RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 SRP9P49458 86 aaKnown RBP12.35□□□□□ -0.43
TRIM35-201ENST00000305364 EVX1P49640 407 aa12.35□□□□□ -0.43
TRIM35-201ENST00000305364 STARP49675 285 aa12.35□□□□□ -0.43
TRIM35-201ENST00000305364 EXOSC2Q13868 293 aaKnown RBP12.35□□□□□ -0.43
TRIM35-201ENST00000305364 GRIN2CQ14957 1233 aa12.35□□□□□ -0.43
TRIM35-201ENST00000305364 HSD17B12Q53GQ0 312 aa12.35□□□□□ -0.43
TRIM35-201ENST00000305364 SYT14P1Q58G82 188 aa12.35□□□□□ -0.43
TRIM35-201ENST00000305364 CEACAM19Q7Z692 300 aa12.35□□□□□ -0.43
TRIM35-201ENST00000305364 MRPL10Q7Z7H8 261 aaKnown RBP12.35□□□□□ -0.43
TRIM35-201ENST00000305364 DCAF4L2Q8NA75 395 aa12.35□□□□□ -0.43
TRIM35-201ENST00000305364 RBPMSQ93062 196 aaKnown RBP12.35□□□□□ -0.43
TRIM35-201ENST00000305364 NEIL2Q969S2 332 aa12.35□□□□□ -0.43
TRIM35-201ENST00000305364 COL26A1Q96A83 441 aa12.35□□□□□ -0.43
TRIM35-201ENST00000305364 CHFRQ96EP1 664 aa12.35□□□□□ -0.43
TRIM35-201ENST00000305364 SIGLEC11Q96RL6 698 aa12.35□□□□□ -0.43
TRIM35-201ENST00000305364 PTPN18Q99952 460 aa12.35□□□□□ -0.43
TRIM35-201ENST00000305364 SORBS1Q9BX66 1292 aaKnown RBP12.35□□□□□ -0.43
TRIM35-201ENST00000305364 EGLN3Q9H6Z9 239 aa12.35□□□□□ -0.43
TRIM35-201ENST00000305364 STOX2Q9P2F5 926 aaPredicted RBP12.35□□□□□ -0.43
TRIM35-201ENST00000305364 RASD1Q9Y272 281 aa12.35□□□□□ -0.43
TRIM35-201ENST00000305364 KNL1Q8NG31 2342 aa12.35□□□□□ -0.43
TRIM35-201ENST00000305364 A0A1W2PPL8 197 aa12.35□□□□□ -0.43
TRIM35-201ENST00000305364 J3QLW9 94 aa12.35□□□□□ -0.43
TRIM35-201ENST00000305364 FKTNO75072 461 aa12.35□□□□□ -0.43
TRIM35-201ENST00000305364 ALDOBP05062 364 aa12.35□□□□□ -0.43
TRIM35-201ENST00000305364 ASGR1P07306 291 aa12.35□□□□□ -0.43
TRIM35-201ENST00000305364 ALPPL2P10696 532 aa12.35□□□□□ -0.43
TRIM35-201ENST00000305364 ZNF19P17023 458 aa12.35□□□□□ -0.43
TRIM35-201ENST00000305364 PNLIPRP1P54315 467 aa12.35□□□□□ -0.43
TRIM35-201ENST00000305364 CRYZQ08257 329 aaKnown RBP12.35□□□□□ -0.43
TRIM35-201ENST00000305364 GLYR1Q49A26 553 aaPredicted RBP12.35□□□□□ -0.43
TRIM35-201ENST00000305364 ZNF385BQ569K4 471 aa12.35□□□□□ -0.43
TRIM35-201ENST00000305364 C9orf64Q5T6V5 341 aa12.35□□□□□ -0.43
TRIM35-201ENST00000305364 VN1R5Q7Z5H4 357 aa12.35□□□□□ -0.43
TRIM35-201ENST00000305364 SLC6A16Q9GZN6 736 aa12.35□□□□□ -0.43
TRIM35-201ENST00000305364 METTL17Q9H7H0 456 aaPredicted RBP12.35□□□□□ -0.43
TRIM35-201ENST00000305364 GPN1Q9HCN4 374 aaPredicted RBP12.35□□□□□ -0.43
TRIM35-201ENST00000305364 TRIM36Q9NQ86 728 aa12.35□□□□□ -0.43
TRIM35-201ENST00000305364 NANSQ9NR45 359 aa12.35□□□□□ -0.43
TRIM35-201ENST00000305364 FTSJ1Q9UET6 329 aa12.35□□□□□ -0.43
TRIM35-201ENST00000305364 ASB4Q9Y574 426 aa12.35□□□□□ -0.43
TRIM35-201ENST00000305364 TSPAN6O43657 245 aa12.34□□□□□ -0.43
TRIM35-201ENST00000305364 ACP2P11117 423 aa12.34□□□□□ -0.43
TRIM35-201ENST00000305364 TNK1Q13470 666 aa12.34□□□□□ -0.43
TRIM35-201ENST00000305364 WASH2PQ6VEQ5 465 aa12.34□□□□□ -0.43
TRIM35-201ENST00000305364 REM2Q8IYK8 340 aaPredicted RBP12.34□□□□□ -0.43
TRIM35-201ENST00000305364 TTC9Q92623 222 aa12.34□□□□□ -0.43
TRIM35-201ENST00000305364 RIOK2Q9BVS4 552 aaKnown RBP12.34□□□□□ -0.43
TRIM35-201ENST00000305364 MGAT4CQ9UBM8 478 aa12.34□□□□□ -0.43
TRIM35-201ENST00000305364 DPP7Q9UHL4 492 aa12.34□□□□□ -0.43
TRIM35-201ENST00000305364 LRRN3E7EW58 273 aa12.34□□□□□ -0.43
TRIM35-201ENST00000305364 CPEP16870 476 aa12.34□□□□□ -0.43
TRIM35-201ENST00000305364 SDHBP21912 280 aa12.34□□□□□ -0.43
TRIM35-201ENST00000305364 CFL1P23528 166 aaKnown RBP12.34□□□□□ -0.43
TRIM35-201ENST00000305364 ACVR1BP36896 505 aa12.34□□□□□ -0.43
TRIM35-201ENST00000305364 SSR2P43308 183 aa12.34□□□□□ -0.43
TRIM35-201ENST00000305364 PSMA6P60900 246 aaKnown RBP12.34□□□□□ -0.43
TRIM35-201ENST00000305364 KCNC3Q14003 757 aa12.34□□□□□ -0.43
TRIM35-201ENST00000305364 ZDHHC20Q5W0Z9 365 aa12.34□□□□□ -0.43
TRIM35-201ENST00000305364 ALG1LQ6GMV1 187 aa12.34□□□□□ -0.43
TRIM35-201ENST00000305364 LYPD4Q6UWN0 246 aa12.34□□□□□ -0.43
TRIM35-201ENST00000305364 TRMT10AQ8TBZ6 339 aaKnown RBP12.34□□□□□ -0.43
TRIM35-201ENST00000305364 SLC7A13Q8TCU3 470 aa12.34□□□□□ -0.43
TRIM35-201ENST00000305364 LINC00597Q9H2U6 94 aa12.34□□□□□ -0.43
TRIM35-201ENST00000305364 LRRN3Q9H3W5 708 aa12.34□□□□□ -0.43
TRIM35-201ENST00000305364 RC3H2Q9HBD1 1191 aaKnown RBP12.34□□□□□ -0.43
TRIM35-201ENST00000305364 A0A1B0GVI7 797 aa12.34□□□□□ -0.43
TRIM35-201ENST00000305364 SLC16A5O15375 505 aa12.34□□□□□ -0.43
TRIM35-201ENST00000305364 ETHE1O95571 254 aa12.34□□□□□ -0.43
TRIM35-201ENST00000305364 KLKB1P03952 638 aa12.34□□□□□ -0.43
TRIM35-201ENST00000305364 ELK1P19419 428 aa12.34□□□□□ -0.43
TRIM35-201ENST00000305364 F8A1P23610 371 aa12.34□□□□□ -0.43
TRIM35-201ENST00000305364 GMFBP60983 142 aa12.34□□□□□ -0.43
TRIM35-201ENST00000305364 GNA13Q14344 377 aa12.34□□□□□ -0.43
TRIM35-201ENST00000305364 KANSL1Q7Z3B3 1105 aa12.34□□□□□ -0.43
TRIM35-201ENST00000305364 C17orf64Q86WR6 236 aa12.34□□□□□ -0.43
TRIM35-201ENST00000305364 ADGRF3Q8IZF5 1079 aa12.34□□□□□ -0.43
TRIM35-201ENST00000305364 HORMAD2Q8N7B1 307 aa12.34□□□□□ -0.43
TRIM35-201ENST00000305364 ZBTB44Q8NCP5 570 aa12.34□□□□□ -0.43
TRIM35-201ENST00000305364 FBXO22Q8NEZ5 403 aa12.34□□□□□ -0.43
TRIM35-201ENST00000305364 SLC38A5Q8WUX1 472 aa12.34□□□□□ -0.43
TRIM35-201ENST00000305364 ASB12Q8WXK4 309 aa12.34□□□□□ -0.43
TRIM35-201ENST00000305364 EID2BQ96D98 161 aa12.34□□□□□ -0.43
TRIM35-201ENST00000305364 CXorf40BQ96DE9 158 aa12.34□□□□□ -0.43
TRIM35-201ENST00000305364 SGTBQ96EQ0 304 aa12.34□□□□□ -0.43
TRIM35-201ENST00000305364 RNF170Q96K19 258 aa12.34□□□□□ -0.43
TRIM35-201ENST00000305364 MLXQ9UH92 298 aa12.34□□□□□ -0.43
TRIM35-201ENST00000305364 ENTPD4Q9Y227 616 aa12.34□□□□□ -0.43
TRIM35-201ENST00000305364 NUBP2Q9Y5Y2 271 aa12.34□□□□□ -0.43
TRIM35-201ENST00000305364 CCDC88CQ9P219 2028 aa12.34□□□□□ -0.43
TRIM35-201ENST00000305364 MYADML2A6NDP7 307 aa12.33□□□□□ -0.44
TRIM35-201ENST00000305364 KPNA3O00505 521 aaPredicted RBP12.33□□□□□ -0.44
TRIM35-201ENST00000305364 UGDHO60701 494 aa12.33□□□□□ -0.44
TRIM35-201ENST00000305364 MMP20O60882 483 aa12.33□□□□□ -0.44
TRIM35-201ENST00000305364 SYPP08247 313 aa12.33□□□□□ -0.44
TRIM35-201ENST00000305364 PFN3P60673 137 aa12.33□□□□□ -0.44
TRIM35-201ENST00000305364 C3orf38Q5JPI3 329 aa12.33□□□□□ -0.44
TRIM35-201ENST00000305364 ACSM5Q6NUN0 579 aa12.33□□□□□ -0.44
TRIM35-201ENST00000305364 FBXL6Q8N531 539 aa12.33□□□□□ -0.44
TRIM35-201ENST00000305364 LINC00471Q8N535 108 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms