RNA–Protein interactions for RNA: ENST00000309041.11

CEP290-201, Transcript of centrosomal protein 290, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CEP290, Length 7,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-201ENST00000309041 RGPD1P0DJD0 1748 aa1.14□□□□□ -2.23
CEP290-201ENST00000309041 DISC1C4P0D8 188 aa1.14□□□□□ -2.23
CEP290-201ENST00000309041 F8VVB4 439 aa1.14□□□□□ -2.23
CEP290-201ENST00000309041 F8VWA3 439 aa1.14□□□□□ -2.23
CEP290-201ENST00000309041 GPR25O00155 361 aa1.14□□□□□ -2.23
CEP290-201ENST00000309041 MANBAO00462 879 aa1.14□□□□□ -2.23
CEP290-201ENST00000309041 EIF3HO15372 352 aaKnown RBP eCLIP1.14□□□□□ -2.23
CEP290-201ENST00000309041 TOM1O60784 492 aa1.14□□□□□ -2.23
CEP290-201ENST00000309041 BCAS1O75363 584 aaPredicted RBP1.14□□□□□ -2.23
CEP290-201ENST00000309041 OAS1P00973 400 aaKnown RBP1.14□□□□□ -2.23
CEP290-201ENST00000309041 HTR1AP08908 422 aa1.14□□□□□ -2.23
CEP290-201ENST00000309041 PPP2R1AP30153 589 aa1.14□□□□□ -2.23
CEP290-201ENST00000309041 SFNP31947 248 aa1.14□□□□□ -2.23
CEP290-201ENST00000309041 PYCR1P32322 319 aa1.14□□□□□ -2.23
CEP290-201ENST00000309041 AKR1C2P52895 323 aa1.14□□□□□ -2.23
CEP290-201ENST00000309041 TRA2BP62995 288 aaKnown RBP1.14□□□□□ -2.23
CEP290-201ENST00000309041 PSG6Q00889 435 aa1.14□□□□□ -2.23
CEP290-201ENST00000309041 FOLH1Q04609 750 aa1.14□□□□□ -2.23
CEP290-201ENST00000309041 PDCLQ13371 301 aa1.14□□□□□ -2.23
CEP290-201ENST00000309041 BMT2Q1RMZ1 405 aa1.14□□□□□ -2.23
CEP290-201ENST00000309041 TRIM16LQ309B1 348 aa1.14□□□□□ -2.23
CEP290-201ENST00000309041 KRT39Q6A163 491 aa1.14□□□□□ -2.23
CEP290-201ENST00000309041 HEATR6Q6AI08 1181 aaKnown RBP1.14□□□□□ -2.23
CEP290-201ENST00000309041 TWF2Q6IBS0 349 aaKnown RBP1.14□□□□□ -2.23
CEP290-201ENST00000309041 TMPRSS11AQ6ZMR5 421 aa1.14□□□□□ -2.23
CEP290-201ENST00000309041 ARHGAP36Q6ZRI8 547 aa1.14□□□□□ -2.23
CEP290-201ENST00000309041 C9orf47Q6ZRZ4 202 aa1.14□□□□□ -2.23
CEP290-201ENST00000309041 SPATA19Q7Z5L4 167 aa1.14□□□□□ -2.23
CEP290-201ENST00000309041 RNF152Q8N8N0 203 aa1.14□□□□□ -2.23
CEP290-201ENST00000309041 SCAIQ8N9R8 606 aa1.14□□□□□ -2.23
CEP290-201ENST00000309041 DNAJB8Q8NHS0 232 aa1.14□□□□□ -2.23
CEP290-201ENST00000309041 CREB3L4Q8TEY5 395 aa1.14□□□□□ -2.23
CEP290-201ENST00000309041 FAM222BQ8WU58 562 aa1.14□□□□□ -2.23
CEP290-201ENST00000309041 STON2Q8WXE9 905 aa1.14□□□□□ -2.23
CEP290-201ENST00000309041 RGP1Q92546 391 aaPredicted RBP1.14□□□□□ -2.23
CEP290-201ENST00000309041 ATOH1Q92858 354 aaPredicted RBP1.14□□□□□ -2.23
CEP290-201ENST00000309041 SGK3Q96BR1 496 aa1.14□□□□□ -2.23
CEP290-201ENST00000309041 ROPN1LQ96C74 230 aa1.14□□□□□ -2.23
CEP290-201ENST00000309041 NTNG2Q96CW9 530 aa1.14□□□□□ -2.23
CEP290-201ENST00000309041 RNF185Q96GF1 192 aa1.14□□□□□ -2.23
CEP290-201ENST00000309041 B3GALT6Q96L58 329 aa1.14□□□□□ -2.23
CEP290-201ENST00000309041 AMELYQ99218 206 aa1.14□□□□□ -2.23
CEP290-201ENST00000309041 SIKE1Q9BRV8 207 aa1.14□□□□□ -2.23
CEP290-201ENST00000309041 DCTN5Q9BTE1 182 aa1.14□□□□□ -2.23
CEP290-201ENST00000309041 EMC6Q9BV81 110 aa1.14□□□□□ -2.23
CEP290-201ENST00000309041 TMPRSS13Q9BYE2 586 aa1.14□□□□□ -2.23
CEP290-201ENST00000309041 ASPSCR1Q9BZE9 553 aa1.14□□□□□ -2.23
CEP290-201ENST00000309041 ZNF350Q9GZX5 532 aa1.14□□□□□ -2.23
CEP290-201ENST00000309041 MTFR1LQ9H019 292 aa1.14□□□□□ -2.23
CEP290-201ENST00000309041 TMPRSS4Q9NRS4 437 aa1.14□□□□□ -2.23
CEP290-201ENST00000309041 CHST7Q9NS84 486 aa1.14□□□□□ -2.23
CEP290-201ENST00000309041 AGPAT5Q9NUQ2 364 aa1.14□□□□□ -2.23
CEP290-201ENST00000309041 PTTG3PQ9NZH4 202 aa1.14□□□□□ -2.23
CEP290-201ENST00000309041 C19orf25Q9UFG5 118 aaPredicted RBP1.14□□□□□ -2.23
CEP290-201ENST00000309041 YBX2Q9Y2T7 364 aaKnown RBP1.14□□□□□ -2.23
CEP290-201ENST00000309041 GPR45Q9Y5Y3 372 aa1.14□□□□□ -2.23
CEP290-201ENST00000309041 CRB1P82279 1406 aa1.14□□□□□ -2.23
CEP290-201ENST00000309041 CNTNAP4Q9C0A0 1308 aa1.14□□□□□ -2.23
CEP290-201ENST00000309041 A0A1W2PQM1 296 aa1.14□□□□□ -2.23
CEP290-201ENST00000309041 A1L4Q6 167 aa1.14□□□□□ -2.23
CEP290-201ENST00000309041 SLC31A2O15432 143 aa1.14□□□□□ -2.23
CEP290-201ENST00000309041 SLC25A17O43808 307 aa1.14□□□□□ -2.23
CEP290-201ENST00000309041 TM7SF2O76062 418 aa1.14□□□□□ -2.23
CEP290-201ENST00000309041 SNAPINO95295 136 aa1.14□□□□□ -2.23
CEP290-201ENST00000309041 CALCAP01258 141 aa1.14□□□□□ -2.23
CEP290-201ENST00000309041 C1QAP02745 245 aa1.14□□□□□ -2.23
CEP290-201ENST00000309041 ICAM1P05362 532 aa1.14□□□□□ -2.23
CEP290-201ENST00000309041 THBDP07204 575 aa1.14□□□□□ -2.23
CEP290-201ENST00000309041 C8orf88P0DMB2 117 aa1.14□□□□□ -2.23
CEP290-201ENST00000309041 CD1DP15813 335 aa1.14□□□□□ -2.23
CEP290-201ENST00000309041 AZGP1P25311 298 aaKnown RBP1.14□□□□□ -2.23
CEP290-201ENST00000309041 SHMT2P34897 504 aa1.14□□□□□ -2.23
CEP290-201ENST00000309041 TGFBR2P37173 567 aa1.14□□□□□ -2.23
CEP290-201ENST00000309041 ZFP36L2P47974 494 aaKnown RBP1.14□□□□□ -2.23
CEP290-201ENST00000309041 TTPAP49638 278 aa1.14□□□□□ -2.23
CEP290-201ENST00000309041 SUMO2P61956 95 aaKnown RBP1.14□□□□□ -2.23
CEP290-201ENST00000309041 NOGQ13253 232 aa1.14□□□□□ -2.23
CEP290-201ENST00000309041 MFAP5Q13361 173 aa1.14□□□□□ -2.23
CEP290-201ENST00000309041 EFTUD2Q15029 972 aaKnown RBP eCLIP1.14□□□□□ -2.231e-5■■■□□ 16.7
CEP290-201ENST00000309041 SMN1Q16637 294 aaKnown RBP1.14□□□□□ -2.23
CEP290-201ENST00000309041 HSD17B12Q53GQ0 312 aa1.14□□□□□ -2.23
CEP290-201ENST00000309041 NOL9Q5SY16 702 aaKnown RBP1.14□□□□□ -2.23
CEP290-201ENST00000309041 MARCH8Q5T0T0 291 aa1.14□□□□□ -2.23
CEP290-201ENST00000309041 CFAP58Q5T655 872 aa1.14□□□□□ -2.23
CEP290-201ENST00000309041 THOC7Q6I9Y2 204 aaKnown RBP1.14□□□□□ -2.23
CEP290-201ENST00000309041 LRFN4Q6PJG9 635 aa1.14□□□□□ -2.23
CEP290-201ENST00000309041 CCDC137Q6PK04 289 aaKnown RBP1.14□□□□□ -2.23
CEP290-201ENST00000309041 LBX2Q6XYB7 198 aa1.14□□□□□ -2.23
CEP290-201ENST00000309041 DYMQ7RTS9 669 aa1.14□□□□□ -2.23
CEP290-201ENST00000309041 R3HCC1LQ7Z5L2 792 aaKnown RBP1.14□□□□□ -2.23
CEP290-201ENST00000309041 CCDC36Q8IYA8 594 aa1.14□□□□□ -2.23
CEP290-201ENST00000309041 ADGRF4Q8IZF3 695 aa1.14□□□□□ -2.23
CEP290-201ENST00000309041 CLYBLQ8N0X4 340 aa1.14□□□□□ -2.23
CEP290-201ENST00000309041 SMC1BQ8NDV3 1235 aa1.14□□□□□ -2.23
CEP290-201ENST00000309041 CHDHQ8NE62 594 aaPredicted RBP1.14□□□□□ -2.23
CEP290-201ENST00000309041 STEAP2Q8NFT2 490 aa1.14□□□□□ -2.23
CEP290-201ENST00000309041 OR8H1Q8NGG4 311 aa1.14□□□□□ -2.23
CEP290-201ENST00000309041 PPP1R1CQ8WVI7 109 aa1.14□□□□□ -2.23
CEP290-201ENST00000309041 BAP1Q92560 729 aa1.14□□□□□ -2.23
CEP290-201ENST00000309041 GRAMD2BQ96HH9 432 aa1.14□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms