11.95□□□□□ -0.5
DDX39A-202ENST00000324340 OR51Q1Q8NH59 317 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms