RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 H7C417 338 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 M0R036 132 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 BANF1O75531 89 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 ATF4P18848 351 aaPredicted RBP3.83□□□□□ -1.8
USH2A-201ENST00000307340 DDCP20711 480 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 C1orf189Q5VU69 101 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 KIAA0895LQ68EN5 471 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 PLAG1Q6DJT9 500 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 NDUFAF7Q7L592 441 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 RASGRP3Q8IV61 690 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 MCEMP1Q8IX19 187 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 AKTIPQ9H8T0 292 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 TLR9Q9NR96 1032 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 REXO2Q9Y3B8 237 aaKnown RBP3.83□□□□□ -1.8
USH2A-201ENST00000307340 MFSD11O43934 449 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 VAMP5O95183 116 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 OR2T7P0C7T2 308 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 ZNF286BP0CG31 522 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 MSX1P28360 303 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 TIA1P31483 386 aaKnown RBP eCLIP3.83□□□□□ -1.8
USH2A-201ENST00000307340 PSMB10P40306 273 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 TSPAN5P62079 268 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 MKRN4PQ13434 485 aaPredicted RBP3.83□□□□□ -1.8
USH2A-201ENST00000307340 ZNF460Q14592 562 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 LBHQ53QV2 105 aaPredicted RBP3.83□□□□□ -1.8
USH2A-201ENST00000307340 C3orf33Q6P1S2 294 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 KCNIP4Q6PIL6 250 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 KANSL1Q7Z3B3 1105 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 OR2T27Q8NH04 317 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 ENY2Q9NPA8 101 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 ARID1BQ8NFD5 2236 aaPredicted RBP3.83□□□□□ -1.8
USH2A-201ENST00000307340 SMCO3A2RU48 225 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 SHOXO15266 292 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 MID1O15344 667 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 RFPL3O75679 317 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 KDELR2P33947 212 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 AQP4P55087 323 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 TAS2R19P59542 299 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 SNRPGP62308 76 aaKnown RBP3.83□□□□□ -1.8
USH2A-201ENST00000307340 MINDY4Q4G0A6 757 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 KCTD11Q693B1 232 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 ZDHHC24Q6UX98 284 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 FIBINQ8TAL6 211 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 CEP41Q9BYV8 373 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 WDR45Q9Y484 360 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 PCDHGA1Q9Y5H4 931 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 PRAMEF33A0A0G2JMD5 474 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 ACOD1A6NK06 481 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 PRAMEF10O60809 474 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 RFX2P48378 723 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 TAF10Q12962 218 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 TOMM34Q15785 309 aaPredicted RBP3.83□□□□□ -1.8
USH2A-201ENST00000307340 SSX2Q16385 188 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 EIF2S3LQ2VIR3 472 aaKnown RBP3.83□□□□□ -1.8
USH2A-201ENST00000307340 WDR5BQ86VZ2 330 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 SLC41A1Q8IVJ1 513 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 PDLIM7Q9NR12 457 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 LUZP4Q9P127 313 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 EIF3KQ9UBQ5 218 aaKnown RBP3.83□□□□□ -1.8
USH2A-201ENST00000307340 NME7Q9Y5B8 376 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 RP1P56715 2156 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 A0A075B6Q4 140 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 MROH6A6NGR9 719 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 LGI1O95970 557 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 LINC00032P0C843 101 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 ZNF92Q03936 586 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 EIF3IQ13347 325 aaKnown RBP3.83□□□□□ -1.8
USH2A-201ENST00000307340 NPY5RQ15761 445 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 WSCD2Q2TBF2 565 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 TMEM244Q5VVB8 128 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 MAMDC2Q7Z304 686 aaPredicted RBP3.83□□□□□ -1.8
USH2A-201ENST00000307340 PIAS4Q8N2W9 510 aaPredicted RBP3.83□□□□□ -1.8
USH2A-201ENST00000307340 NT5C3BQ969T7 300 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 NACC2Q96BF6 587 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 SIGLEC10Q96LC7 697 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 ALPK1Q96QP1 1244 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 TTC34A8MYJ7 566 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 L7N2F9 121 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 ZNF20P17024 532 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 JUNBP17275 347 aaPredicted RBP3.83□□□□□ -1.8
USH2A-201ENST00000307340 TNFRSF4P43489 277 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 VAMP2P63027 116 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 SP2Q02086 613 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 CACNB2Q08289 660 aaPredicted RBP3.83□□□□□ -1.8
USH2A-201ENST00000307340 ILKQ13418 452 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 MSMO1Q15800 293 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 LY6KQ17RY6 165 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 SGO1Q5FBB7 561 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 KMT5CQ86Y97 462 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 OR5B17Q8NGF7 314 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 SLC25A43Q8WUT9 341 aaPredicted RBP3.83□□□□□ -1.8
USH2A-201ENST00000307340 PLK3Q9H4B4 646 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 ADAP2Q9NPF8 381 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 RBFOX1Q9NWB1 397 aaKnown RBP3.83□□□□□ -1.8
USH2A-201ENST00000307340 C1orf123Q9NWV4 160 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 RDH8Q9NYR8 311 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 ERVK-11Q9UQG0 969 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 FKBP7Q9Y680 259 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 ADAMTSL1Q8N6G6 1762 aa3.83□□□□□ -1.8
USH2A-201ENST00000307340 TTC24A2A3L6 582 aaPredicted RBP3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms