RNA–Protein interactions for RNA: ENST00000275954.3

TMEM47-201, Transcript of transmembrane protein 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM47, Length 4,054 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47-201ENST00000275954 BORAQ6PGQ7 559 aa13.57□□□□□ -0.24
TMEM47-201ENST00000275954 IGFN1Q86VF2 1251 aa13.57□□□□□ -0.24
TMEM47-201ENST00000275954 ZNF248Q8NDW4 579 aa13.57□□□□□ -0.24
TMEM47-201ENST00000275954 UBTD2Q8WUN7 234 aa13.57□□□□□ -0.24
TMEM47-201ENST00000275954 CCDC115Q96NT0 180 aa13.57□□□□□ -0.24
TMEM47-201ENST00000275954 MMP27Q9H306 513 aa13.57□□□□□ -0.24
TMEM47-201ENST00000275954 ACTL8Q9H568 366 aa13.57□□□□□ -0.24
TMEM47-201ENST00000275954 MVB12BQ9H7P6 319 aa13.57□□□□□ -0.24
TMEM47-201ENST00000275954 DNMT3AQ9Y6K1 912 aaPredicted RBP13.57□□□□□ -0.24
TMEM47-201ENST00000275954 PRAMEF33A0A0G2JMD5 474 aa13.56□□□□□ -0.24
TMEM47-201ENST00000275954 WASHC1A8K0Z3 465 aa13.56□□□□□ -0.24
TMEM47-201ENST00000275954 AKAP8O43823 692 aaKnown RBP13.56□□□□□ -0.24
TMEM47-201ENST00000275954 PRAMEF10O60809 474 aa13.56□□□□□ -0.24
TMEM47-201ENST00000275954 LDB3O75112 727 aa13.56□□□□□ -0.24
TMEM47-201ENST00000275954 ENTPD6O75354 484 aa13.56□□□□□ -0.24
TMEM47-201ENST00000275954 SEMA4FO95754 770 aa13.56□□□□□ -0.24
TMEM47-201ENST00000275954 PHC1P78364 1004 aa13.56□□□□□ -0.24
TMEM47-201ENST00000275954 ZNF791Q3KP31 576 aaPredicted RBP13.56□□□□□ -0.24
TMEM47-201ENST00000275954 PHF19Q5T6S3 580 aa13.56□□□□□ -0.24
TMEM47-201ENST00000275954 SYCE2Q6PIF2 218 aa13.56□□□□□ -0.24
TMEM47-201ENST00000275954 WASH2PQ6VEQ5 465 aa13.56□□□□□ -0.24
TMEM47-201ENST00000275954 PHOSPHO1Q8TCT1 267 aa13.56□□□□□ -0.24
TMEM47-201ENST00000275954 SLC38A5Q8WUX1 472 aa13.56□□□□□ -0.24
TMEM47-201ENST00000275954 TRUB1Q8WWH5 349 aaKnown RBP13.56□□□□□ -0.24
TMEM47-201ENST00000275954 PIK3R3Q92569 461 aa13.56□□□□□ -0.24
TMEM47-201ENST00000275954 MMABQ96EY8 250 aaPredicted RBP13.56□□□□□ -0.24
TMEM47-201ENST00000275954 TREX2Q9BQ50 279 aaPredicted RBP13.56□□□□□ -0.24
TMEM47-201ENST00000275954 ZC4H2Q9NQZ6 224 aa13.56□□□□□ -0.24
TMEM47-201ENST00000275954 HCN3Q9P1Z3 774 aa13.56□□□□□ -0.24
TMEM47-201ENST00000275954 GFYI3L273 518 aa13.56□□□□□ -0.24
TMEM47-201ENST00000275954 DRD2P14416 443 aa13.56□□□□□ -0.24
TMEM47-201ENST00000275954 ENPP2Q13822 863 aa13.56□□□□□ -0.24
TMEM47-201ENST00000275954 NKG7Q16617 165 aa13.56□□□□□ -0.24
TMEM47-201ENST00000275954 FLYWCH1Q4VC44 716 aa13.56□□□□□ -0.24
TMEM47-201ENST00000275954 PYCR3Q53H96 274 aa13.56□□□□□ -0.24
TMEM47-201ENST00000275954 FIGLAQ6QHK4 219 aa13.56□□□□□ -0.24
TMEM47-201ENST00000275954 LCTLQ6UWM7 567 aa13.56□□□□□ -0.24
TMEM47-201ENST00000275954 TMEM179BQ7Z7N9 219 aa13.56□□□□□ -0.24
TMEM47-201ENST00000275954 C16orf58Q96GQ5 468 aa13.56□□□□□ -0.24
TMEM47-201ENST00000275954 APOOQ9BUR5 198 aa13.56□□□□□ -0.24
TMEM47-201ENST00000275954 MKRN2Q9H000 416 aaKnown RBP13.56□□□□□ -0.24
TMEM47-201ENST00000275954 MYNNQ9NPC7 610 aa13.56□□□□□ -0.24
TMEM47-201ENST00000275954 TRPV5Q9NQA5 729 aa13.56□□□□□ -0.24
TMEM47-201ENST00000275954 MKL2Q9ULH7 1088 aa13.56□□□□□ -0.24
TMEM47-201ENST00000275954 CPNE3O75131 537 aaKnown RBP13.56□□□□□ -0.24
TMEM47-201ENST00000275954 GPX2P18283 190 aa13.56□□□□□ -0.24
TMEM47-201ENST00000275954 ACVR2AP27037 513 aa13.56□□□□□ -0.24
TMEM47-201ENST00000275954 RCVRNP35243 200 aa13.56□□□□□ -0.24
TMEM47-201ENST00000275954 PRDX1Q06830 199 aaKnown RBP13.56□□□□□ -0.24
TMEM47-201ENST00000275954 RPA4Q13156 261 aa13.56□□□□□ -0.24
TMEM47-201ENST00000275954 LRRC25Q8N386 305 aaPredicted RBP13.56□□□□□ -0.24
TMEM47-201ENST00000275954 METTL4Q8N3J2 472 aa13.56□□□□□ -0.24
TMEM47-201ENST00000275954 CYB561A3Q8NBI2 242 aa13.56□□□□□ -0.24
TMEM47-201ENST00000275954 BBS10Q8TAM1 723 aa13.56□□□□□ -0.24
TMEM47-201ENST00000275954 SUN3Q8TAQ9 357 aa13.56□□□□□ -0.24
TMEM47-201ENST00000275954 DGAT2Q96PD7 388 aa13.56□□□□□ -0.24
TMEM47-201ENST00000275954 NIPSNAP1Q9BPW8 284 aa13.56□□□□□ -0.24
TMEM47-201ENST00000275954 SPATA9Q9BWV2 254 aa13.56□□□□□ -0.24
TMEM47-201ENST00000275954 RACGAP1Q9H0H5 632 aa13.56□□□□□ -0.24
TMEM47-201ENST00000275954 DSN1Q9H410 356 aa13.56□□□□□ -0.24
TMEM47-201ENST00000275954 BRD7Q9NPI1 651 aa13.56□□□□□ -0.24
TMEM47-201ENST00000275954 NCDNQ9UBB6 729 aa13.56□□□□□ -0.24
TMEM47-201ENST00000275954 DKK3Q9UBP4 350 aa13.56□□□□□ -0.24
TMEM47-201ENST00000275954 GPR34Q9UPC5 381 aa13.56□□□□□ -0.24
TMEM47-201ENST00000275954 CSNK1G3Q9Y6M4 447 aa13.56□□□□□ -0.24
TMEM47-201ENST00000275954 A0A1B0GVT2 93 aa13.55□□□□□ -0.24
TMEM47-201ENST00000275954 ELOA3DA6NLF2 546 aaPredicted RBP13.55□□□□□ -0.24
TMEM47-201ENST00000275954 XKRYO14609 159 aa13.55□□□□□ -0.24
TMEM47-201ENST00000275954 CTSLP07711 333 aa13.55□□□□□ -0.24
TMEM47-201ENST00000275954 FURINP09958 794 aa13.55□□□□□ -0.24
TMEM47-201ENST00000275954 GKN3PP0CG01 181 aa13.55□□□□□ -0.24
TMEM47-201ENST00000275954 ALDH3B2P48448 385 aa13.55□□□□□ -0.24
TMEM47-201ENST00000275954 RAB14P61106 215 aa13.55□□□□□ -0.24
TMEM47-201ENST00000275954 ADARB1P78563 741 aaKnown RBP13.55□□□□□ -0.24
TMEM47-201ENST00000275954 HTRA4P83105 476 aaPredicted RBP13.55□□□□□ -0.24
TMEM47-201ENST00000275954 SLC14A1Q13336 389 aa13.55□□□□□ -0.24
TMEM47-201ENST00000275954 DUSP7Q16829 419 aa13.55□□□□□ -0.24
TMEM47-201ENST00000275954 ELOA3BQ3SY89 546 aa13.55□□□□□ -0.24
TMEM47-201ENST00000275954 B3GLCTQ6Y288 498 aa13.55□□□□□ -0.24
TMEM47-201ENST00000275954 SPATC1Q76KD6 591 aa13.55□□□□□ -0.24
TMEM47-201ENST00000275954 TMEM150AQ86TG1 271 aa13.55□□□□□ -0.24
TMEM47-201ENST00000275954 VN1R2Q8NFZ6 395 aa13.55□□□□□ -0.24
TMEM47-201ENST00000275954 ELOA3Q8NG57 546 aa13.55□□□□□ -0.24
TMEM47-201ENST00000275954 OR56A3Q8NH54 315 aa13.55□□□□□ -0.24
TMEM47-201ENST00000275954 ALG14Q96F25 216 aa13.55□□□□□ -0.24
TMEM47-201ENST00000275954 CDCA3Q99618 268 aaPredicted RBP13.55□□□□□ -0.24
TMEM47-201ENST00000275954 BEX2Q9BXY8 128 aa13.55□□□□□ -0.24
TMEM47-201ENST00000275954 MKKSQ9NPJ1 570 aaPredicted RBP13.55□□□□□ -0.24
TMEM47-201ENST00000275954 ACOT13Q9NPJ3 140 aa13.55□□□□□ -0.24
TMEM47-201ENST00000275954 ENPP5Q9UJA9 477 aa13.55□□□□□ -0.24
TMEM47-201ENST00000275954 TMA7Q9Y2S6 64 aaKnown RBP13.55□□□□□ -0.24
TMEM47-201ENST00000275954 WDR90Q96KV7 1748 aa13.55□□□□□ -0.24
TMEM47-201ENST00000275954 TRBV4-1A0A0J9YWV2 114 aa13.55□□□□□ -0.24
TMEM47-201ENST00000275954 AP1G1O43747 822 aa13.55□□□□□ -0.24
TMEM47-201ENST00000275954 JUNDP17535 347 aa13.55□□□□□ -0.24
TMEM47-201ENST00000275954 GGT2P36268 569 aa13.55□□□□□ -0.24
TMEM47-201ENST00000275954 CXCL12P48061 93 aa13.55□□□□□ -0.24
TMEM47-201ENST00000275954 LCN1P1Q5VSP4 162 aa13.55□□□□□ -0.24
TMEM47-201ENST00000275954 BCDIN3DQ7Z5W3 292 aaKnown RBP13.55□□□□□ -0.24
TMEM47-201ENST00000275954 TMC8Q8IU68 726 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms