RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 PGBD2Q6P3X8 592 aa9.81□□□□□ -0.84
SKA1-201ENST00000285116 ANGPTL8Q6UXH0 198 aa9.81□□□□□ -0.84
SKA1-201ENST00000285116 Q6ZVU0 165 aa9.81□□□□□ -0.84
SKA1-201ENST00000285116 SLC9B2Q86UD5 537 aa9.81□□□□□ -0.84
SKA1-201ENST00000285116 ADIPOR2Q86V24 386 aa9.81□□□□□ -0.84
SKA1-201ENST00000285116 GHDCQ8N2G8 530 aa9.81□□□□□ -0.84
SKA1-201ENST00000285116 KCTD7Q96MP8 289 aa9.81□□□□□ -0.84
SKA1-201ENST00000285116 SPNS1Q9H2V7 528 aa9.81□□□□□ -0.84
SKA1-201ENST00000285116 PPP1R3EQ9H7J1 279 aa9.81□□□□□ -0.84
SKA1-201ENST00000285116 CXorf36Q9H7Y0 433 aa9.81□□□□□ -0.84
SKA1-201ENST00000285116 FGF20Q9NP95 211 aaPredicted RBP9.81□□□□□ -0.84
SKA1-201ENST00000285116 AHSPQ9NZD4 102 aa9.81□□□□□ -0.84
SKA1-201ENST00000285116 ACSL6Q9UKU0 697 aa9.81□□□□□ -0.84
SKA1-201ENST00000285116 HCN2Q9UL51 889 aa9.81□□□□□ -0.84
SKA1-201ENST00000285116 RAB23Q9ULC3 237 aa9.81□□□□□ -0.84
SKA1-201ENST00000285116 ING4Q9UNL4 249 aa9.81□□□□□ -0.84
SKA1-201ENST00000285116 TMEM129A0AVI4 362 aa9.8□□□□□ -0.84
SKA1-201ENST00000285116 RFXAPO00287 272 aa9.8□□□□□ -0.84
SKA1-201ENST00000285116 MMP20O60882 483 aa9.8□□□□□ -0.84
SKA1-201ENST00000285116 H1F0P07305 194 aaKnown RBP9.8□□□□□ -0.84
SKA1-201ENST00000285116 ERGP11308 486 aa9.8□□□□□ -0.84
SKA1-201ENST00000285116 IL32P24001 234 aa9.8□□□□□ -0.84
SKA1-201ENST00000285116 EVI2BP34910 448 aa9.8□□□□□ -0.84
SKA1-201ENST00000285116 XKP51811 444 aa9.8□□□□□ -0.84
SKA1-201ENST00000285116 MC1RQ01726 317 aa9.8□□□□□ -0.84
SKA1-201ENST00000285116 TAP2Q03519 686 aa9.8□□□□□ -0.84
SKA1-201ENST00000285116 RIN1Q13671 783 aa9.8□□□□□ -0.84
SKA1-201ENST00000285116 DCST1Q5T197 706 aa9.8□□□□□ -0.84
SKA1-201ENST00000285116 ANKRD54Q6NXT1 300 aa9.8□□□□□ -0.84
SKA1-201ENST00000285116 FAM129CQ86XR2 697 aa9.8□□□□□ -0.84
SKA1-201ENST00000285116 KIF18BQ86Y91 864 aa9.8□□□□□ -0.84
SKA1-201ENST00000285116 SLC37A3Q8NCC5 494 aa9.8□□□□□ -0.84
SKA1-201ENST00000285116 ZNF680Q8NEM1 530 aa9.8□□□□□ -0.84
SKA1-201ENST00000285116 LHFPL5Q8TAF8 219 aa9.8□□□□□ -0.84
SKA1-201ENST00000285116 SLC38A5Q8WUX1 472 aa9.8□□□□□ -0.84
SKA1-201ENST00000285116 IL4I1Q96RQ9 567 aa9.8□□□□□ -0.84
SKA1-201ENST00000285116 NELL2Q99435 816 aa9.8□□□□□ -0.84
SKA1-201ENST00000285116 SOSTQ9BQB4 213 aa9.8□□□□□ -0.84
SKA1-201ENST00000285116 TMEM106CQ9BVX2 250 aa9.8□□□□□ -0.84
SKA1-201ENST00000285116 ZCCHC2Q9C0B9 1178 aaKnown RBP9.8□□□□□ -0.84
SKA1-201ENST00000285116 SLC6A16Q9GZN6 736 aa9.8□□□□□ -0.84
SKA1-201ENST00000285116 PIGUQ9H490 435 aa9.8□□□□□ -0.84
SKA1-201ENST00000285116 DPEP2Q9H4A9 486 aa9.8□□□□□ -0.84
SKA1-201ENST00000285116 NT5DC2Q9H857 520 aa9.8□□□□□ -0.84
SKA1-201ENST00000285116 ZSCAN32Q9NX65 697 aa9.8□□□□□ -0.84
SKA1-201ENST00000285116 RABL2BQ9UNT1 228 aa9.8□□□□□ -0.84
SKA1-201ENST00000285116 SH2B3Q9UQQ2 575 aa9.8□□□□□ -0.84
SKA1-201ENST00000285116 ASPMQ8IZT6 3477 aa9.8□□□□□ -0.84
SKA1-201ENST00000285116 ATG2BQ96BY7 2078 aa9.8□□□□□ -0.84
SKA1-201ENST00000285116 INMT-MINDY4F8WBC2 141 aa9.8□□□□□ -0.84
SKA1-201ENST00000285116 AGRPO00253 132 aa9.8□□□□□ -0.84
SKA1-201ENST00000285116 RAB36O95755 333 aa9.8□□□□□ -0.84
SKA1-201ENST00000285116 IL3P08700 152 aa9.8□□□□□ -0.84
SKA1-201ENST00000285116 DDX6P26196 483 aaKnown RBP eCLIP9.8□□□□□ -0.84
SKA1-201ENST00000285116 POU1F1P28069 291 aa9.8□□□□□ -0.84
SKA1-201ENST00000285116 RECQLP46063 649 aaPredicted RBP9.8□□□□□ -0.84
SKA1-201ENST00000285116 GAS1P54826 345 aa9.8□□□□□ -0.84
SKA1-201ENST00000285116 PCBP4P57723 403 aaKnown RBP9.8□□□□□ -0.84
SKA1-201ENST00000285116 TPBGQ13641 420 aa9.8□□□□□ -0.84
SKA1-201ENST00000285116 HEPACAMQ14CZ8 416 aa9.8□□□□□ -0.84
SKA1-201ENST00000285116 ZNF805Q5CZA5 627 aa9.8□□□□□ -0.84
SKA1-201ENST00000285116 BICRALQ6AI39 1079 aa9.8□□□□□ -0.84
SKA1-201ENST00000285116 C22orf42Q6IC83 251 aa9.8□□□□□ -0.84
SKA1-201ENST00000285116 CD200R1LQ6Q8B3 271 aa9.8□□□□□ -0.84
SKA1-201ENST00000285116 CASP12Q6UXS9 341 aa9.8□□□□□ -0.84
SKA1-201ENST00000285116 ZNF730Q6ZMV8 503 aa9.8□□□□□ -0.84
SKA1-201ENST00000285116 OR8H3Q8N146 312 aa9.8□□□□□ -0.84
SKA1-201ENST00000285116 TMEM145Q8NBT3 493 aa9.8□□□□□ -0.84
SKA1-201ENST00000285116 PLA2G15Q8NCC3 412 aa9.8□□□□□ -0.84
SKA1-201ENST00000285116 NR4A3Q92570 626 aa9.8□□□□□ -0.84
SKA1-201ENST00000285116 CREB3L1Q96BA8 519 aa9.8□□□□□ -0.84
SKA1-201ENST00000285116 MRGPRX3Q96LB0 322 aa9.8□□□□□ -0.84
SKA1-201ENST00000285116 COQ10AQ96MF6 247 aa9.8□□□□□ -0.84
SKA1-201ENST00000285116 TMEM43Q9BTV4 400 aa9.8□□□□□ -0.84
SKA1-201ENST00000285116 PELI2Q9HAT8 420 aa9.8□□□□□ -0.84
SKA1-201ENST00000285116 GALNT9Q9HCQ5 603 aa9.8□□□□□ -0.84
SKA1-201ENST00000285116 SNX11Q9Y5W9 270 aa9.8□□□□□ -0.84
SKA1-201ENST00000285116 HEPACAM2A8MVW5 462 aa9.79□□□□□ -0.84
SKA1-201ENST00000285116 PI15O43692 258 aa9.79□□□□□ -0.84
SKA1-201ENST00000285116 SEMA7AO75326 666 aa9.79□□□□□ -0.84
SKA1-201ENST00000285116 FGF9P31371 208 aaPredicted RBP9.79□□□□□ -0.84
SKA1-201ENST00000285116 CDK5Q00535 292 aa9.79□□□□□ -0.84
SKA1-201ENST00000285116 GANABQ14697 944 aaKnown RBP9.79□□□□□ -0.84
SKA1-201ENST00000285116 ENTPD8Q5MY95 495 aa9.79□□□□□ -0.84
SKA1-201ENST00000285116 CEACAM20Q6UY09 585 aa9.79□□□□□ -0.84
SKA1-201ENST00000285116 LIPIQ6XZB0 460 aa9.79□□□□□ -0.84
SKA1-201ENST00000285116 ZNF514Q96K75 400 aaPredicted RBP9.79□□□□□ -0.84
SKA1-201ENST00000285116 GFM1Q96RP9 751 aaKnown RBP9.79□□□□□ -0.84
SKA1-201ENST00000285116 KCNJ15Q99712 375 aa9.79□□□□□ -0.84
SKA1-201ENST00000285116 KATNB1Q9BVA0 655 aa9.79□□□□□ -0.84
SKA1-201ENST00000285116 TSSK6Q9BXA6 273 aa9.79□□□□□ -0.84
SKA1-201ENST00000285116 CFHR5Q9BXR6 569 aa9.79□□□□□ -0.84
SKA1-201ENST00000285116 PPIL3Q9H2H8 161 aaKnown RBP9.79□□□□□ -0.84
SKA1-201ENST00000285116 KCNN2Q9H2S1 579 aa9.79□□□□□ -0.84
SKA1-201ENST00000285116 LIN7BQ9HAP6 207 aa9.79□□□□□ -0.84
SKA1-201ENST00000285116 FOLH1BQ9HBA9 442 aa9.79□□□□□ -0.84
SKA1-201ENST00000285116 ACSS1Q9NUB1 689 aaPredicted RBP9.79□□□□□ -0.84
SKA1-201ENST00000285116 TAS2R7Q9NYW3 318 aa9.79□□□□□ -0.84
SKA1-201ENST00000285116 MARK1Q9P0L2 795 aa9.79□□□□□ -0.84
SKA1-201ENST00000285116 ADAM29Q9UKF5 820 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms