RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 RCN3Q96D15 328 aa15.58■□□□□ 0.08
SDCBP-201ENST00000260130 ART5Q96L15 291 aa15.58■□□□□ 0.08
SDCBP-201ENST00000260130 MYNNQ9NPC7 610 aa15.58■□□□□ 0.08
SDCBP-201ENST00000260130 MRGBPQ9NV56 204 aa15.58■□□□□ 0.08
SDCBP-201ENST00000260130 EHD3Q9NZN3 535 aa15.58■□□□□ 0.08
SDCBP-201ENST00000260130 COPS7AQ9UBW8 275 aa15.58■□□□□ 0.08
SDCBP-201ENST00000260130 C15orf38-AP3S2A0A0A6YYH1 394 aa15.58■□□□□ 0.08
SDCBP-201ENST00000260130 MAN1A2O60476 641 aa15.58■□□□□ 0.08
SDCBP-201ENST00000260130 CSNK2A2P19784 350 aaPredicted RBP15.58■□□□□ 0.08
SDCBP-201ENST00000260130 FEN1P39748 380 aaKnown RBP15.58■□□□□ 0.08
SDCBP-201ENST00000260130 PLEKHN1Q494U1 663 aaPredicted RBP15.58■□□□□ 0.08
SDCBP-201ENST00000260130 ATP6AP1LQ52LC2 224 aa15.58■□□□□ 0.08
SDCBP-201ENST00000260130 NXNQ6DKJ4 435 aa15.58■□□□□ 0.08
SDCBP-201ENST00000260130 FAM71E1Q6IPT2 247 aa15.58■□□□□ 0.08
SDCBP-201ENST00000260130 HSDL2Q6YN16 418 aa15.58■□□□□ 0.08
SDCBP-201ENST00000260130 ARPINQ7Z6K5 226 aa15.58■□□□□ 0.08
SDCBP-201ENST00000260130 BEST3Q8N1M1 668 aa15.58■□□□□ 0.08
SDCBP-201ENST00000260130 ARMC10Q8N2F6 343 aa15.58■□□□□ 0.08
SDCBP-201ENST00000260130 ADCY4Q8NFM4 1077 aa15.58■□□□□ 0.08
SDCBP-201ENST00000260130 THAP3Q8WTV1 239 aaPredicted RBP15.58■□□□□ 0.08
SDCBP-201ENST00000260130 C19orf60Q96EN9 201 aa15.58■□□□□ 0.08
SDCBP-201ENST00000260130 FBXL20Q96IG2 436 aa15.58■□□□□ 0.08
SDCBP-201ENST00000260130 PPP1R36Q96LQ0 422 aa15.58■□□□□ 0.08
SDCBP-201ENST00000260130 CXorf21Q9HAI6 301 aa15.58■□□□□ 0.08
SDCBP-201ENST00000260130 ABI3Q9P2A4 366 aa15.58■□□□□ 0.08
SDCBP-201ENST00000260130 SPENQ96T58 3664 aaKnown RBP15.57■□□□□ 0.08
SDCBP-201ENST00000260130 TRPC5OSA6NMA1 111 aa15.57■□□□□ 0.08
SDCBP-201ENST00000260130 HRKO00198 91 aa15.57■□□□□ 0.08
SDCBP-201ENST00000260130 IGKV3-11P04433 115 aa15.57■□□□□ 0.08
SDCBP-201ENST00000260130 DDCP20711 480 aa15.57■□□□□ 0.08
SDCBP-201ENST00000260130 ME2P23368 584 aa15.57■□□□□ 0.08
SDCBP-201ENST00000260130 TACR1P25103 407 aa15.57■□□□□ 0.08
SDCBP-201ENST00000260130 CASRP41180 1078 aa15.57■□□□□ 0.08
SDCBP-201ENST00000260130 MLF1P58340 268 aa15.57■□□□□ 0.08
SDCBP-201ENST00000260130 ZNF267Q14586 743 aaPredicted RBP15.57■□□□□ 0.08
SDCBP-201ENST00000260130 PDCD2Q16342 344 aaPredicted RBP15.57■□□□□ 0.08
SDCBP-201ENST00000260130 FAM180BQ6P0A1 224 aa15.57■□□□□ 0.08
SDCBP-201ENST00000260130 IKBIPQ70UQ0 350 aa15.57■□□□□ 0.08
SDCBP-201ENST00000260130 DOK4Q8TEW6 326 aa15.57■□□□□ 0.08
SDCBP-201ENST00000260130 CNRIP1Q96F85 164 aaPredicted RBP15.57■□□□□ 0.08
SDCBP-201ENST00000260130 EGLN2Q96KS0 407 aa15.57■□□□□ 0.08
SDCBP-201ENST00000260130 ZNF681Q96N22 645 aa15.57■□□□□ 0.08
SDCBP-201ENST00000260130 CNPPD1Q9BV87 410 aa15.57■□□□□ 0.08
SDCBP-201ENST00000260130 GIMAP2Q9UG22 337 aa15.57■□□□□ 0.08
SDCBP-201ENST00000260130 PRKNO60260 465 aaPredicted RBP15.56■□□□□ 0.08
SDCBP-201ENST00000260130 F10P00742 488 aa15.56■□□□□ 0.08
SDCBP-201ENST00000260130 JUNP05412 331 aaKnown RBP15.56■□□□□ 0.08
SDCBP-201ENST00000260130 NT5EP21589 574 aa15.56■□□□□ 0.08
SDCBP-201ENST00000260130 HSPA13P48723 471 aa15.56■□□□□ 0.08
SDCBP-201ENST00000260130 ERVK-8P63133 956 aa15.56■□□□□ 0.08
SDCBP-201ENST00000260130 TLR1Q15399 786 aa15.56■□□□□ 0.08
SDCBP-201ENST00000260130 C6orf136Q5SQH8 315 aa15.56■□□□□ 0.08
SDCBP-201ENST00000260130 PRICKLE2Q7Z3G6 844 aa15.56■□□□□ 0.08
SDCBP-201ENST00000260130 GALNT12Q8IXK2 581 aa15.56■□□□□ 0.08
SDCBP-201ENST00000260130 SAMD14Q8IZD0 417 aaPredicted RBP15.56■□□□□ 0.08
SDCBP-201ENST00000260130 OR8K3Q8NH51 312 aa15.56■□□□□ 0.08
SDCBP-201ENST00000260130 EXOSC8Q96B26 276 aaKnown RBP15.56■□□□□ 0.08
SDCBP-201ENST00000260130 TUBGCP3Q96CW5 907 aa15.56■□□□□ 0.08
SDCBP-201ENST00000260130 SLAMF7Q9NQ25 335 aa15.56■□□□□ 0.08
SDCBP-201ENST00000260130 MIEF1Q9NQG6 463 aa15.56■□□□□ 0.08
SDCBP-201ENST00000260130 ERVK-19Q9WJR5 959 aa15.56■□□□□ 0.08
SDCBP-201ENST00000260130 OR5H15A6NDH6 313 aa15.56■□□□□ 0.08
SDCBP-201ENST00000260130 ATP1B1P05026 303 aa15.56■□□□□ 0.08
SDCBP-201ENST00000260130 SDC1P18827 310 aa15.56■□□□□ 0.08
SDCBP-201ENST00000260130 TNFSF10P50591 281 aa15.56■□□□□ 0.08
SDCBP-201ENST00000260130 RNF4P78317 190 aa15.56■□□□□ 0.08
SDCBP-201ENST00000260130 MRPS22P82650 360 aaKnown RBP15.56■□□□□ 0.08
SDCBP-201ENST00000260130 ZNF605Q86T29 641 aa15.56■□□□□ 0.08
SDCBP-201ENST00000260130 LRRC25Q8N386 305 aaPredicted RBP15.56■□□□□ 0.08
SDCBP-201ENST00000260130 Q8NA96 180 aa15.56■□□□□ 0.08
SDCBP-201ENST00000260130 SLC35C2Q9NQQ7 365 aa15.56■□□□□ 0.08
SDCBP-201ENST00000260130 LUZP4Q9P127 313 aa15.56■□□□□ 0.08
SDCBP-201ENST00000260130 EXO1Q9UQ84 846 aaKnown RBP15.56■□□□□ 0.08
SDCBP-201ENST00000260130 GABRR3A8MPY1 467 aa15.55■□□□□ 0.08
SDCBP-201ENST00000260130 CDK2AP1O14519 115 aa15.55■□□□□ 0.08
SDCBP-201ENST00000260130 CFLARO15519 480 aa15.55■□□□□ 0.08
SDCBP-201ENST00000260130 BCAS2O75934 225 aaPredicted RBP15.55■□□□□ 0.08
SDCBP-201ENST00000260130 BCKDHAP12694 445 aa15.55■□□□□ 0.08
SDCBP-201ENST00000260130 MAPK1P28482 360 aa15.55■□□□□ 0.08
SDCBP-201ENST00000260130 TICAM1Q8IUC6 712 aa15.55■□□□□ 0.08
SDCBP-201ENST00000260130 OR5L2Q8NGL0 311 aa15.55■□□□□ 0.08
SDCBP-201ENST00000260130 TSSK3Q96PN8 268 aa15.55■□□□□ 0.08
SDCBP-201ENST00000260130 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.55■□□□□ 0.08
SDCBP-201ENST00000260130 GIMAP4Q9NUV9 329 aa15.55■□□□□ 0.08
SDCBP-201ENST00000260130 TAS2R7Q9NYW3 318 aa15.55■□□□□ 0.08
SDCBP-201ENST00000260130 MYOTQ9UBF9 498 aa15.55■□□□□ 0.08
SDCBP-201ENST00000260130 RIMS3Q9UJD0 308 aa15.55■□□□□ 0.08
SDCBP-201ENST00000260130 PACSIN3Q9UKS6 424 aa15.55■□□□□ 0.08
SDCBP-201ENST00000260130 TMEM200CA6NKL6 621 aa15.55■□□□□ 0.08
SDCBP-201ENST00000260130 DNAJA2O60884 412 aa15.55■□□□□ 0.08
SDCBP-201ENST00000260130 CT62P0C5K7 136 aa15.55■□□□□ 0.08
SDCBP-201ENST00000260130 DUSP2Q05923 314 aa15.55■□□□□ 0.08
SDCBP-201ENST00000260130 CEACAM7Q14002 265 aa15.55■□□□□ 0.08
SDCBP-201ENST00000260130 ZNF169Q14929 603 aaPredicted RBP15.55■□□□□ 0.08
SDCBP-201ENST00000260130 CCDC116Q8IYX3 515 aa15.55■□□□□ 0.08
SDCBP-201ENST00000260130 FNDC5Q8NAU1 212 aa15.55■□□□□ 0.08
SDCBP-201ENST00000260130 BHLHE22Q8NFJ8 381 aaPredicted RBP15.55■□□□□ 0.08
SDCBP-201ENST00000260130 CEP70Q8NHQ1 597 aa15.55■□□□□ 0.08
SDCBP-201ENST00000260130 UTP23Q9BRU9 249 aaKnown RBP15.55■□□□□ 0.08
SDCBP-201ENST00000260130 LIN28AQ9H9Z2 209 aaKnown RBP15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms