RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 ZBTB20Q9HC78 741 aaPredicted RBP12.71□□□□□ -0.37
PRPF38A-201ENST00000257181 NDRG3Q9UGV2 375 aa12.71□□□□□ -0.37
PRPF38A-201ENST00000257181 PCDHGA8Q9Y5G5 932 aa12.71□□□□□ -0.37
PRPF38A-201ENST00000257181 CPMP14384 443 aa12.71□□□□□ -0.37
PRPF38A-201ENST00000257181 C17orf67Q0P5P2 114 aa12.71□□□□□ -0.37
PRPF38A-201ENST00000257181 RIN1Q13671 783 aa12.71□□□□□ -0.37
PRPF38A-201ENST00000257181 PRSS36Q5K4E3 855 aa12.71□□□□□ -0.37
PRPF38A-201ENST00000257181 OR2T5Q6IEZ7 315 aa12.71□□□□□ -0.37
PRPF38A-201ENST00000257181 ACOT4Q8N9L9 421 aa12.71□□□□□ -0.37
PRPF38A-201ENST00000257181 OR2T29Q8NH02 315 aa12.71□□□□□ -0.37
PRPF38A-201ENST00000257181 COQ8BQ96D53 544 aa12.71□□□□□ -0.37
PRPF38A-201ENST00000257181 TRAV17A0A0B4J275 112 aa12.71□□□□□ -0.38
PRPF38A-201ENST00000257181 SPTY2D1-AS1A0A0U1RR47 76 aa12.71□□□□□ -0.38
PRPF38A-201ENST00000257181 hCG_1809904A0A1W2PP81 198 aa12.71□□□□□ -0.38
PRPF38A-201ENST00000257181 A0A1W2PPE2 198 aa12.71□□□□□ -0.38
PRPF38A-201ENST00000257181 A0A1W2PR64 198 aa12.71□□□□□ -0.38
PRPF38A-201ENST00000257181 A0A1W2PRV1 198 aa12.71□□□□□ -0.38
PRPF38A-201ENST00000257181 TCRBV7S3A2A0A539 114 aa12.71□□□□□ -0.38
PRPF38A-201ENST00000257181 FUOMA2VDF0 154 aa12.71□□□□□ -0.38
PRPF38A-201ENST00000257181 LOC110117498-PIK3R3F6TDL0 507 aa12.71□□□□□ -0.38
PRPF38A-201ENST00000257181 H6PDO95479 791 aa12.71□□□□□ -0.38
PRPF38A-201ENST00000257181 FGF4P08620 206 aa12.71□□□□□ -0.38
PRPF38A-201ENST00000257181 SLC35E2BP0CK96 405 aa12.71□□□□□ -0.38
PRPF38A-201ENST00000257181 SLC35E2P0CK97 266 aa12.71□□□□□ -0.38
PRPF38A-201ENST00000257181 CD68P34810 354 aaPredicted RBP12.71□□□□□ -0.38
PRPF38A-201ENST00000257181 UBAP2Q5T6F2 1119 aaKnown RBP12.71□□□□□ -0.38
PRPF38A-201ENST00000257181 BPIFB6Q8NFQ5 453 aa12.71□□□□□ -0.38
PRPF38A-201ENST00000257181 OR6K6Q8NGW6 343 aa12.71□□□□□ -0.38
PRPF38A-201ENST00000257181 PIK3R3Q92569 461 aa12.71□□□□□ -0.38
PRPF38A-201ENST00000257181 ZNF570Q96NI8 536 aa12.71□□□□□ -0.38
PRPF38A-201ENST00000257181 SLC19A3Q9BZV2 496 aa12.71□□□□□ -0.38
PRPF38A-201ENST00000257181 LAMP5Q9UJQ1 280 aa12.71□□□□□ -0.38
PRPF38A-201ENST00000257181 HTR1AP08908 422 aa12.7□□□□□ -0.38
PRPF38A-201ENST00000257181 RAB14P61106 215 aa12.7□□□□□ -0.38
PRPF38A-201ENST00000257181 ACTA2P62736 377 aa12.7□□□□□ -0.38
PRPF38A-201ENST00000257181 ACTG2P63267 376 aa12.7□□□□□ -0.38
PRPF38A-201ENST00000257181 PQLC1Q8N2U9 271 aa12.7□□□□□ -0.38
PRPF38A-201ENST00000257181 ASB9Q96DX5 294 aa12.7□□□□□ -0.38
PRPF38A-201ENST00000257181 OR52B2Q96RD2 323 aa12.7□□□□□ -0.38
PRPF38A-201ENST00000257181 YIPF4Q9BSR8 244 aa12.7□□□□□ -0.38
PRPF38A-201ENST00000257181 HSD3B7Q9H2F3 369 aa12.7□□□□□ -0.38
PRPF38A-201ENST00000257181 DYNLRB1Q9NP97 96 aa12.7□□□□□ -0.38
PRPF38A-201ENST00000257181 PCTPQ9UKL6 214 aa12.7□□□□□ -0.38
PRPF38A-201ENST00000257181 ST14Q9Y5Y6 855 aa12.7□□□□□ -0.38
PRPF38A-201ENST00000257181 C4orf47A7E2U8 309 aa12.7□□□□□ -0.38
PRPF38A-201ENST00000257181 CBX6O95503 412 aa12.7□□□□□ -0.38
PRPF38A-201ENST00000257181 EPHA8P29322 1005 aaPredicted RBP12.7□□□□□ -0.38
PRPF38A-201ENST00000257181 ELAVL1Q15717 326 aaKnown RBP12.7□□□□□ -0.38
PRPF38A-201ENST00000257181 OR2A2Q6IF42 318 aa12.7□□□□□ -0.38
PRPF38A-201ENST00000257181 ALYREFQ86V81 257 aaKnown RBP12.7□□□□□ -0.38
PRPF38A-201ENST00000257181 POGLUT1Q8NBL1 392 aa12.7□□□□□ -0.38
PRPF38A-201ENST00000257181 PSD4Q8NDX1 1056 aa12.7□□□□□ -0.38
PRPF38A-201ENST00000257181 COQ10AQ96MF6 247 aa12.7□□□□□ -0.38
PRPF38A-201ENST00000257181 GPR87Q9BY21 358 aa12.7□□□□□ -0.38
PRPF38A-201ENST00000257181 AIG1Q9NVV5 245 aa12.7□□□□□ -0.38
PRPF38A-201ENST00000257181 TNFRSF10DQ9UBN6 386 aa12.7□□□□□ -0.38
PRPF38A-201ENST00000257181 RSL24D1Q9UHA3 163 aaKnown RBP12.7□□□□□ -0.38
PRPF38A-201ENST00000257181 MEMO1Q9Y316 297 aa12.7□□□□□ -0.38
PRPF38A-201ENST00000257181 GXYLT2A0PJZ3 443 aa12.7□□□□□ -0.38
PRPF38A-201ENST00000257181 ENO4A6NNW6 628 aa12.7□□□□□ -0.38
PRPF38A-201ENST00000257181 RBMXL2O75526 392 aaKnown RBP12.7□□□□□ -0.38
PRPF38A-201ENST00000257181 H2BFMP0C1H6 154 aa12.7□□□□□ -0.38
PRPF38A-201ENST00000257181 G6PDP11413 515 aa12.7□□□□□ -0.38
PRPF38A-201ENST00000257181 PNLIPP16233 465 aa12.7□□□□□ -0.38
PRPF38A-201ENST00000257181 GABRG2P18507 467 aa12.7□□□□□ -0.38
PRPF38A-201ENST00000257181 TCEA1P23193 301 aaKnown RBP12.7□□□□□ -0.38
PRPF38A-201ENST00000257181 GDF5P43026 501 aa12.7□□□□□ -0.38
PRPF38A-201ENST00000257181 CCL11P51671 97 aa12.7□□□□□ -0.38
PRPF38A-201ENST00000257181 WBP2NLQ6ICG8 309 aa12.7□□□□□ -0.38
PRPF38A-201ENST00000257181 BTN2A1Q7KYR7 527 aa12.7□□□□□ -0.38
PRPF38A-201ENST00000257181 LGI4Q8N135 537 aa12.7□□□□□ -0.38
PRPF38A-201ENST00000257181 OR2L3Q8NG85 312 aa12.7□□□□□ -0.38
PRPF38A-201ENST00000257181 SPRYD4Q8WW59 207 aaPredicted RBP12.7□□□□□ -0.38
PRPF38A-201ENST00000257181 FUBP1Q96AE4 644 aaKnown RBP12.7□□□□□ -0.38
PRPF38A-201ENST00000257181 BIRC7Q96CA5 298 aa12.7□□□□□ -0.38
PRPF38A-201ENST00000257181 CENPMQ9NSP4 180 aa12.7□□□□□ -0.38
PRPF38A-201ENST00000257181 TESMINQ9Y4I5 508 aa12.7□□□□□ -0.38
PRPF38A-201ENST00000257181 A0A087WZY1 265 aa12.7□□□□□ -0.38
PRPF38A-201ENST00000257181 SULT2B1O00204 365 aa12.7□□□□□ -0.38
PRPF38A-201ENST00000257181 SLCO2B1O94956 709 aa12.7□□□□□ -0.38
PRPF38A-201ENST00000257181 UBTFL6P0CB48 400 aaPredicted RBP12.7□□□□□ -0.38
PRPF38A-201ENST00000257181 MVKQ03426 396 aa12.7□□□□□ -0.38
PRPF38A-201ENST00000257181 BLMHQ13867 455 aa12.7□□□□□ -0.38
PRPF38A-201ENST00000257181 COL13A1Q5TAT6 717 aaPredicted RBP12.7□□□□□ -0.38
PRPF38A-201ENST00000257181 TMEM107Q6UX40 140 aa12.7□□□□□ -0.38
PRPF38A-201ENST00000257181 COMMD6Q7Z4G1 85 aa12.7□□□□□ -0.38
PRPF38A-201ENST00000257181 ESAMQ96AP7 390 aa12.7□□□□□ -0.38
PRPF38A-201ENST00000257181 SGCZQ96LD1 299 aa12.7□□□□□ -0.38
PRPF38A-201ENST00000257181 HCAR1Q9BXC0 346 aa12.7□□□□□ -0.38
PRPF38A-201ENST00000257181 TEX101Q9BY14 249 aa12.7□□□□□ -0.38
PRPF38A-201ENST00000257181 TOR4AQ9NXH8 423 aa12.7□□□□□ -0.38
PRPF38A-201ENST00000257181 ACTR3BQ9P1U1 418 aa12.7□□□□□ -0.38
PRPF38A-201ENST00000257181 TMEM184BQ9Y519 407 aaPredicted RBP12.7□□□□□ -0.38
PRPF38A-201ENST00000257181 FEZF1A0PJY2 475 aa12.69□□□□□ -0.38
PRPF38A-201ENST00000257181 OR52A4PA6NMU1 304 aa12.69□□□□□ -0.38
PRPF38A-201ENST00000257181 EEDO75530 441 aaKnown RBP12.69□□□□□ -0.38
PRPF38A-201ENST00000257181 RFPL1O75677 317 aa12.69□□□□□ -0.38
PRPF38A-201ENST00000257181 GM2AP17900 193 aa12.69□□□□□ -0.38
PRPF38A-201ENST00000257181 RHCEP18577 417 aa12.69□□□□□ -0.38
PRPF38A-201ENST00000257181 GPR18Q14330 331 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms