RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 ZNF319Q9P2F9 582 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 LYVE1Q9Y5Y7 322 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 FADS1O60427 444 aa5.18□□□□□ -1.58
TOPBP1-201ENST00000260810 PTP4A3O75365 173 aa5.18□□□□□ -1.58
TOPBP1-201ENST00000260810 WDR47O94967 919 aa5.18□□□□□ -1.58
TOPBP1-201ENST00000260810 EIF2S1P05198 315 aaKnown RBP5.18□□□□□ -1.58
TOPBP1-201ENST00000260810 CKMT1AP12532 417 aa5.18□□□□□ -1.58
TOPBP1-201ENST00000260810 OR1E2P47887 323 aa5.18□□□□□ -1.58
TOPBP1-201ENST00000260810 TMEM205Q6UW68 189 aa5.18□□□□□ -1.58
TOPBP1-201ENST00000260810 USP45Q70EL2 814 aa5.18□□□□□ -1.58
TOPBP1-201ENST00000260810 PARP9Q8IXQ6 854 aa5.18□□□□□ -1.58
TOPBP1-201ENST00000260810 CDRT15Q96T59 188 aa5.18□□□□□ -1.58
TOPBP1-201ENST00000260810 AMELYQ99218 206 aa5.18□□□□□ -1.58
TOPBP1-201ENST00000260810 BARHL1Q9BZE3 327 aa5.18□□□□□ -1.58
TOPBP1-201ENST00000260810 WDR26Q9H7D7 661 aa5.18□□□□□ -1.58
TOPBP1-201ENST00000260810 NT5DC2Q9H857 520 aa5.18□□□□□ -1.58
TOPBP1-201ENST00000260810 S100A14Q9HCY8 104 aa5.18□□□□□ -1.58
TOPBP1-201ENST00000260810 AHSPQ9NZD4 102 aa5.18□□□□□ -1.58
TOPBP1-201ENST00000260810 BLOC1S6Q9UL45 172 aa5.18□□□□□ -1.58
TOPBP1-201ENST00000260810 DOLKQ9UPQ8 538 aa5.18□□□□□ -1.58
TOPBP1-201ENST00000260810 NPIPA5A0A0B4J1W7 369 aa5.18□□□□□ -1.58
TOPBP1-201ENST00000260810 UBA6A0AVT1 1052 aaPredicted RBP5.18□□□□□ -1.58
TOPBP1-201ENST00000260810 EIF4E1BA6NMX2 242 aaKnown RBP5.18□□□□□ -1.58
TOPBP1-201ENST00000260810 NPIPA7E9PJI5 369 aa5.18□□□□□ -1.58
TOPBP1-201ENST00000260810 SLC2A10O95528 541 aa5.18□□□□□ -1.58
TOPBP1-201ENST00000260810 NPIPA8P0DM63 369 aa5.18□□□□□ -1.58
TOPBP1-201ENST00000260810 HLA-DOBP13765 273 aa5.18□□□□□ -1.58
TOPBP1-201ENST00000260810 UQCRBP14927 111 aa5.18□□□□□ -1.58
TOPBP1-201ENST00000260810 ACP1P24666 158 aa5.18□□□□□ -1.58
TOPBP1-201ENST00000260810 SERPINB10P48595 397 aa5.18□□□□□ -1.58
TOPBP1-201ENST00000260810 KRR1Q13601 381 aaKnown RBP5.18□□□□□ -1.58
TOPBP1-201ENST00000260810 STARD3Q14849 445 aa5.18□□□□□ -1.58
TOPBP1-201ENST00000260810 MEP1AQ16819 746 aa5.18□□□□□ -1.58
TOPBP1-201ENST00000260810 LINC01590Q5TEZ4 76 aa5.18□□□□□ -1.58
TOPBP1-201ENST00000260810 LIPJQ5W064 366 aa5.18□□□□□ -1.58
TOPBP1-201ENST00000260810 UNC5DQ6UXZ4 953 aa5.18□□□□□ -1.58
TOPBP1-201ENST00000260810 TMEM64Q6YI46 380 aa5.18□□□□□ -1.58
TOPBP1-201ENST00000260810 ADGRE4PQ86SQ3 457 aa5.18□□□□□ -1.58
TOPBP1-201ENST00000260810 CEP76Q8TAP6 659 aa5.18□□□□□ -1.58
TOPBP1-201ENST00000260810 PNPT1Q8TCS8 783 aaKnown RBP5.18□□□□□ -1.58
TOPBP1-201ENST00000260810 NCSTNQ92542 709 aa5.18□□□□□ -1.58
TOPBP1-201ENST00000260810 NECTIN4Q96NY8 510 aa5.18□□□□□ -1.58
TOPBP1-201ENST00000260810 CGREF1Q99674 301 aa5.18□□□□□ -1.58
TOPBP1-201ENST00000260810 HES7Q9BYE0 225 aa5.18□□□□□ -1.58
TOPBP1-201ENST00000260810 PIF1Q9H611 641 aa5.18□□□□□ -1.58
TOPBP1-201ENST00000260810 SARS2Q9NP81 518 aaKnown RBP5.18□□□□□ -1.58
TOPBP1-201ENST00000260810 NDRG4Q9ULP0 352 aaKnown RBP5.18□□□□□ -1.58
TOPBP1-201ENST00000260810 EPPK1P58107 5090 aaKnown RBP5.18□□□□□ -1.58
TOPBP1-201ENST00000260810 A0A1B0GVG6 124 aa5.18□□□□□ -1.58
TOPBP1-201ENST00000260810 PRR23AA6NEV1 266 aa5.18□□□□□ -1.58
TOPBP1-201ENST00000260810 ADH1BP00325 375 aa5.18□□□□□ -1.58
TOPBP1-201ENST00000260810 CELA3AP09093 270 aa5.18□□□□□ -1.58
TOPBP1-201ENST00000260810 SPINK2P20155 84 aa5.18□□□□□ -1.58
TOPBP1-201ENST00000260810 MAKP20794 623 aa5.18□□□□□ -1.58
TOPBP1-201ENST00000260810 PTNP21246 168 aa5.18□□□□□ -1.58
TOPBP1-201ENST00000260810 RPL3P39023 403 aaKnown RBP5.18□□□□□ -1.58
TOPBP1-201ENST00000260810 TAS2R50P59544 299 aa5.18□□□□□ -1.58
TOPBP1-201ENST00000260810 STX5Q13190 355 aa5.18□□□□□ -1.58
TOPBP1-201ENST00000260810 ACOX1Q15067 660 aa5.18□□□□□ -1.58
TOPBP1-201ENST00000260810 IGFBP7Q16270 282 aa5.18□□□□□ -1.58
TOPBP1-201ENST00000260810 CTF1Q16619 201 aa5.18□□□□□ -1.58
TOPBP1-201ENST00000260810 ZNF528Q3MIS6 628 aa5.18□□□□□ -1.58
TOPBP1-201ENST00000260810 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.18□□□□□ -1.58
TOPBP1-201ENST00000260810 NDUFAF5Q5TEU4 345 aa5.18□□□□□ -1.58
TOPBP1-201ENST00000260810 RAET1GQ6H3X3 334 aa5.18□□□□□ -1.58
TOPBP1-201ENST00000260810 FBXO39Q8N4B4 442 aa5.18□□□□□ -1.58
TOPBP1-201ENST00000260810 ELMO1Q92556 727 aa5.18□□□□□ -1.58
TOPBP1-201ENST00000260810 HCN3Q9P1Z3 774 aa5.18□□□□□ -1.58
TOPBP1-201ENST00000260810 CFAP73A6NFT4 308 aa5.18□□□□□ -1.58
TOPBP1-201ENST00000260810 SLC9B1P1A6NJY1 282 aa5.18□□□□□ -1.58
TOPBP1-201ENST00000260810 SGK494L7N484 410 aa5.18□□□□□ -1.58
TOPBP1-201ENST00000260810 RHOBTB1O94844 696 aa5.18□□□□□ -1.58
TOPBP1-201ENST00000260810 TOXO94900 526 aa5.18□□□□□ -1.58
TOPBP1-201ENST00000260810 HPRP00739 348 aa5.18□□□□□ -1.58
TOPBP1-201ENST00000260810 NOS3P29474 1203 aa5.18□□□□□ -1.58
TOPBP1-201ENST00000260810 PBLDP30039 288 aaPredicted RBP5.18□□□□□ -1.58
TOPBP1-201ENST00000260810 PLIN5Q00G26 463 aa5.18□□□□□ -1.58
TOPBP1-201ENST00000260810 ENPP7Q6UWV6 458 aa5.18□□□□□ -1.58
TOPBP1-201ENST00000260810 GPRIN3Q6ZVF9 776 aa5.18□□□□□ -1.58
TOPBP1-201ENST00000260810 LDLRAD3Q86YD5 345 aa5.18□□□□□ -1.58
TOPBP1-201ENST00000260810 PGAM4Q8N0Y7 254 aa5.18□□□□□ -1.58
TOPBP1-201ENST00000260810 DOK1Q99704 481 aa5.18□□□□□ -1.58
TOPBP1-201ENST00000260810 SH3GL1Q99961 368 aa5.18□□□□□ -1.58
TOPBP1-201ENST00000260810 VN1R1Q9GZP7 353 aa5.18□□□□□ -1.58
TOPBP1-201ENST00000260810 TRIT1Q9H3H1 467 aaKnown RBP5.18□□□□□ -1.58
TOPBP1-201ENST00000260810 DSN1Q9H410 356 aa5.18□□□□□ -1.58
TOPBP1-201ENST00000260810 MYNNQ9NPC7 610 aa5.18□□□□□ -1.58
TOPBP1-201ENST00000260810 ZNF282Q9UDV7 671 aaPredicted RBP5.18□□□□□ -1.58
TOPBP1-201ENST00000260810 MCM8Q9UJA3 840 aa5.18□□□□□ -1.58
TOPBP1-201ENST00000260810 RAB23Q9ULC3 237 aa5.18□□□□□ -1.58
TOPBP1-201ENST00000260810 TRPC5OSA6NMA1 111 aa5.17□□□□□ -1.58
TOPBP1-201ENST00000260810 C2orf81A6NN90 581 aa5.17□□□□□ -1.58
TOPBP1-201ENST00000260810 SYCE1LA8MT33 242 aa5.17□□□□□ -1.58
TOPBP1-201ENST00000260810 HSPA4LO95757 839 aa5.17□□□□□ -1.58
TOPBP1-201ENST00000260810 C8orf89P0DMQ9 161 aa5.17□□□□□ -1.58
TOPBP1-201ENST00000260810 CLUP10909 449 aa5.17□□□□□ -1.58
TOPBP1-201ENST00000260810 TIA1P31483 386 aaKnown RBP eCLIP5.17□□□□□ -1.581e-6■■■■□ 21.9
TOPBP1-201ENST00000260810 GRK3P35626 688 aa5.17□□□□□ -1.58
TOPBP1-201ENST00000260810 GNA13Q14344 377 aa5.17□□□□□ -1.58
TOPBP1-201ENST00000260810 ATP6AP1Q15904 470 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms