RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 ZNF354BQ96LW1 612 aa15.84■□□□□ 0.13
SQLE-201ENST00000265896 TEFMQ96QE5 360 aaKnown RBP15.84■□□□□ 0.13
SQLE-201ENST00000265896 OR2B2Q9GZK3 357 aa15.84■□□□□ 0.13
SQLE-201ENST00000265896 GLIPR2Q9H4G4 154 aa15.84■□□□□ 0.13
SQLE-201ENST00000265896 MOV10Q9HCE1 1003 aaKnown RBP15.84■□□□□ 0.13
SQLE-201ENST00000265896 GIMAP4Q9NUV9 329 aa15.84■□□□□ 0.13
SQLE-201ENST00000265896 PLEKHM1Q9Y4G2 1056 aa15.84■□□□□ 0.13
SQLE-201ENST00000265896 WDFY3Q8IZQ1 3526 aa15.84■□□□□ 0.13
SQLE-201ENST00000265896 CEP290O15078 2479 aa15.84■□□□□ 0.13
SQLE-201ENST00000265896 HEATR5BQ9P2D3 2071 aa15.84■□□□□ 0.13
SQLE-201ENST00000265896 RB1P06400 928 aa15.84■□□□□ 0.13
SQLE-201ENST00000265896 CLCNKAP51800 687 aa15.84■□□□□ 0.13
SQLE-201ENST00000265896 SLC16A1P53985 500 aa15.84■□□□□ 0.13
SQLE-201ENST00000265896 HTRA3P83110 453 aa15.84■□□□□ 0.13
SQLE-201ENST00000265896 CDK10Q15131 360 aa15.84■□□□□ 0.13
SQLE-201ENST00000265896 ZNF57Q68EA5 555 aaPredicted RBP15.84■□□□□ 0.13
SQLE-201ENST00000265896 LRRC56Q8IYG6 542 aaPredicted RBP15.84■□□□□ 0.13
SQLE-201ENST00000265896 Q8N402 240 aa15.84■□□□□ 0.13
SQLE-201ENST00000265896 SLC7A6Q92536 515 aa15.84■□□□□ 0.13
SQLE-201ENST00000265896 NEURL3Q96EH8 262 aa15.84■□□□□ 0.13
SQLE-201ENST00000265896 DPH7Q9BTV6 452 aa15.84■□□□□ 0.13
SQLE-201ENST00000265896 MAN2C1Q9NTJ4 1040 aa15.84■□□□□ 0.13
SQLE-201ENST00000265896 IMP3Q9NV31 184 aaKnown RBP15.84■□□□□ 0.13
SQLE-201ENST00000265896 KCND3Q9UK17 655 aa15.84■□□□□ 0.13
SQLE-201ENST00000265896 CACNA1CQ13936 2221 aa15.84■□□□□ 0.13
SQLE-201ENST00000265896 NOTOA8MTQ0 251 aa15.84■□□□□ 0.13
SQLE-201ENST00000265896 FOXE1O00358 373 aaPredicted RBP15.84■□□□□ 0.13
SQLE-201ENST00000265896 PITPNM1O00562 1244 aa15.84■□□□□ 0.13
SQLE-201ENST00000265896 LILRB5O75023 590 aa15.84■□□□□ 0.13
SQLE-201ENST00000265896 HMGN2P05204 90 aaKnown RBP15.84■□□□□ 0.13
SQLE-201ENST00000265896 SLC2A2P11168 524 aaPredicted RBP15.84■□□□□ 0.13
SQLE-201ENST00000265896 GNSP15586 552 aa15.84■□□□□ 0.13
SQLE-201ENST00000265896 BSGP35613 385 aa15.84■□□□□ 0.13
SQLE-201ENST00000265896 SNRPNP63162 240 aaKnown RBP15.84■□□□□ 0.13
SQLE-201ENST00000265896 GPLD1P80108 840 aa15.84■□□□□ 0.13
SQLE-201ENST00000265896 FNDC3BQ53EP0 1204 aaKnown RBP15.84■□□□□ 0.13
SQLE-201ENST00000265896 NDUFAF5Q5TEU4 345 aa15.84■□□□□ 0.13
SQLE-201ENST00000265896 C18orf63Q68DL7 685 aa15.84■□□□□ 0.13
SQLE-201ENST00000265896 METTL3Q86U44 580 aaKnown RBP15.84■□□□□ 0.13
SQLE-201ENST00000265896 TIFAQ96CG3 184 aa15.84■□□□□ 0.13
SQLE-201ENST00000265896 DTD2Q96FN9 168 aa15.84■□□□□ 0.13
SQLE-201ENST00000265896 KCTD7Q96MP8 289 aa15.84■□□□□ 0.13
SQLE-201ENST00000265896 SLC22A4Q9H015 551 aa15.84■□□□□ 0.13
SQLE-201ENST00000265896 SAP130Q9H0E3 1048 aa15.84■□□□□ 0.13
SQLE-201ENST00000265896 GALNT9Q9HCQ5 603 aa15.84■□□□□ 0.13
SQLE-201ENST00000265896 ITGB1BP2Q9UKP3 347 aa15.84■□□□□ 0.13
SQLE-201ENST00000265896 CLCA2Q9UQC9 943 aa15.84■□□□□ 0.13
SQLE-201ENST00000265896 CACNA1IQ9P0X4 2223 aa15.84■□□□□ 0.13
SQLE-201ENST00000265896 TRBV23OR9-2A0A075B6M9 112 aa15.83■□□□□ 0.12
SQLE-201ENST00000265896 OR52A4PA6NMU1 304 aa15.83■□□□□ 0.12
SQLE-201ENST00000265896 PIP5K1CO60331 668 aa15.83■□□□□ 0.12
SQLE-201ENST00000265896 PLOD3O60568 738 aa15.83■□□□□ 0.12
SQLE-201ENST00000265896 PEPDP12955 493 aa15.83■□□□□ 0.12
SQLE-201ENST00000265896 ETV6P41212 452 aa15.83■□□□□ 0.12
SQLE-201ENST00000265896 KRR1Q13601 381 aaKnown RBP15.83■□□□□ 0.12
SQLE-201ENST00000265896 ZBED6CLQ96FA7 236 aaPredicted RBP15.83■□□□□ 0.12
SQLE-201ENST00000265896 MAGEB10Q96LZ2 347 aaPredicted RBP15.83■□□□□ 0.12
SQLE-201ENST00000265896 FRMD6Q96NE9 622 aa15.83■□□□□ 0.12
SQLE-201ENST00000265896 BBS4Q96RK4 519 aa15.83■□□□□ 0.12
SQLE-201ENST00000265896 MGAT4BQ9UQ53 548 aa15.83■□□□□ 0.12
SQLE-201ENST00000265896 A0A075B6Q4 140 aa15.83■□□□□ 0.12
SQLE-201ENST00000265896 A0A087WUU8 490 aa15.83■□□□□ 0.12
SQLE-201ENST00000265896 ISM1B1AKI9 464 aa15.83■□□□□ 0.12
SQLE-201ENST00000265896 C4orf51C9J302 202 aa15.83■□□□□ 0.12
SQLE-201ENST00000265896 MPZL2O60487 215 aa15.83■□□□□ 0.12
SQLE-201ENST00000265896 RAB36O95755 333 aa15.83■□□□□ 0.12
SQLE-201ENST00000265896 RHOP08100 348 aa15.83■□□□□ 0.12
SQLE-201ENST00000265896 SYPP08247 313 aa15.83■□□□□ 0.12
SQLE-201ENST00000265896 TAS2R41P59536 307 aa15.83■□□□□ 0.12
SQLE-201ENST00000265896 CSTF1Q05048 431 aaKnown RBP15.83■□□□□ 0.12
SQLE-201ENST00000265896 LTB4RQ15722 352 aa15.83■□□□□ 0.12
SQLE-201ENST00000265896 DDI2Q5TDH0 399 aa15.83■□□□□ 0.12
SQLE-201ENST00000265896 C12orf73Q69YU5 71 aa15.83■□□□□ 0.12
SQLE-201ENST00000265896 HSDL2Q6YN16 418 aa15.83■□□□□ 0.12
SQLE-201ENST00000265896 DPPA4Q7L190 304 aa15.83■□□□□ 0.12
SQLE-201ENST00000265896 TIGD4Q8IY51 512 aa15.83■□□□□ 0.12
SQLE-201ENST00000265896 PROKR2Q8NFJ6 384 aa15.83■□□□□ 0.12
SQLE-201ENST00000265896 SLC35G5Q96KT7 338 aa15.83■□□□□ 0.12
SQLE-201ENST00000265896 KCNK6Q9Y257 313 aa15.83■□□□□ 0.12
SQLE-201ENST00000265896 FAM25AB3EWG3 89 aa15.82■□□□□ 0.12
SQLE-201ENST00000265896 FAM25CB3EWG5 89 aa15.82■□□□□ 0.12
SQLE-201ENST00000265896 FAM25GB3EWG6 89 aa15.82■□□□□ 0.12
SQLE-201ENST00000265896 FAAHO00519 579 aa15.82■□□□□ 0.12
SQLE-201ENST00000265896 KIAA0355O15063 1070 aa15.82■□□□□ 0.12
SQLE-201ENST00000265896 FCMRO60667 390 aa15.82■□□□□ 0.12
SQLE-201ENST00000265896 NR2F6P10588 404 aa15.82■□□□□ 0.12
SQLE-201ENST00000265896 PRKCAP17252 672 aa15.82■□□□□ 0.12
SQLE-201ENST00000265896 HTR2BP41595 481 aa15.82■□□□□ 0.12
SQLE-201ENST00000265896 RFX3P48380 749 aa15.82■□□□□ 0.12
SQLE-201ENST00000265896 SOX9P48436 509 aa15.82■□□□□ 0.12
SQLE-201ENST00000265896 GALK2Q01415 458 aa15.82■□□□□ 0.12
SQLE-201ENST00000265896 NCF4Q15080 339 aa15.82■□□□□ 0.12
SQLE-201ENST00000265896 GLYR1Q49A26 553 aaPredicted RBP15.82■□□□□ 0.12
SQLE-201ENST00000265896 TRIQKQ629K1 86 aa15.82■□□□□ 0.12
SQLE-201ENST00000265896 PLET1Q6UQ28 207 aa15.82■□□□□ 0.12
SQLE-201ENST00000265896 ZNF793Q6ZN11 406 aa15.82■□□□□ 0.12
SQLE-201ENST00000265896 NOXA1Q86UR1 476 aa15.82■□□□□ 0.12
SQLE-201ENST00000265896 MARCH9Q86YJ5 346 aa15.82■□□□□ 0.12
SQLE-201ENST00000265896 KLBQ86Z14 1044 aa15.82■□□□□ 0.12
SQLE-201ENST00000265896 NKAIN4Q8IVV8 208 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 109.4 ms