RNA–Protein interactions for RNA: ENST00000301843.12

CTTN-201, Transcript of cortactin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTTN, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-201ENST00000301843 ZNF354BQ96LW1 612 aa12.77□□□□□ -0.36
CTTN-201ENST00000301843 SGPP1Q9BX95 441 aa12.77□□□□□ -0.36
CTTN-201ENST00000301843 MCUBQ9NWR8 336 aa12.77□□□□□ -0.36
CTTN-201ENST00000301843 CSNK1G3Q9Y6M4 447 aa12.77□□□□□ -0.36
CTTN-201ENST00000301843 SNRNP200O75643 2136 aaKnown RBP12.77□□□□□ -0.36
CTTN-201ENST00000301843 ISM1B1AKI9 464 aa12.77□□□□□ -0.37
CTTN-201ENST00000301843 FOXE1O00358 373 aaPredicted RBP12.77□□□□□ -0.37
CTTN-201ENST00000301843 FAAHO00519 579 aa12.77□□□□□ -0.37
CTTN-201ENST00000301843 DDCP20711 480 aa12.77□□□□□ -0.37
CTTN-201ENST00000301843 DUSP2Q05923 314 aa12.77□□□□□ -0.37
CTTN-201ENST00000301843 ZNF805Q5CZA5 627 aa12.77□□□□□ -0.37
CTTN-201ENST00000301843 FAM27D1Q5T7N8 215 aa12.77□□□□□ -0.37
CTTN-201ENST00000301843 PRICKLE2Q7Z3G6 844 aa12.77□□□□□ -0.37
CTTN-201ENST00000301843 C12orf40Q86WS4 652 aa12.77□□□□□ -0.37
CTTN-201ENST00000301843 CCDC116Q8IYX3 515 aa12.77□□□□□ -0.37
CTTN-201ENST00000301843 KAT2AQ92830 837 aa12.77□□□□□ -0.37
CTTN-201ENST00000301843 SENP5Q96HI0 755 aaPredicted RBP12.77□□□□□ -0.37
CTTN-201ENST00000301843 MRGPRX3Q96LB0 322 aa12.77□□□□□ -0.37
CTTN-201ENST00000301843 ZDHHC5Q9C0B5 715 aa12.77□□□□□ -0.37
CTTN-201ENST00000301843 LHX9Q9NQ69 397 aa12.77□□□□□ -0.37
CTTN-201ENST00000301843 GRIP1Q9Y3R0 1128 aa12.77□□□□□ -0.37
CTTN-201ENST00000301843 PRUNE2Q8WUY3 3088 aa12.77□□□□□ -0.37
CTTN-201ENST00000301843 SCO2O43819 266 aa12.77□□□□□ -0.37
CTTN-201ENST00000301843 CHRM4P08173 479 aa12.77□□□□□ -0.37
CTTN-201ENST00000301843 ACRP10323 421 aa12.77□□□□□ -0.37
CTTN-201ENST00000301843 ATP6V1E1P36543 226 aa12.77□□□□□ -0.37
CTTN-201ENST00000301843 MTFR2Q6P444 385 aa12.77□□□□□ -0.37
CTTN-201ENST00000301843 LRRTM4Q86VH4 590 aa12.77□□□□□ -0.37
CTTN-201ENST00000301843 MARCH9Q86YJ5 346 aa12.77□□□□□ -0.37
CTTN-201ENST00000301843 TIGD4Q8IY51 512 aa12.77□□□□□ -0.37
CTTN-201ENST00000301843 LRRC56Q8IYG6 542 aaPredicted RBP12.77□□□□□ -0.37
CTTN-201ENST00000301843 C19orf18Q8NEA5 215 aa12.77□□□□□ -0.37
CTTN-201ENST00000301843 SNAPC3Q92966 411 aa12.77□□□□□ -0.37
CTTN-201ENST00000301843 UPRTQ96BW1 309 aa12.77□□□□□ -0.37
CTTN-201ENST00000301843 CXorf40BQ96DE9 158 aa12.77□□□□□ -0.37
CTTN-201ENST00000301843 VWCEQ96DN2 955 aa12.77□□□□□ -0.37
CTTN-201ENST00000301843 SAP130Q9H0E3 1048 aa12.77□□□□□ -0.37
CTTN-201ENST00000301843 KLHL31Q9H511 634 aa12.77□□□□□ -0.37
CTTN-201ENST00000301843 SPHK2Q9NRA0 654 aa12.77□□□□□ -0.37
CTTN-201ENST00000301843 MAFFQ9ULX9 164 aa12.77□□□□□ -0.37
CTTN-201ENST00000301843 CLCA2Q9UQC9 943 aa12.77□□□□□ -0.37
CTTN-201ENST00000301843 MYO9BQ13459 2157 aa12.76□□□□□ -0.37
CTTN-201ENST00000301843 CXorf51AA0A1B0GTR3 108 aa12.76□□□□□ -0.37
CTTN-201ENST00000301843 FAM240BA0A1B0GVZ2 78 aa12.76□□□□□ -0.37
CTTN-201ENST00000301843 PRR23AA6NEV1 266 aa12.76□□□□□ -0.37
CTTN-201ENST00000301843 PLOD3O60568 738 aa12.76□□□□□ -0.37
CTTN-201ENST00000301843 NR2F6P10588 404 aa12.76□□□□□ -0.37
CTTN-201ENST00000301843 CHRNB1P11230 501 aa12.76□□□□□ -0.37
CTTN-201ENST00000301843 PIPP12273 146 aaPredicted RBP12.76□□□□□ -0.37
CTTN-201ENST00000301843 NNMTP40261 264 aa12.76□□□□□ -0.37
CTTN-201ENST00000301843 WNT4P56705 351 aa12.76□□□□□ -0.37
CTTN-201ENST00000301843 STXBP1P61764 594 aaKnown RBP12.76□□□□□ -0.37
CTTN-201ENST00000301843 CAMK2BQ13554 666 aa12.76□□□□□ -0.37
CTTN-201ENST00000301843 BTBD16Q32M84 506 aa12.76□□□□□ -0.37
CTTN-201ENST00000301843 PIP5KL1Q5T9C9 394 aa12.76□□□□□ -0.37
CTTN-201ENST00000301843 KHDRBS2Q5VWX1 349 aaKnown RBP12.76□□□□□ -0.37
CTTN-201ENST00000301843 VRK2Q86Y07 508 aa12.76□□□□□ -0.37
CTTN-201ENST00000301843 C17orf50Q8WW18 174 aa12.76□□□□□ -0.37
CTTN-201ENST00000301843 MED20Q9H944 212 aa12.76□□□□□ -0.37
CTTN-201ENST00000301843 FAM25AB3EWG3 89 aa12.76□□□□□ -0.37
CTTN-201ENST00000301843 FAM25CB3EWG5 89 aa12.76□□□□□ -0.37
CTTN-201ENST00000301843 FAM25GB3EWG6 89 aa12.76□□□□□ -0.37
CTTN-201ENST00000301843 GTPBP1O00178 669 aaKnown RBP12.76□□□□□ -0.37
CTTN-201ENST00000301843 PGRMC2O15173 223 aa12.76□□□□□ -0.37
CTTN-201ENST00000301843 SYPP08247 313 aa12.76□□□□□ -0.37
CTTN-201ENST00000301843 GNSP15586 552 aa12.76□□□□□ -0.37
CTTN-201ENST00000301843 DDX5P17844 614 aaKnown RBP12.76□□□□□ -0.37
CTTN-201ENST00000301843 EVI2BP34910 448 aa12.76□□□□□ -0.37
CTTN-201ENST00000301843 BSGP35613 385 aa12.76□□□□□ -0.37
CTTN-201ENST00000301843 SLC9A3P48764 834 aa12.76□□□□□ -0.37
CTTN-201ENST00000301843 NCBP2P52298 156 aaKnown RBP eCLIP12.76□□□□□ -0.375e-8■■□□□ 12.8
CTTN-201ENST00000301843 CNKSR3Q6P9H4 555 aa12.76□□□□□ -0.37
CTTN-201ENST00000301843 DEFB118Q96PH6 123 aa12.76□□□□□ -0.37
CTTN-201ENST00000301843 OSGEPL1Q9H4B0 414 aa12.76□□□□□ -0.37
CTTN-201ENST00000301843 GLIPR2Q9H4G4 154 aa12.76□□□□□ -0.37
CTTN-201ENST00000301843 HSPB11Q9Y547 144 aa12.76□□□□□ -0.37
CTTN-201ENST00000301843 KIAA0100Q14667 2235 aaKnown RBP12.76□□□□□ -0.37
CTTN-201ENST00000301843 ARID1BQ8NFD5 2236 aaPredicted RBP12.75□□□□□ -0.37
CTTN-201ENST00000301843 A0A087WUU8 490 aa12.75□□□□□ -0.37
CTTN-201ENST00000301843 IQCMA0A1B0GVH7 501 aa12.75□□□□□ -0.37
CTTN-201ENST00000301843 SPINT1O43278 529 aa12.75□□□□□ -0.37
CTTN-201ENST00000301843 LILRB5O75023 590 aa12.75□□□□□ -0.37
CTTN-201ENST00000301843 RB1P06400 928 aa12.75□□□□□ -0.37
CTTN-201ENST00000301843 YES1P07947 543 aa12.75□□□□□ -0.37
CTTN-201ENST00000301843 LIMS3P0CW19 117 aa12.75□□□□□ -0.37
CTTN-201ENST00000301843 LIMS4P0CW20 117 aa12.75□□□□□ -0.37
CTTN-201ENST00000301843 CSTF1Q05048 431 aaKnown RBP12.75□□□□□ -0.37
CTTN-201ENST00000301843 XKRXQ6PP77 449 aa12.75□□□□□ -0.37
CTTN-201ENST00000301843 SMARCD3Q6STE5 483 aa12.75□□□□□ -0.37
CTTN-201ENST00000301843 C17orf64Q86WR6 236 aa12.75□□□□□ -0.37
CTTN-201ENST00000301843 TMEM145Q8NBT3 493 aa12.75□□□□□ -0.37
CTTN-201ENST00000301843 KREMEN2Q8NCW0 462 aa12.75□□□□□ -0.37
CTTN-201ENST00000301843 SIMC1Q8NDZ2 872 aa12.75□□□□□ -0.37
CTTN-201ENST00000301843 SETD6Q8TBK2 473 aa12.75□□□□□ -0.37
CTTN-201ENST00000301843 TIFAQ96CG3 184 aa12.75□□□□□ -0.37
CTTN-201ENST00000301843 SLC35G5Q96KT7 338 aa12.75□□□□□ -0.37
CTTN-201ENST00000301843 LGR4Q9BXB1 951 aa12.75□□□□□ -0.37
CTTN-201ENST00000301843 ENOPH1Q9UHY7 261 aa12.75□□□□□ -0.37
CTTN-201ENST00000301843 MTCL1Q9Y4B5 1905 aaKnown RBP12.75□□□□□ -0.37
CTTN-201ENST00000301843 HIDE1A8MVS5 230 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms