RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 CLK1P49759 484 aaKnown RBP12.33□□□□□ -0.44
CPNE1-201ENST00000317677 CCR5P51681 352 aa12.33□□□□□ -0.44
CPNE1-201ENST00000317677 C2orf80Q0P641 193 aa12.33□□□□□ -0.44
CPNE1-201ENST00000317677 KRT33BQ14525 404 aa12.33□□□□□ -0.44
CPNE1-201ENST00000317677 ENPP6Q6UWR7 440 aa12.33□□□□□ -0.44
CPNE1-201ENST00000317677 UTS2BQ765I0 119 aa12.33□□□□□ -0.44
CPNE1-201ENST00000317677 AMIGO1Q86WK6 493 aa12.33□□□□□ -0.44
CPNE1-201ENST00000317677 OR2L3Q8NG85 312 aa12.33□□□□□ -0.44
CPNE1-201ENST00000317677 OR4M1Q8NGD0 313 aa12.33□□□□□ -0.44
CPNE1-201ENST00000317677 FLVCR1-AS1Q8TAF5 88 aa12.33□□□□□ -0.44
CPNE1-201ENST00000317677 PATE1Q8WXA2 126 aa12.33□□□□□ -0.44
CPNE1-201ENST00000317677 CIDECQ96AQ7 238 aaPredicted RBP12.33□□□□□ -0.44
CPNE1-201ENST00000317677 SEPHS2Q99611 448 aa12.33□□□□□ -0.44
CPNE1-201ENST00000317677 GPR174Q9BXC1 333 aa12.33□□□□□ -0.44
CPNE1-201ENST00000317677 RAB11FIP5Q9BXF6 653 aa12.33□□□□□ -0.44
CPNE1-201ENST00000317677 TPSD1Q9BZJ3 242 aa12.33□□□□□ -0.44
CPNE1-201ENST00000317677 FOXQ1Q9C009 403 aa12.33□□□□□ -0.44
CPNE1-201ENST00000317677 RANGRFQ9HD47 186 aaPredicted RBP12.33□□□□□ -0.44
CPNE1-201ENST00000317677 SH3BP4Q9P0V3 963 aa12.33□□□□□ -0.44
CPNE1-201ENST00000317677 UTS2RQ9UKP6 389 aa12.33□□□□□ -0.44
CPNE1-201ENST00000317677 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.33□□□□□ -0.44
CPNE1-201ENST00000317677 CLIC1O00299 241 aa12.32□□□□□ -0.44
CPNE1-201ENST00000317677 BTN3A3O00478 584 aa12.32□□□□□ -0.44
CPNE1-201ENST00000317677 CXCR6O00574 342 aa12.32□□□□□ -0.44
CPNE1-201ENST00000317677 SSX4O60224 188 aa12.32□□□□□ -0.44
CPNE1-201ENST00000317677 C1QBP02746 253 aa12.32□□□□□ -0.44
CPNE1-201ENST00000317677 CSTF2P33240 577 aaKnown RBP eCLIP12.32□□□□□ -0.442e-45■■■■■ 66.1
CPNE1-201ENST00000317677 NHLH1Q02575 133 aa12.32□□□□□ -0.44
CPNE1-201ENST00000317677 ABHD18Q0P651 414 aa12.32□□□□□ -0.44
CPNE1-201ENST00000317677 HYAL2Q12891 473 aa12.32□□□□□ -0.44
CPNE1-201ENST00000317677 FOXD4Q12950 439 aaPredicted RBP12.32□□□□□ -0.44
CPNE1-201ENST00000317677 EFR3AQ14156 821 aa12.32□□□□□ -0.44
CPNE1-201ENST00000317677 FAM98BQ52LJ0 330 aaKnown RBP12.32□□□□□ -0.44
CPNE1-201ENST00000317677 KIAA1614Q5VZ46 1190 aa12.32□□□□□ -0.44
CPNE1-201ENST00000317677 ZNF621Q6ZSS3 439 aa12.32□□□□□ -0.44
CPNE1-201ENST00000317677 PTOV1Q86YD1 416 aa12.32□□□□□ -0.44
CPNE1-201ENST00000317677 RAB42Q8N4Z0 105 aa12.32□□□□□ -0.44
CPNE1-201ENST00000317677 PRSS33Q8NF86 280 aa12.32□□□□□ -0.44
CPNE1-201ENST00000317677 KBTBD8Q8NFY9 601 aa12.32□□□□□ -0.44
CPNE1-201ENST00000317677 IPCEF1Q8WWN9 437 aaPredicted RBP12.32□□□□□ -0.44
CPNE1-201ENST00000317677 FAM120BQ96EK7 910 aaKnown RBP12.32□□□□□ -0.44
CPNE1-201ENST00000317677 SIGLEC11Q96RL6 698 aa12.32□□□□□ -0.44
CPNE1-201ENST00000317677 BHLHE41Q9C0J9 482 aaPredicted RBP12.32□□□□□ -0.44
CPNE1-201ENST00000317677 ABCG4Q9H172 646 aa12.32□□□□□ -0.44
CPNE1-201ENST00000317677 CHST8Q9H2A9 424 aa12.32□□□□□ -0.44
CPNE1-201ENST00000317677 SCPEP1Q9HB40 452 aa12.32□□□□□ -0.44
CPNE1-201ENST00000317677 NOSIPQ9Y314 301 aaKnown RBP12.32□□□□□ -0.44
CPNE1-201ENST00000317677 IGHV1OR15-9A0A0B4J2B8 117 aa12.32□□□□□ -0.44
CPNE1-201ENST00000317677 A8MV72 311 aaPredicted RBP12.32□□□□□ -0.44
CPNE1-201ENST00000317677 PRAMEF26H0Y7S4 382 aa12.32□□□□□ -0.44
CPNE1-201ENST00000317677 TOR1AO14656 332 aa12.32□□□□□ -0.44
CPNE1-201ENST00000317677 NDUFS4O43181 175 aa12.32□□□□□ -0.44
CPNE1-201ENST00000317677 GALR2O43603 387 aaPredicted RBP12.32□□□□□ -0.44
CPNE1-201ENST00000317677 RGS10O43665 173 aa12.32□□□□□ -0.44
CPNE1-201ENST00000317677 AIREO43918 545 aa12.32□□□□□ -0.44
CPNE1-201ENST00000317677 TMPRSS11DO60235 418 aa12.32□□□□□ -0.44
CPNE1-201ENST00000317677 IFNA16P05015 189 aa12.32□□□□□ -0.44
CPNE1-201ENST00000317677 CHRM5P08912 532 aaPredicted RBP12.32□□□□□ -0.44
CPNE1-201ENST00000317677 GPX2P18283 190 aa12.32□□□□□ -0.44
CPNE1-201ENST00000317677 ATF4P18848 351 aaPredicted RBP12.32□□□□□ -0.44
CPNE1-201ENST00000317677 CBLP22681 906 aa12.32□□□□□ -0.44
CPNE1-201ENST00000317677 LIMK1P53667 647 aa12.32□□□□□ -0.44
CPNE1-201ENST00000317677 ZIC1Q15915 447 aa12.32□□□□□ -0.44
CPNE1-201ENST00000317677 ZNF542PQ5EBM4 170 aa12.32□□□□□ -0.44
CPNE1-201ENST00000317677 ZNF425Q6IV72 752 aa12.32□□□□□ -0.44
CPNE1-201ENST00000317677 ADCK2Q7Z695 626 aa12.32□□□□□ -0.44
CPNE1-201ENST00000317677 ZZZ3Q8IYH5 903 aa12.32□□□□□ -0.44
CPNE1-201ENST00000317677 TMEM105Q8N8V8 129 aa12.32□□□□□ -0.44
CPNE1-201ENST00000317677 DTX3Q8N9I9 347 aa12.32□□□□□ -0.44
CPNE1-201ENST00000317677 OR4E2Q8NGC2 313 aa12.32□□□□□ -0.44
CPNE1-201ENST00000317677 NETO1Q8TDF5 533 aa12.32□□□□□ -0.44
CPNE1-201ENST00000317677 UCN3Q969E3 161 aa12.32□□□□□ -0.44
CPNE1-201ENST00000317677 TM4SF18Q96CE8 201 aa12.32□□□□□ -0.44
CPNE1-201ENST00000317677 CXorf40BQ96DE9 158 aa12.32□□□□□ -0.44
CPNE1-201ENST00000317677 FYTTD1Q96QD9 318 aaKnown RBP12.32□□□□□ -0.44
CPNE1-201ENST00000317677 MACROD1Q9BQ69 325 aa12.32□□□□□ -0.44
CPNE1-201ENST00000317677 GTPBP2Q9BX10 602 aaKnown RBP12.32□□□□□ -0.44
CPNE1-201ENST00000317677 ITPAQ9BY32 194 aa12.32□□□□□ -0.44
CPNE1-201ENST00000317677 PITHD1Q9GZP4 211 aaPredicted RBP12.32□□□□□ -0.44
CPNE1-201ENST00000317677 KLHL31Q9H511 634 aa12.32□□□□□ -0.44
CPNE1-201ENST00000317677 MRPS30Q9NP92 439 aaKnown RBP12.32□□□□□ -0.44
CPNE1-201ENST00000317677 GPATCH2Q9NW75 528 aa12.32□□□□□ -0.44
CPNE1-201ENST00000317677 ADGRE2Q9UHX3 823 aa12.32□□□□□ -0.44
CPNE1-201ENST00000317677 TEKT2Q9UIF3 430 aa12.32□□□□□ -0.44
CPNE1-201ENST00000317677 HEBP2Q9Y5Z4 205 aa12.32□□□□□ -0.44
CPNE1-201ENST00000317677 TDRD6O60522 2096 aaKnown RBP12.31□□□□□ -0.44
CPNE1-201ENST00000317677 A0A0G2JN53 185 aa12.31□□□□□ -0.44
CPNE1-201ENST00000317677 TRBC2A0A5B9 178 aa12.31□□□□□ -0.44
CPNE1-201ENST00000317677 RNASET2O00584 256 aaKnown RBP12.31□□□□□ -0.44
CPNE1-201ENST00000317677 XPNPEP2O43895 674 aa12.31□□□□□ -0.44
CPNE1-201ENST00000317677 CREG1O75629 220 aa12.31□□□□□ -0.44
CPNE1-201ENST00000317677 KCNK5O95279 499 aa12.31□□□□□ -0.44
CPNE1-201ENST00000317677 F3P13726 295 aa12.31□□□□□ -0.44
CPNE1-201ENST00000317677 RABIFP47224 123 aa12.31□□□□□ -0.44
CPNE1-201ENST00000317677 MVDP53602 400 aa12.31□□□□□ -0.44
CPNE1-201ENST00000317677 HBA1P69905 142 aa12.31□□□□□ -0.44
CPNE1-201ENST00000317677 RIN1Q13671 783 aa12.31□□□□□ -0.44
CPNE1-201ENST00000317677 FZD2Q14332 565 aa12.31□□□□□ -0.44
CPNE1-201ENST00000317677 ZBTB37Q5TC79 503 aa12.31□□□□□ -0.44
CPNE1-201ENST00000317677 FAM180BQ6P0A1 224 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms