RNA–Protein interactions for RNA: ENST00000263511.8

CROCCP3-201, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CROCCP3, Length 5,368 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-201ENST00000263511 LCTLQ6UWM7 567 aa16.02■□□□□ 0.16
CROCCP3-201ENST00000263511 ARHGAP12Q8IWW6 846 aa16.02■□□□□ 0.16
CROCCP3-201ENST00000263511 CD200R1Q8TD46 325 aa16.02■□□□□ 0.16
CROCCP3-201ENST00000263511 RHBDF1Q96CC6 855 aa16.02■□□□□ 0.16
CROCCP3-201ENST00000263511 VIRMAQ69YN4 1812 aaKnown RBP16.02■□□□□ 0.16
CROCCP3-201ENST00000263511 KIR2DS5A0A0G2JLQ3 304 aa16.02■□□□□ 0.15
CROCCP3-201ENST00000263511 A0A0G2JNG1 304 aa16.02■□□□□ 0.15
CROCCP3-201ENST00000263511 A0A0J9YY10 115 aa16.02■□□□□ 0.15
CROCCP3-201ENST00000263511 KIR2DS3K7RE56 304 aa16.02■□□□□ 0.15
CROCCP3-201ENST00000263511 SMAD6O43541 496 aaKnown RBP16.02■□□□□ 0.15
CROCCP3-201ENST00000263511 DNAJB5O75953 348 aa16.02■□□□□ 0.15
CROCCP3-201ENST00000263511 CST5P28325 142 aaPredicted RBP16.02■□□□□ 0.15
CROCCP3-201ENST00000263511 KIR2DS5Q14953 304 aa16.02■□□□□ 0.15
CROCCP3-201ENST00000263511 SLC22A16Q86VW1 577 aa16.02■□□□□ 0.15
CROCCP3-201ENST00000263511 ZNF420Q8TAQ5 688 aaPredicted RBP16.02■□□□□ 0.15
CROCCP3-201ENST00000263511 LRR1Q96L50 414 aa16.02■□□□□ 0.15
CROCCP3-201ENST00000263511 MS4A4EQ96PG1 132 aa16.02■□□□□ 0.15
CROCCP3-201ENST00000263511 ALOXE3Q9BYJ1 711 aa16.02■□□□□ 0.15
CROCCP3-201ENST00000263511 ATG5Q9H1Y0 275 aa16.02■□□□□ 0.15
CROCCP3-201ENST00000263511 IGSF5Q9NSI5 407 aa16.02■□□□□ 0.15
CROCCP3-201ENST00000263511 TRBV2A0A0J9YWF9 115 aa16.02■□□□□ 0.15
CROCCP3-201ENST00000263511 WASH4PA8MWX3 477 aa16.02■□□□□ 0.15
CROCCP3-201ENST00000263511 GNRHRP30968 328 aa16.02■□□□□ 0.15
CROCCP3-201ENST00000263511 HTR6P50406 440 aa16.02■□□□□ 0.15
CROCCP3-201ENST00000263511 PSMA6P60900 246 aaKnown RBP16.02■□□□□ 0.15
CROCCP3-201ENST00000263511 TMEM130Q8N3G9 435 aa16.02■□□□□ 0.15
CROCCP3-201ENST00000263511 TRMT2BQ96GJ1 504 aaKnown RBP16.02■□□□□ 0.15
CROCCP3-201ENST00000263511 HHIPQ96QV1 700 aa16.02■□□□□ 0.15
CROCCP3-201ENST00000263511 SOBPA7XYQ1 873 aa16.01■□□□□ 0.15
CROCCP3-201ENST00000263511 FOLR3P41439 243 aa16.01■□□□□ 0.15
CROCCP3-201ENST00000263511 MAGEA12P43365 314 aa16.01■□□□□ 0.15
CROCCP3-201ENST00000263511 NR0B1P51843 470 aaKnown RBP16.01■□□□□ 0.15
CROCCP3-201ENST00000263511 PHC1P78364 1004 aa16.01■□□□□ 0.15
CROCCP3-201ENST00000263511 PLEKHN1Q494U1 663 aaPredicted RBP16.01■□□□□ 0.15
CROCCP3-201ENST00000263511 LYSMD4Q5XG99 296 aa16.01■□□□□ 0.15
CROCCP3-201ENST00000263511 TMPRSS12Q86WS5 348 aa16.01■□□□□ 0.15
CROCCP3-201ENST00000263511 CDRT4Q8N9R6 151 aa16.01■□□□□ 0.15
CROCCP3-201ENST00000263511 SMAD9O15198 467 aaKnown RBP16.01■□□□□ 0.15
CROCCP3-201ENST00000263511 ADAP00813 363 aa16.01■□□□□ 0.15
CROCCP3-201ENST00000263511 KDELC1Q6UW63 502 aa16.01■□□□□ 0.15
CROCCP3-201ENST00000263511 DCP2Q8IU60 420 aaKnown RBP16.01■□□□□ 0.15
CROCCP3-201ENST00000263511 TIGD4Q8IY51 512 aa16.01■□□□□ 0.15
CROCCP3-201ENST00000263511 TMIEQ8NEW7 156 aa16.01■□□□□ 0.15
CROCCP3-201ENST00000263511 AKAP1Q92667 903 aaKnown RBP eCLIP16.01■□□□□ 0.15
CROCCP3-201ENST00000263511 RFT1Q96AA3 541 aa16.01■□□□□ 0.15
CROCCP3-201ENST00000263511 APIPQ96GX9 242 aa16.01■□□□□ 0.15
CROCCP3-201ENST00000263511 MS4A4AQ96JQ5 239 aa16.01■□□□□ 0.15
CROCCP3-201ENST00000263511 GGT1P19440 569 aa16.01■□□□□ 0.15
CROCCP3-201ENST00000263511 SLC7A9P82251 487 aa16.01■□□□□ 0.15
CROCCP3-201ENST00000263511 MLC1Q15049 377 aa16.01■□□□□ 0.15
CROCCP3-201ENST00000263511 SIX1Q15475 284 aaPredicted RBP16.01■□□□□ 0.15
CROCCP3-201ENST00000263511 BTBD16Q32M84 506 aa16.01■□□□□ 0.15
CROCCP3-201ENST00000263511 NLGN4XQ8N0W4 816 aa16.01■□□□□ 0.15
CROCCP3-201ENST00000263511 IL17RCQ8NAC3 791 aa16.01■□□□□ 0.15
CROCCP3-201ENST00000263511 KCNS2Q9ULS6 477 aa16.01■□□□□ 0.15
CROCCP3-201ENST00000263511 IRF2P14316 349 aa16.01■□□□□ 0.15
CROCCP3-201ENST00000263511 THBS2P35442 1172 aa16.01■□□□□ 0.15
CROCCP3-201ENST00000263511 CEACAM7Q14002 265 aa16.01■□□□□ 0.15
CROCCP3-201ENST00000263511 DEFB133Q30KQ1 61 aa16.01■□□□□ 0.15
CROCCP3-201ENST00000263511 METTL2BQ6P1Q9 378 aaKnown RBP16.01■□□□□ 0.15
CROCCP3-201ENST00000263511 GPR26Q8NDV2 337 aa16.01■□□□□ 0.15
CROCCP3-201ENST00000263511 DENND6BQ8NEG7 585 aa16.01■□□□□ 0.15
CROCCP3-201ENST00000263511 OR7G3Q8NG95 312 aa16.01■□□□□ 0.15
CROCCP3-201ENST00000263511 OR52E2Q8NGJ4 325 aa16.01■□□□□ 0.15
CROCCP3-201ENST00000263511 LRRC20Q8TCA0 184 aa16.01■□□□□ 0.15
CROCCP3-201ENST00000263511 SLC46A2Q9BY10 475 aa16.01■□□□□ 0.15
CROCCP3-201ENST00000263511 SRPK3Q9UPE1 567 aa16.01■□□□□ 0.15
CROCCP3-201ENST00000263511 J3QRK9 145 aa16■□□□□ 0.15
CROCCP3-201ENST00000263511 M0R129 80 aa16■□□□□ 0.15
CROCCP3-201ENST00000263511 PENKP01210 267 aaPredicted RBP16■□□□□ 0.15
CROCCP3-201ENST00000263511 GTF2F2P13984 249 aa16■□□□□ 0.15
CROCCP3-201ENST00000263511 IST1P53990 364 aa16■□□□□ 0.15
CROCCP3-201ENST00000263511 ZNF829Q3KNS6 432 aaPredicted RBP16■□□□□ 0.15
CROCCP3-201ENST00000263511 RUNDC3AQ59EK9 446 aa16■□□□□ 0.15
CROCCP3-201ENST00000263511 SYCE2Q6PIF2 218 aa16■□□□□ 0.15
CROCCP3-201ENST00000263511 ZNF709Q8N972 641 aa16■□□□□ 0.15
CROCCP3-201ENST00000263511 SNIP1Q8TAD8 396 aaKnown RBP16■□□□□ 0.15
CROCCP3-201ENST00000263511 WDR20Q8TBZ3 569 aa16■□□□□ 0.15
CROCCP3-201ENST00000263511 TOE1Q96GM8 510 aaKnown RBP16■□□□□ 0.15
CROCCP3-201ENST00000263511 A0A1W2PPW3 197 aa16■□□□□ 0.15
CROCCP3-201ENST00000263511 OR52A4PA6NMU1 304 aa16■□□□□ 0.15
CROCCP3-201ENST00000263511 BRINP1O60477 761 aa16■□□□□ 0.15
CROCCP3-201ENST00000263511 ZNF43P17038 809 aa16■□□□□ 0.15
CROCCP3-201ENST00000263511 TMEM69Q5SWH9 247 aa16■□□□□ 0.15
CROCCP3-201ENST00000263511 C6orf183Q5T699 404 aa16■□□□□ 0.15
CROCCP3-201ENST00000263511 UEVLDQ8IX04 471 aa16■□□□□ 0.15
CROCCP3-201ENST00000263511 SPAG16Q8N0X2 631 aa16■□□□□ 0.15
CROCCP3-201ENST00000263511 OR13C3Q8NGS6 347 aa16■□□□□ 0.15
CROCCP3-201ENST00000263511 NANOS1Q8WY41 292 aaKnown RBP16■□□□□ 0.15
CROCCP3-201ENST00000263511 BAZ2AQ9UIF9 1905 aaKnown RBP16■□□□□ 0.15
CROCCP3-201ENST00000263511 FGL2Q14314 439 aa16■□□□□ 0.15
CROCCP3-201ENST00000263511 SLC18B1Q6NT16 456 aa16■□□□□ 0.15
CROCCP3-201ENST00000263511 HMBOX1Q6NT76 420 aa16■□□□□ 0.15
CROCCP3-201ENST00000263511 HSD11B1LQ7Z5J1 315 aa16■□□□□ 0.15
CROCCP3-201ENST00000263511 OR4K5Q8NGD3 323 aa16■□□□□ 0.15
CROCCP3-201ENST00000263511 DTD2Q96FN9 168 aa16■□□□□ 0.15
CROCCP3-201ENST00000263511 CERS1P27544 350 aa16■□□□□ 0.15
CROCCP3-201ENST00000263511 ZNF45Q02386 682 aa16■□□□□ 0.15
CROCCP3-201ENST00000263511 CREB3L1Q96BA8 519 aa16■□□□□ 0.15
CROCCP3-201ENST00000263511 CLSTN3Q9BQT9 956 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms