RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 OR4K1Q8NGD4 311 aa11.27□□□□□ -0.61
SYNGAP1-201ENST00000293748 DEDD2Q8WXF8 326 aa11.27□□□□□ -0.61
SYNGAP1-201ENST00000293748 RANBP9Q96S59 729 aa11.27□□□□□ -0.61
SYNGAP1-201ENST00000293748 PADI2Q9Y2J8 665 aa11.27□□□□□ -0.61
SYNGAP1-201ENST00000293748 KDELR3O43731 214 aa11.26□□□□□ -0.61
SYNGAP1-201ENST00000293748 UPK1BO75841 260 aa11.26□□□□□ -0.61
SYNGAP1-201ENST00000293748 CLDN7O95471 211 aa11.26□□□□□ -0.61
SYNGAP1-201ENST00000293748 CSTBP04080 98 aaKnown RBP11.26□□□□□ -0.61
SYNGAP1-201ENST00000293748 GNSP15586 552 aa11.26□□□□□ -0.61
SYNGAP1-201ENST00000293748 VIPR1P32241 457 aa11.26□□□□□ -0.61
SYNGAP1-201ENST00000293748 GLP1RP43220 463 aa11.26□□□□□ -0.61
SYNGAP1-201ENST00000293748 ETV4P43268 484 aa11.26□□□□□ -0.61
SYNGAP1-201ENST00000293748 PGFP49763 221 aa11.26□□□□□ -0.61
SYNGAP1-201ENST00000293748 PGDP52209 483 aa11.26□□□□□ -0.61
SYNGAP1-201ENST00000293748 WDR45BQ5MNZ6 344 aa11.26□□□□□ -0.61
SYNGAP1-201ENST00000293748 TMEM69Q5SWH9 247 aa11.26□□□□□ -0.61
SYNGAP1-201ENST00000293748 FAM182AQ5T1J6 154 aa11.26□□□□□ -0.61
SYNGAP1-201ENST00000293748 GRHL2Q6ISB3 625 aa11.26□□□□□ -0.61
SYNGAP1-201ENST00000293748 SYT13Q7L8C5 426 aa11.26□□□□□ -0.61
SYNGAP1-201ENST00000293748 IGFN1Q86VF2 1251 aa11.26□□□□□ -0.61
SYNGAP1-201ENST00000293748 TMIGD2Q96BF3 282 aa11.26□□□□□ -0.61
SYNGAP1-201ENST00000293748 ZNF597Q96LX8 424 aa11.26□□□□□ -0.61
SYNGAP1-201ENST00000293748 SYT11Q9BT88 431 aa11.26□□□□□ -0.61
SYNGAP1-201ENST00000293748 Q9N2J8 555 aa11.26□□□□□ -0.61
SYNGAP1-201ENST00000293748 TMEM181Q9P2C4 612 aa11.26□□□□□ -0.61
SYNGAP1-201ENST00000293748 NLKQ9UBE8 527 aa11.26□□□□□ -0.61
SYNGAP1-201ENST00000293748 TAC3Q9UHF0 121 aa11.26□□□□□ -0.61
SYNGAP1-201ENST00000293748 EDARQ9UNE0 448 aa11.26□□□□□ -0.61
SYNGAP1-201ENST00000293748 NME4O00746 187 aa11.26□□□□□ -0.61
SYNGAP1-201ENST00000293748 TOXO94900 526 aa11.26□□□□□ -0.61
SYNGAP1-201ENST00000293748 SCGB1D2O95969 90 aa11.26□□□□□ -0.61
SYNGAP1-201ENST00000293748 CREB5Q02930 508 aa11.26□□□□□ -0.61
SYNGAP1-201ENST00000293748 COL28A1Q2UY09 1125 aa11.26□□□□□ -0.61
SYNGAP1-201ENST00000293748 PROX2Q3B8N5 592 aa11.26□□□□□ -0.61
SYNGAP1-201ENST00000293748 SLC36A3Q495N2 470 aa11.26□□□□□ -0.61
SYNGAP1-201ENST00000293748 SLC22A10Q63ZE4 541 aa11.26□□□□□ -0.61
SYNGAP1-201ENST00000293748 ALG1LQ6GMV1 187 aa11.26□□□□□ -0.61
SYNGAP1-201ENST00000293748 DUS1LQ6P1R4 473 aaKnown RBP11.26□□□□□ -0.61
SYNGAP1-201ENST00000293748 CEACAM19Q7Z692 300 aa11.26□□□□□ -0.61
SYNGAP1-201ENST00000293748 LRRTM4Q86VH4 590 aa11.26□□□□□ -0.61
SYNGAP1-201ENST00000293748 HS3ST5Q8IZT8 346 aa11.26□□□□□ -0.61
SYNGAP1-201ENST00000293748 MS4A15Q8N5U1 240 aa11.26□□□□□ -0.61
SYNGAP1-201ENST00000293748 CHDHQ8NE62 594 aaPredicted RBP11.26□□□□□ -0.61
SYNGAP1-201ENST00000293748 CYB5D2Q8WUJ1 264 aa11.26□□□□□ -0.61
SYNGAP1-201ENST00000293748 THEM6Q8WUY1 208 aa11.26□□□□□ -0.61
SYNGAP1-201ENST00000293748 SLC25A36Q96CQ1 311 aa11.26□□□□□ -0.61
SYNGAP1-201ENST00000293748 NSUN5Q96P11 429 aaKnown RBP11.26□□□□□ -0.61
SYNGAP1-201ENST00000293748 SYT4Q9H2B2 425 aa11.26□□□□□ -0.61
SYNGAP1-201ENST00000293748 SERINC1Q9NRX5 453 aa11.26□□□□□ -0.61
SYNGAP1-201ENST00000293748 SUSD2Q9UGT4 822 aa11.26□□□□□ -0.61
SYNGAP1-201ENST00000293748 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.26□□□□□ -0.61
SYNGAP1-201ENST00000293748 DRGXA6NNA5 263 aa11.26□□□□□ -0.61
SYNGAP1-201ENST00000293748 GTF2F2P13984 249 aa11.26□□□□□ -0.61
SYNGAP1-201ENST00000293748 NKX2-5P52952 324 aaPredicted RBP11.26□□□□□ -0.61
SYNGAP1-201ENST00000293748 SEMG2Q02383 582 aa11.26□□□□□ -0.61
SYNGAP1-201ENST00000293748 ALG10Q5BKT4 473 aa11.26□□□□□ -0.61
SYNGAP1-201ENST00000293748 BHLHA9Q7RTU4 235 aa11.26□□□□□ -0.61
SYNGAP1-201ENST00000293748 NSMAFQ92636 917 aa11.26□□□□□ -0.61
SYNGAP1-201ENST00000293748 IMP4Q96G21 291 aaKnown RBP11.26□□□□□ -0.61
SYNGAP1-201ENST00000293748 PFDN5Q99471 154 aa11.26□□□□□ -0.61
SYNGAP1-201ENST00000293748 NPLQ9BXD5 320 aaPredicted RBP11.26□□□□□ -0.61
SYNGAP1-201ENST00000293748 TMEM185BQ9H7F4 350 aa11.26□□□□□ -0.61
SYNGAP1-201ENST00000293748 THAP10Q9P2Z0 257 aaPredicted RBP11.26□□□□□ -0.61
SYNGAP1-201ENST00000293748 FARSAQ9Y285 508 aaKnown RBP11.26□□□□□ -0.61
SYNGAP1-201ENST00000293748 PCDHB14Q9Y5E9 798 aa11.26□□□□□ -0.61
SYNGAP1-201ENST00000293748 VILLO15195 856 aa11.26□□□□□ -0.61
SYNGAP1-201ENST00000293748 MTX2O75431 263 aa11.26□□□□□ -0.61
SYNGAP1-201ENST00000293748 ADAP00813 363 aa11.26□□□□□ -0.61
SYNGAP1-201ENST00000293748 HSD11B1P28845 292 aa11.26□□□□□ -0.61
SYNGAP1-201ENST00000293748 CLDN8P56748 225 aa11.26□□□□□ -0.61
SYNGAP1-201ENST00000293748 FAM217AQ8IXS0 508 aa11.26□□□□□ -0.61
SYNGAP1-201ENST00000293748 ACBD7Q8N6N7 88 aa11.26□□□□□ -0.61
SYNGAP1-201ENST00000293748 TFGQ92734 400 aaPredicted RBP11.26□□□□□ -0.61
SYNGAP1-201ENST00000293748 ASB4Q9Y574 426 aa11.26□□□□□ -0.61
SYNGAP1-201ENST00000293748 DNAJC15Q9Y5T4 150 aa11.26□□□□□ -0.61
SYNGAP1-201ENST00000293748 MTCL1Q9Y4B5 1905 aaKnown RBP11.26□□□□□ -0.61
SYNGAP1-201ENST00000293748 PLXNA3P51805 1871 aa11.25□□□□□ -0.61
SYNGAP1-201ENST00000293748 A0A1B0GVI7 797 aa11.25□□□□□ -0.61
SYNGAP1-201ENST00000293748 ZNF821O75541 412 aaPredicted RBP11.25□□□□□ -0.61
SYNGAP1-201ENST00000293748 POP7O75817 140 aaKnown RBP11.25□□□□□ -0.61
SYNGAP1-201ENST00000293748 S1PR4O95977 384 aa11.25□□□□□ -0.61
SYNGAP1-201ENST00000293748 RETP07949 1114 aa11.25□□□□□ -0.61
SYNGAP1-201ENST00000293748 CHMP24386 653 aa11.25□□□□□ -0.61
SYNGAP1-201ENST00000293748 FXYD6P3P58550 94 aa11.25□□□□□ -0.61
SYNGAP1-201ENST00000293748 MS4A2Q01362 244 aa11.25□□□□□ -0.61
SYNGAP1-201ENST00000293748 C14orf80Q86SX3 495 aa11.25□□□□□ -0.61
SYNGAP1-201ENST00000293748 MMAAQ8IVH4 418 aaKnown RBP11.25□□□□□ -0.61
SYNGAP1-201ENST00000293748 PAPD5Q8NDF8 572 aaKnown RBP11.25□□□□□ -0.61
SYNGAP1-201ENST00000293748 NRG4Q8WWG1 115 aa11.25□□□□□ -0.61
SYNGAP1-201ENST00000293748 PMM1Q92871 262 aa11.25□□□□□ -0.61
SYNGAP1-201ENST00000293748 FOXJ1Q92949 421 aa11.25□□□□□ -0.61
SYNGAP1-201ENST00000293748 IGSF8Q969P0 613 aa11.25□□□□□ -0.61
SYNGAP1-201ENST00000293748 RTP4Q96DX8 246 aa11.25□□□□□ -0.61
SYNGAP1-201ENST00000293748 FEVQ99581 238 aa11.25□□□□□ -0.61
SYNGAP1-201ENST00000293748 RNF121Q9H920 327 aa11.25□□□□□ -0.61
SYNGAP1-201ENST00000293748 GSKIPQ9P0R6 139 aa11.25□□□□□ -0.61
SYNGAP1-201ENST00000293748 ENPP5Q9UJA9 477 aa11.25□□□□□ -0.61
SYNGAP1-201ENST00000293748 TSC2P49815 1807 aa11.25□□□□□ -0.61
SYNGAP1-201ENST00000293748 ZNF726A6NNF4 738 aa11.25□□□□□ -0.61
SYNGAP1-201ENST00000293748 E7EQ34 232 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms