RNA–Protein interactions for RNA: ENST00000310397.12

SNED1-201, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SNED1, Length 8,174 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-201ENST00000310397 ZNF300Q96RE9 604 aaPredicted RBP12.54□□□□□ -0.4
SNED1-201ENST00000310397 F5P12259 2224 aa12.54□□□□□ -0.4
SNED1-201ENST00000310397 WASHC1A8K0Z3 465 aa12.54□□□□□ -0.4
SNED1-201ENST00000310397 WASH3PC4AMC7 463 aa12.54□□□□□ -0.4
SNED1-201ENST00000310397 M0R129 80 aa12.54□□□□□ -0.4
SNED1-201ENST00000310397 AP1G1O43747 822 aa12.54□□□□□ -0.4
SNED1-201ENST00000310397 IL1AP01583 271 aa12.54□□□□□ -0.4
SNED1-201ENST00000310397 SPARCP09486 303 aa12.54□□□□□ -0.4
SNED1-201ENST00000310397 S100PP25815 95 aa12.54□□□□□ -0.4
SNED1-201ENST00000310397 METAP1DQ6UB28 335 aaPredicted RBP12.54□□□□□ -0.4
SNED1-201ENST00000310397 WASH2PQ6VEQ5 465 aa12.54□□□□□ -0.4
SNED1-201ENST00000310397 COMMD6Q7Z4G1 85 aa12.54□□□□□ -0.4
SNED1-201ENST00000310397 GPAT4Q86UL3 456 aa12.54□□□□□ -0.4
SNED1-201ENST00000310397 ZNF709Q8N972 641 aa12.54□□□□□ -0.4
SNED1-201ENST00000310397 ZSCAN1Q8NBB4 408 aa12.54□□□□□ -0.4
SNED1-201ENST00000310397 OR51A7Q8NH64 312 aa12.54□□□□□ -0.4
SNED1-201ENST00000310397 INSL5Q9Y5Q6 135 aa12.54□□□□□ -0.4
SNED1-201ENST00000310397 IFNA2P01563 188 aa12.54□□□□□ -0.4
SNED1-201ENST00000310397 LAMP1P11279 417 aa12.54□□□□□ -0.4
SNED1-201ENST00000310397 SOX3P41225 446 aa12.54□□□□□ -0.4
SNED1-201ENST00000310397 SPINT3P49223 89 aa12.54□□□□□ -0.4
SNED1-201ENST00000310397 CDNFQ49AH0 187 aa12.54□□□□□ -0.4
SNED1-201ENST00000310397 SLC7A5P1Q8MH63 180 aa12.54□□□□□ -0.4
SNED1-201ENST00000310397 DPYSL5Q9BPU6 564 aa12.54□□□□□ -0.4
SNED1-201ENST00000310397 NTMT1Q9BV86 223 aa12.54□□□□□ -0.4
SNED1-201ENST00000310397 HAPLN2Q9GZV7 340 aa12.54□□□□□ -0.4
SNED1-201ENST00000310397 CSTAP01040 98 aa12.53□□□□□ -0.4
SNED1-201ENST00000310397 SFTPBP07988 381 aa12.53□□□□□ -0.4
SNED1-201ENST00000310397 CDK10Q15131 360 aa12.53□□□□□ -0.4
SNED1-201ENST00000310397 DEFB115Q30KQ5 88 aa12.53□□□□□ -0.4
SNED1-201ENST00000310397 CCDC58Q4VC31 144 aa12.53□□□□□ -0.4
SNED1-201ENST00000310397 NKAPLQ5M9Q1 402 aa12.53□□□□□ -0.4
SNED1-201ENST00000310397 ZNF776Q68DI1 518 aaPredicted RBP12.53□□□□□ -0.4
SNED1-201ENST00000310397 GSG1LQ6UXU4 331 aa12.53□□□□□ -0.4
SNED1-201ENST00000310397 TMEM173Q86WV6 379 aaPredicted RBP12.53□□□□□ -0.4
SNED1-201ENST00000310397 LRRC28Q86X40 367 aaPredicted RBP12.53□□□□□ -0.4
SNED1-201ENST00000310397 SLC7A13Q8TCU3 470 aa12.53□□□□□ -0.4
SNED1-201ENST00000310397 SCGB1C1Q8TD33 95 aa12.53□□□□□ -0.4
SNED1-201ENST00000310397 TMEM19Q96HH6 336 aa12.53□□□□□ -0.4
SNED1-201ENST00000310397 EIF5A2Q9GZV4 153 aaKnown RBP12.53□□□□□ -0.4
SNED1-201ENST00000310397 KLHL42Q9P2K6 505 aa12.53□□□□□ -0.4
SNED1-201ENST00000310397 PHIPQ8WWQ0 1821 aa12.53□□□□□ -0.4
SNED1-201ENST00000310397 HYKKA2RU49 373 aa12.53□□□□□ -0.4
SNED1-201ENST00000310397 CTU1Q7Z7A3 348 aaKnown RBP12.53□□□□□ -0.4
SNED1-201ENST00000310397 ARL14Q8N4G2 192 aa12.53□□□□□ -0.4
SNED1-201ENST00000310397 ARL11Q969Q4 196 aa12.53□□□□□ -0.4
SNED1-201ENST00000310397 JSRP1Q96MG2 331 aaPredicted RBP12.53□□□□□ -0.4
SNED1-201ENST00000310397 PHB2Q99623 299 aa12.53□□□□□ -0.4
SNED1-201ENST00000310397 RDH14Q9HBH5 336 aa12.53□□□□□ -0.4
SNED1-201ENST00000310397 B3GAT2Q9NPZ5 323 aa12.53□□□□□ -0.4
SNED1-201ENST00000310397 ZNF623O75123 536 aa12.53□□□□□ -0.4
SNED1-201ENST00000310397 ADH1BP00325 375 aa12.53□□□□□ -0.4
SNED1-201ENST00000310397 GPR4P46093 362 aa12.53□□□□□ -0.4
SNED1-201ENST00000310397 C11orf91Q3C1V1 193 aa12.53□□□□□ -0.4
SNED1-201ENST00000310397 ALG8Q9BVK2 526 aa12.53□□□□□ -0.4
SNED1-201ENST00000310397 MVB12BQ9H7P6 319 aa12.53□□□□□ -0.4
SNED1-201ENST00000310397 TREX1Q9NSU2 369 aa12.53□□□□□ -0.4
SNED1-201ENST00000310397 ZFP57Q9NU63 452 aa12.53□□□□□ -0.4
SNED1-201ENST00000310397 EPHA6Q9UF33 1036 aa12.53□□□□□ -0.4
SNED1-201ENST00000310397 PLAGL1Q9UM63 463 aa12.53□□□□□ -0.4
SNED1-201ENST00000310397 SLC33A1O00400 549 aaPredicted RBP12.53□□□□□ -0.4
SNED1-201ENST00000310397 GABRA3P34903 492 aa12.53□□□□□ -0.4
SNED1-201ENST00000310397 MRPS10P82664 201 aaKnown RBP12.53□□□□□ -0.4
SNED1-201ENST00000310397 APOFQ13790 326 aa12.53□□□□□ -0.4
SNED1-201ENST00000310397 CHRFAM7AQ494W8 412 aa12.53□□□□□ -0.4
SNED1-201ENST00000310397 LILRB4Q8NHJ6 448 aa12.53□□□□□ -0.4
SNED1-201ENST00000310397 SUOXP51687 545 aa12.53□□□□□ -0.4
SNED1-201ENST00000310397 JAG1P78504 1218 aa12.53□□□□□ -0.4
SNED1-201ENST00000310397 FIP1L1Q6UN15 594 aaKnown RBP12.53□□□□□ -0.4
SNED1-201ENST00000310397 PIWIL3Q7Z3Z3 882 aaKnown RBP12.53□□□□□ -0.4
SNED1-201ENST00000310397 PXKQ7Z7A4 578 aa12.53□□□□□ -0.4
SNED1-201ENST00000310397 CLECL1Q8IZS7 167 aa12.53□□□□□ -0.4
SNED1-201ENST00000310397 PARP16Q8N5Y8 322 aa12.53□□□□□ -0.4
SNED1-201ENST00000310397 VRK1Q99986 396 aaPredicted RBP12.53□□□□□ -0.4
SNED1-201ENST00000310397 ZNF436Q9C0F3 470 aaPredicted RBP12.53□□□□□ -0.4
SNED1-201ENST00000310397 OR51J1Q9H342 316 aa12.53□□□□□ -0.4
SNED1-201ENST00000310397 ARNT2Q9HBZ2 717 aa12.53□□□□□ -0.4
SNED1-201ENST00000310397 CACNG2Q9Y698 323 aa12.53□□□□□ -0.4
SNED1-201ENST00000310397 ARF3P61204 181 aaPredicted RBP12.53□□□□□ -0.4
SNED1-201ENST00000310397 ARF1P84077 181 aaKnown RBP12.53□□□□□ -0.4
SNED1-201ENST00000310397 ZNF648Q5T619 568 aaPredicted RBP12.53□□□□□ -0.4
SNED1-201ENST00000310397 AGAP7PQ5VUJ5 663 aa12.53□□□□□ -0.4
SNED1-201ENST00000310397 CD200R1Q8TD46 325 aa12.53□□□□□ -0.4
SNED1-201ENST00000310397 MTHFD2LQ9H903 347 aaPredicted RBP12.53□□□□□ -0.4
SNED1-201ENST00000310397 ATG2BQ96BY7 2078 aa12.53□□□□□ -0.4
SNED1-201ENST00000310397 A0A1W2PPK0 400 aa12.53□□□□□ -0.4
SNED1-201ENST00000310397 TRAPPC13A5PLN9 417 aa12.53□□□□□ -0.4
SNED1-201ENST00000310397 TAS2R38P59533 333 aa12.53□□□□□ -0.4
SNED1-201ENST00000310397 MEF2AQ02078 507 aaPredicted RBP12.53□□□□□ -0.4
SNED1-201ENST00000310397 LRIT3Q3SXY7 679 aa12.53□□□□□ -0.4
SNED1-201ENST00000310397 OR9Q2Q8NGE9 314 aa12.53□□□□□ -0.4
SNED1-201ENST00000310397 C16orf78Q8WTQ4 265 aa12.53□□□□□ -0.4
SNED1-201ENST00000310397 GPRIN1Q7Z2K8 1008 aa12.52□□□□□ -0.4
SNED1-201ENST00000310397 GTPBP8Q8N3Z3 284 aaPredicted RBP12.52□□□□□ -0.4
SNED1-201ENST00000310397 C7orf34Q96L11 122 aa12.52□□□□□ -0.4
SNED1-201ENST00000310397 SLC6A7Q99884 636 aa12.52□□□□□ -0.4
SNED1-201ENST00000310397 TEX10Q9NXF1 929 aaPredicted RBP12.52□□□□□ -0.4
SNED1-201ENST00000310397 VNN3Q9NY84 501 aa12.52□□□□□ -0.4
SNED1-201ENST00000310397 C1orf196B1AJZ1 125 aa12.52□□□□□ -0.4
SNED1-201ENST00000310397 ACOT7O00154 380 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms