RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 UNC50Q53HI1 259 aa6.74□□□□□ -1.33
SMC1A-201ENST00000322213 SLC9B2Q86UD5 537 aa6.74□□□□□ -1.33
SMC1A-201ENST00000322213 COMTD1Q86VU5 262 aa6.74□□□□□ -1.33
SMC1A-201ENST00000322213 CNTN4Q8IWV2 1026 aa6.74□□□□□ -1.33
SMC1A-201ENST00000322213 PCED1BQ96HM7 432 aa6.74□□□□□ -1.33
SMC1A-201ENST00000322213 RAD9AQ99638 391 aa6.74□□□□□ -1.33
SMC1A-201ENST00000322213 YIPF4Q9BSR8 244 aa6.74□□□□□ -1.33
SMC1A-201ENST00000322213 GAREM1Q9H706 876 aa6.74□□□□□ -1.33
SMC1A-201ENST00000322213 TMEM39AQ9NV64 488 aa6.74□□□□□ -1.33
SMC1A-201ENST00000322213 NENFQ9UMX5 172 aa6.74□□□□□ -1.33
SMC1A-201ENST00000322213 GGT3PA6NGU5 568 aa6.74□□□□□ -1.33
SMC1A-201ENST00000322213 GPR25O00155 361 aa6.74□□□□□ -1.33
SMC1A-201ENST00000322213 ANKRD28O15084 1053 aa6.74□□□□□ -1.33
SMC1A-201ENST00000322213 TUBG1P23258 451 aa6.74□□□□□ -1.33
SMC1A-201ENST00000322213 RACK1P63244 317 aaKnown RBP6.74□□□□□ -1.33
SMC1A-201ENST00000322213 CHRNA6Q15825 494 aa6.74□□□□□ -1.33
SMC1A-201ENST00000322213 LIPJQ5W064 366 aa6.74□□□□□ -1.33
SMC1A-201ENST00000322213 HLA-DQA1Q5Y7H0 255 aa6.74□□□□□ -1.33
SMC1A-201ENST00000322213 ZNF546Q86UE3 836 aa6.74□□□□□ -1.33
SMC1A-201ENST00000322213 PLD4Q96BZ4 506 aa6.74□□□□□ -1.33
SMC1A-201ENST00000322213 NSUN5Q96P11 429 aaKnown RBP6.74□□□□□ -1.33
SMC1A-201ENST00000322213 OR5B12Q96R08 314 aa6.74□□□□□ -1.33
SMC1A-201ENST00000322213 SLC19A3Q9BZV2 496 aa6.74□□□□□ -1.33
SMC1A-201ENST00000322213 A0A1W2PRB8 838 aa6.74□□□□□ -1.33
SMC1A-201ENST00000322213 IQCF5A8MTL0 148 aa6.74□□□□□ -1.33
SMC1A-201ENST00000322213 NEDD8-MDP1E9PL57 170 aa6.74□□□□□ -1.33
SMC1A-201ENST00000322213 POMCP01189 267 aa6.74□□□□□ -1.33
SMC1A-201ENST00000322213 CDKN2DP55273 166 aa6.74□□□□□ -1.33
SMC1A-201ENST00000322213 KCNC3Q14003 757 aa6.74□□□□□ -1.33
SMC1A-201ENST00000322213 ZNF563Q8TA94 476 aa6.74□□□□□ -1.33
SMC1A-201ENST00000322213 C11orf54Q9H0W9 315 aaPredicted RBP6.74□□□□□ -1.33
SMC1A-201ENST00000322213 OR51I1Q9H343 314 aa6.74□□□□□ -1.33
SMC1A-201ENST00000322213 SLC2A6Q9UGQ3 507 aa6.74□□□□□ -1.33
SMC1A-201ENST00000322213 RHPN2P1A8MT19 583 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 B4GALT5O43286 388 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 TBL1XO60907 577 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 PDYNP01213 254 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 UGT2B7P16662 529 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 DRD5P21918 477 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 PTH2RP49190 550 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 LILRA4P59901 499 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 MRPS10P82664 201 aaKnown RBP6.73□□□□□ -1.33
SMC1A-201ENST00000322213 BAMBIQ13145 260 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 PCGF3Q3KNV8 242 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 TEX261Q6UWH6 196 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 PHYKPLQ8IUZ5 450 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 CFAP52Q8N1V2 620 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 KCT2Q8NC54 265 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 PAQR8Q8TEZ7 354 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 MOAP1Q96BY2 351 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 PRMT6Q96LA8 375 aaPredicted RBP6.73□□□□□ -1.33
SMC1A-201ENST00000322213 P2RY13Q9BPV8 354 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 HDHD5Q9BXW7 423 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 BRF2Q9HAW0 419 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 GPR45Q9Y5Y3 372 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 U3KQ87 197 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 TRBV2A0A0J9YWF9 115 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 METTL15A6NJ78 407 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 NPC1O15118 1278 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 SMAD9O15198 467 aaKnown RBP6.73□□□□□ -1.33
SMC1A-201ENST00000322213 ZNF821O75541 412 aaPredicted RBP6.73□□□□□ -1.33
SMC1A-201ENST00000322213 HSD3B1P14060 373 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 RAB4AP20338 218 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 HSD3B2P26439 372 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 CASP9P55211 416 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 CDNFQ49AH0 187 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 PAN3Q58A45 887 aaKnown RBP6.73□□□□□ -1.33
SMC1A-201ENST00000322213 KDM4DQ6B0I6 523 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 KCTD13Q8WZ19 329 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 ZNF566Q969W8 418 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 OTUB2Q96DC9 234 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 IL12RB2Q99665 862 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 ALG8Q9BVK2 526 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 ARHGAP39Q9C0H5 1083 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 SMOC2Q9H3U7 446 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 NLE1Q9NVX2 485 aaPredicted RBP6.73□□□□□ -1.33
SMC1A-201ENST00000322213 FBXL4Q9UKA2 621 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 ZNF541Q9H0D2 1346 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 TVP23AA6NH52 213 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 SEC14L5O43304 696 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 MT-ND4P03905 459 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 DYRK1AQ13627 763 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 MTFR2Q6P444 385 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 C1orf52Q8N6N3 182 aaKnown RBP6.73□□□□□ -1.33
SMC1A-201ENST00000322213 OR10K1Q8NGX5 313 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 PGLYRP2Q96PD5 576 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 HMX1Q9NP08 348 aaPredicted RBP6.73□□□□□ -1.33
SMC1A-201ENST00000322213 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 A0A0A6YYJ9 748 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 FMO6PO60774 539 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 CH25HO95992 272 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 CYP17A1P05093 508 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 ETFAP13804 333 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 PTPRAP18433 802 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 S100A11P31949 105 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 AP1S1P61966 158 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 VARS2Q5ST30 1063 aaKnown RBP6.73□□□□□ -1.33
SMC1A-201ENST00000322213 OR10K2Q6IF99 312 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 KLBQ86Z14 1044 aa6.73□□□□□ -1.33
SMC1A-201ENST00000322213 BEND7Q8N7W2 519 aaPredicted RBP6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms