RNA–Protein interactions for RNA: ENST00000263202.14

UFD1-201, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFD1, Length 1,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-201ENST00000263202 FAM198BQ6UWH4 519 aa21.15■□□□□ 0.98
UFD1-201ENST00000263202 WDR53Q7Z5U6 358 aaPredicted RBP21.15■□□□□ 0.98
UFD1-201ENST00000263202 WDR54Q9H977 334 aa21.15■□□□□ 0.98
UFD1-201ENST00000263202 RNPEPL1Q9HAU8 725 aa21.15■□□□□ 0.98
UFD1-201ENST00000263202 DCAF13Q9NV06 445 aaKnown RBP21.15■□□□□ 0.98
UFD1-201ENST00000263202 ERVK-19Q9WJR5 959 aa21.15■□□□□ 0.98
UFD1-201ENST00000263202 PTPRBP23467 1997 aa21.14■□□□□ 0.98
UFD1-201ENST00000263202 PRAMEF27A3QJZ7 478 aa21.14■□□□□ 0.97
UFD1-201ENST00000263202 H3BNX3 289 aa21.14■□□□□ 0.97
UFD1-201ENST00000263202 GCM2O75603 506 aaPredicted RBP21.14■□□□□ 0.97
UFD1-201ENST00000263202 BCHEP06276 602 aa21.14■□□□□ 0.97
UFD1-201ENST00000263202 ELAVL1Q15717 326 aaKnown RBP21.14■□□□□ 0.97
UFD1-201ENST00000263202 ZFP1Q6P2D0 407 aa21.14■□□□□ 0.97
UFD1-201ENST00000263202 LANCL3Q6ZV70 420 aa21.14■□□□□ 0.97
UFD1-201ENST00000263202 SLC16A11Q8NCK7 471 aa21.14■□□□□ 0.97
UFD1-201ENST00000263202 CANT1Q8WVQ1 401 aa21.14■□□□□ 0.97
UFD1-201ENST00000263202 SLCO4A1Q96BD0 722 aa21.14■□□□□ 0.97
UFD1-201ENST00000263202 CNPPD1Q9BV87 410 aa21.14■□□□□ 0.97
UFD1-201ENST00000263202 SPRY4Q9C004 299 aa21.14■□□□□ 0.97
UFD1-201ENST00000263202 P2RX2Q9UBL9 471 aa21.14■□□□□ 0.97
UFD1-201ENST00000263202 NKX1-2Q9UD57 310 aaPredicted RBP21.14■□□□□ 0.97
UFD1-201ENST00000263202 GPN3Q9UHW5 284 aaPredicted RBP21.14■□□□□ 0.97
UFD1-201ENST00000263202 PCDHGA8Q9Y5G5 932 aa21.14■□□□□ 0.97
UFD1-201ENST00000263202 KCNE3Q9Y6H6 103 aa21.14■□□□□ 0.97
UFD1-201ENST00000263202 SYNDIG1LA6NDD5 238 aa21.13■□□□□ 0.97
UFD1-201ENST00000263202 A8MUA0 341 aa21.13■□□□□ 0.97
UFD1-201ENST00000263202 COQ9O75208 318 aa21.13■□□□□ 0.97
UFD1-201ENST00000263202 DLGAP3O95886 979 aa21.13■□□□□ 0.97
UFD1-201ENST00000263202 SERPINA1P01009 418 aa21.13■□□□□ 0.97
UFD1-201ENST00000263202 AP2B1P63010 937 aa21.13■□□□□ 0.97
UFD1-201ENST00000263202 FAAH2Q6GMR7 532 aa21.13■□□□□ 0.97
UFD1-201ENST00000263202 ZCCHC12Q6PEW1 402 aa21.13■□□□□ 0.97
UFD1-201ENST00000263202 GALNT10Q86SR1 603 aa21.13■□□□□ 0.97
UFD1-201ENST00000263202 SLC30A8Q8IWU4 369 aa21.13■□□□□ 0.97
UFD1-201ENST00000263202 ADGRG5Q8IZF4 528 aa21.13■□□□□ 0.97
UFD1-201ENST00000263202 ADAMTS15Q8TE58 950 aa21.13■□□□□ 0.97
UFD1-201ENST00000263202 SLC35A4Q96G79 324 aa21.13■□□□□ 0.97
UFD1-201ENST00000263202 DHRS12A0PJE2 317 aa21.13■□□□□ 0.97
UFD1-201ENST00000263202 ACP2P11117 423 aa21.13■□□□□ 0.97
UFD1-201ENST00000263202 AQP1P29972 269 aa21.13■□□□□ 0.97
UFD1-201ENST00000263202 EMDP50402 254 aa21.13■□□□□ 0.97
UFD1-201ENST00000263202 NOVA1P51513 510 aaKnown RBP21.13■□□□□ 0.97
UFD1-201ENST00000263202 EMP2P54851 167 aa21.13■□□□□ 0.97
UFD1-201ENST00000263202 SYPL1Q16563 259 aa21.13■□□□□ 0.97
UFD1-201ENST00000263202 LRRC23Q53EV4 343 aaPredicted RBP21.13■□□□□ 0.97
UFD1-201ENST00000263202 INTS11Q5TA45 600 aaKnown RBP21.13■□□□□ 0.97
UFD1-201ENST00000263202 REEP3Q6NUK4 255 aa21.13■□□□□ 0.97
UFD1-201ENST00000263202 CCDC80Q76M96 950 aa21.13■□□□□ 0.97
UFD1-201ENST00000263202 TMPRSS12Q86WS5 348 aa21.13■□□□□ 0.97
UFD1-201ENST00000263202 SLC44A2Q8IWA5 706 aaPredicted RBP21.13■□□□□ 0.97
UFD1-201ENST00000263202 ENDOVQ8N8Q3 282 aaKnown RBP21.13■□□□□ 0.97
UFD1-201ENST00000263202 CDRT4Q8N9R6 151 aa21.13■□□□□ 0.97
UFD1-201ENST00000263202 SLC9A6Q92581 669 aa21.13■□□□□ 0.97
UFD1-201ENST00000263202 TMEM19Q96HH6 336 aa21.13■□□□□ 0.97
UFD1-201ENST00000263202 OLAHQ9NV23 265 aa21.13■□□□□ 0.97
UFD1-201ENST00000263202 ANGPT4Q9Y264 503 aa21.13■□□□□ 0.97
UFD1-201ENST00000263202 SDK2Q58EX2 2172 aa21.12■□□□□ 0.97
UFD1-201ENST00000263202 DUXAA6NLW8 204 aa21.12■□□□□ 0.97
UFD1-201ENST00000263202 C9J4A7 227 aa21.12■□□□□ 0.97
UFD1-201ENST00000263202 ALOX12BO75342 701 aa21.12■□□□□ 0.97
UFD1-201ENST00000263202 CLPSP04118 112 aa21.12■□□□□ 0.97
UFD1-201ENST00000263202 GPIP06744 558 aa21.12■□□□□ 0.97
UFD1-201ENST00000263202 UMPSP11172 480 aa21.12■□□□□ 0.97
UFD1-201ENST00000263202 SLC7A1P30825 629 aa21.12■□□□□ 0.97
UFD1-201ENST00000263202 SLC5A2P31639 672 aa21.12■□□□□ 0.97
UFD1-201ENST00000263202 MAP3K8P41279 467 aa21.12■□□□□ 0.97
UFD1-201ENST00000263202 CRYBA2P53672 197 aa21.12■□□□□ 0.97
UFD1-201ENST00000263202 PCBP3P57721 371 aaKnown RBP21.12■□□□□ 0.97
UFD1-201ENST00000263202 FUT5Q11128 374 aa21.12■□□□□ 0.97
UFD1-201ENST00000263202 TMEM164Q5U3C3 297 aa21.12■□□□□ 0.97
UFD1-201ENST00000263202 METTL25Q8N6Q8 603 aa21.12■□□□□ 0.97
UFD1-201ENST00000263202 HOXB13Q92826 284 aaPredicted RBP21.12■□□□□ 0.97
UFD1-201ENST00000263202 SENP5Q96HI0 755 aaPredicted RBP21.12■□□□□ 0.97
UFD1-201ENST00000263202 FBXL20Q96IG2 436 aa21.12■□□□□ 0.97
UFD1-201ENST00000263202 CCM2LQ9NUG4 571 aaPredicted RBP21.12■□□□□ 0.97
UFD1-201ENST00000263202 FOXJ2Q9P0K8 574 aa21.12■□□□□ 0.97
UFD1-201ENST00000263202 C3orf18Q9UK00 162 aa21.12■□□□□ 0.97
UFD1-201ENST00000263202 NXT1Q9UKK6 140 aaKnown RBP21.12■□□□□ 0.97
UFD1-201ENST00000263202 CLCA3PQ9Y6N3 262 aa21.12■□□□□ 0.97
UFD1-201ENST00000263202 RIF1Q5UIP0 2472 aaKnown RBP21.12■□□□□ 0.97
UFD1-201ENST00000263202 TMEM247A6NEH6 219 aa21.11■□□□□ 0.97
UFD1-201ENST00000263202 SLC30A4O14863 429 aa21.11■□□□□ 0.97
UFD1-201ENST00000263202 PRAMEF2O60811 474 aa21.11■□□□□ 0.97
UFD1-201ENST00000263202 PSMA4P25789 261 aaKnown RBP21.11■□□□□ 0.97
UFD1-201ENST00000263202 DUSP5Q16690 384 aa21.11■□□□□ 0.97
UFD1-201ENST00000263202 C6orf15Q6UXA7 325 aaPredicted RBP21.11■□□□□ 0.97
UFD1-201ENST00000263202 TIPARPQ7Z3E1 657 aaKnown RBP21.11■□□□□ 0.97
UFD1-201ENST00000263202 ANKRD37Q7Z713 158 aa21.11■□□□□ 0.97
UFD1-201ENST00000263202 FAM86B1Q8N7N1 296 aa21.11■□□□□ 0.97
UFD1-201ENST00000263202 ZNF615Q8N8J6 731 aa21.11■□□□□ 0.97
UFD1-201ENST00000263202 FAM110BQ8TC76 370 aa21.11■□□□□ 0.97
UFD1-201ENST00000263202 CRB3Q9BUF7 120 aa21.11■□□□□ 0.97
UFD1-201ENST00000263202 OR10A5Q9H207 317 aa21.11■□□□□ 0.97
UFD1-201ENST00000263202 PIGUQ9H490 435 aa21.11■□□□□ 0.97
UFD1-201ENST00000263202 STX18Q9P2W9 335 aaKnown RBP21.11■□□□□ 0.97
UFD1-201ENST00000263202 ANAPC2Q9UJX6 822 aa21.11■□□□□ 0.97
UFD1-201ENST00000263202 HEMK1Q9Y5R4 338 aaPredicted RBP21.11■□□□□ 0.97
UFD1-201ENST00000263202 V9GYQ6 96 aa21.11■□□□□ 0.97
UFD1-201ENST00000263202 FAM149AA5PLN7 773 aa21.11■□□□□ 0.97
UFD1-201ENST00000263202 C5orf58C9J3I9 102 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms