RNA–Protein interactions for RNA: ENST00000254719.9

RPA1-201, Transcript of replication protein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA1, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-201ENST00000254719 XCR1P46094 333 aa8.68□□□□□ -1.02
RPA1-201ENST00000254719 XKP51811 444 aa8.68□□□□□ -1.02
RPA1-201ENST00000254719 CYP4F2P78329 520 aa8.68□□□□□ -1.02
RPA1-201ENST00000254719 TPRG1LQ5T0D9 272 aa8.68□□□□□ -1.02
RPA1-201ENST00000254719 KIAA1958Q8N8K9 716 aa8.68□□□□□ -1.02
RPA1-201ENST00000254719 OR5AR1Q8NGP9 310 aa8.68□□□□□ -1.02
RPA1-201ENST00000254719 COL26A1Q96A83 441 aa8.68□□□□□ -1.02
RPA1-201ENST00000254719 SLC6A16Q9GZN6 736 aa8.68□□□□□ -1.02
RPA1-201ENST00000254719 WDR26Q9H7D7 661 aa8.68□□□□□ -1.02
RPA1-201ENST00000254719 ANKRA2Q9H9E1 313 aa8.68□□□□□ -1.02
RPA1-201ENST00000254719 SLC25A19Q9HC21 320 aa8.68□□□□□ -1.02
RPA1-201ENST00000254719 MRPS30Q9NP92 439 aaKnown RBP8.68□□□□□ -1.02
RPA1-201ENST00000254719 C5AR2Q9P296 337 aa8.68□□□□□ -1.02
RPA1-201ENST00000254719 FAM47E-STBD1D6RA91 191 aa8.68□□□□□ -1.02
RPA1-201ENST00000254719 CASKO14936 926 aa8.68□□□□□ -1.02
RPA1-201ENST00000254719 OPN1SWP03999 348 aa8.68□□□□□ -1.02
RPA1-201ENST00000254719 ALPPP05187 535 aa8.68□□□□□ -1.02
RPA1-201ENST00000254719 PTGER1P34995 402 aa8.68□□□□□ -1.02
RPA1-201ENST00000254719 ABATP80404 500 aa8.68□□□□□ -1.02
RPA1-201ENST00000254719 CCDC58Q4VC31 144 aa8.68□□□□□ -1.02
RPA1-201ENST00000254719 PYDC2Q56P42 97 aa8.68□□□□□ -1.02
RPA1-201ENST00000254719 DDI2Q5TDH0 399 aa8.68□□□□□ -1.02
RPA1-201ENST00000254719 LINC00299Q6ZSB3 139 aa8.68□□□□□ -1.02
RPA1-201ENST00000254719 RD3Q7Z3Z2 195 aa8.68□□□□□ -1.02
RPA1-201ENST00000254719 FAM20CQ8IXL6 584 aa8.68□□□□□ -1.02
RPA1-201ENST00000254719 C12orf76Q8N812 135 aaPredicted RBP8.68□□□□□ -1.02
RPA1-201ENST00000254719 DENND6BQ8NEG7 585 aa8.68□□□□□ -1.02
RPA1-201ENST00000254719 OR52N2Q8NGI0 321 aa8.68□□□□□ -1.02
RPA1-201ENST00000254719 OR52J3Q8NH60 311 aa8.68□□□□□ -1.02
RPA1-201ENST00000254719 VANGL1Q8TAA9 524 aaPredicted RBP8.68□□□□□ -1.02
RPA1-201ENST00000254719 BBS10Q8TAM1 723 aa8.68□□□□□ -1.02
RPA1-201ENST00000254719 UFD1Q92890 307 aa8.68□□□□□ -1.02
RPA1-201ENST00000254719 RPP25Q9BUL9 199 aaKnown RBP8.68□□□□□ -1.02
RPA1-201ENST00000254719 MND1Q9BWT6 205 aa8.68□□□□□ -1.02
RPA1-201ENST00000254719 ZC4H2Q9NQZ6 224 aa8.68□□□□□ -1.02
RPA1-201ENST00000254719 ACAD8Q9UKU7 415 aa8.68□□□□□ -1.02
RPA1-201ENST00000254719 ICKQ9UPZ9 632 aa8.68□□□□□ -1.02
RPA1-201ENST00000254719 NBEAQ8NFP9 2946 aa8.68□□□□□ -1.02
RPA1-201ENST00000254719 GRXCR1A8MXD5 290 aa8.68□□□□□ -1.02
RPA1-201ENST00000254719 FAAHO00519 579 aa8.68□□□□□ -1.02
RPA1-201ENST00000254719 IDH3BO43837 385 aa8.68□□□□□ -1.02
RPA1-201ENST00000254719 MT-ND2P03891 347 aa8.68□□□□□ -1.02
RPA1-201ENST00000254719 RFX3P48380 749 aa8.68□□□□□ -1.02
RPA1-201ENST00000254719 DPTQ07507 201 aa8.68□□□□□ -1.02
RPA1-201ENST00000254719 CAMK2BQ13554 666 aa8.68□□□□□ -1.02
RPA1-201ENST00000254719 SSX1Q16384 188 aa8.68□□□□□ -1.02
RPA1-201ENST00000254719 ATAT1Q5SQI0 421 aa8.68□□□□□ -1.02
RPA1-201ENST00000254719 PAMR1Q6UXH9 720 aa8.68□□□□□ -1.02
RPA1-201ENST00000254719 PRSS48Q7RTY5 328 aa8.68□□□□□ -1.02
RPA1-201ENST00000254719 FAM220AQ7Z4H9 259 aa8.68□□□□□ -1.02
RPA1-201ENST00000254719 OR9Q2Q8NGE9 314 aa8.68□□□□□ -1.02
RPA1-201ENST00000254719 HCAR2Q8TDS4 363 aa8.68□□□□□ -1.02
RPA1-201ENST00000254719 GTPBP3Q969Y2 492 aaKnown RBP8.68□□□□□ -1.02
RPA1-201ENST00000254719 EPHX3Q9H6B9 360 aa8.68□□□□□ -1.02
RPA1-201ENST00000254719 C11orf49Q9H6J7 331 aa8.68□□□□□ -1.02
RPA1-201ENST00000254719 ING3Q9NXR8 418 aa8.68□□□□□ -1.02
RPA1-201ENST00000254719 PLEKHM1Q9Y4G2 1056 aa8.68□□□□□ -1.02
RPA1-201ENST00000254719 RNASET2O00584 256 aaKnown RBP8.67□□□□□ -1.02
RPA1-201ENST00000254719 PGRMC2O15173 223 aa8.67□□□□□ -1.02
RPA1-201ENST00000254719 MMP20O60882 483 aa8.67□□□□□ -1.02
RPA1-201ENST00000254719 DHFRP00374 187 aa8.67□□□□□ -1.02
RPA1-201ENST00000254719 HIST1H2ABP04908 130 aa8.67□□□□□ -1.02
RPA1-201ENST00000254719 KLK1P06870 262 aa8.67□□□□□ -1.02
RPA1-201ENST00000254719 RHCEP18577 417 aa8.67□□□□□ -1.02
RPA1-201ENST00000254719 AZGP1P25311 298 aaKnown RBP8.67□□□□□ -1.02
RPA1-201ENST00000254719 ERVK-21P61565 698 aa8.67□□□□□ -1.02
RPA1-201ENST00000254719 TFF2Q03403 129 aa8.67□□□□□ -1.02
RPA1-201ENST00000254719 SUZ12Q15022 739 aaKnown RBP8.67□□□□□ -1.02
RPA1-201ENST00000254719 TMEM35AQ53FP2 167 aa8.67□□□□□ -1.02
RPA1-201ENST00000254719 FAM78AQ5JUQ0 283 aa8.67□□□□□ -1.02
RPA1-201ENST00000254719 USP30Q70CQ3 517 aa8.67□□□□□ -1.02
RPA1-201ENST00000254719 ERN2Q76MJ5 926 aaKnown RBP8.67□□□□□ -1.02
RPA1-201ENST00000254719 HIST3H2AQ7L7L0 130 aa8.67□□□□□ -1.02
RPA1-201ENST00000254719 SLC38A6Q8IZM9 456 aa8.67□□□□□ -1.02
RPA1-201ENST00000254719 RHOXF1Q8NHV9 184 aa8.67□□□□□ -1.02
RPA1-201ENST00000254719 LCN9Q8WX39 176 aa8.67□□□□□ -1.02
RPA1-201ENST00000254719 HIST1H2ACQ93077 130 aa8.67□□□□□ -1.02
RPA1-201ENST00000254719 ZG16BQ96DA0 208 aa8.67□□□□□ -1.02
RPA1-201ENST00000254719 VMP1Q96GC9 406 aa8.67□□□□□ -1.02
RPA1-201ENST00000254719 BARHL1Q9BZE3 327 aa8.67□□□□□ -1.02
RPA1-201ENST00000254719 OR51B5Q9H339 312 aa8.67□□□□□ -1.02
RPA1-201ENST00000254719 LYARQ9NX58 379 aaKnown RBP8.67□□□□□ -1.02
RPA1-201ENST00000254719 PCNX3Q9H6A9 2034 aa8.67□□□□□ -1.02
RPA1-201ENST00000254719 TBC1D3DA0A087WVF3 549 aa8.67□□□□□ -1.02
RPA1-201ENST00000254719 TBC1D3IA0A087WXS9 549 aa8.67□□□□□ -1.02
RPA1-201ENST00000254719 TBC1D3EA0A087X179 549 aa8.67□□□□□ -1.02
RPA1-201ENST00000254719 TBC1D3KA0A087X1G2 549 aa8.67□□□□□ -1.02
RPA1-201ENST00000254719 TBC1D3FA6NER0 549 aaPredicted RBP8.67□□□□□ -1.02
RPA1-201ENST00000254719 LRRC72A6NJI9 287 aa8.67□□□□□ -1.02
RPA1-201ENST00000254719 TBC1D3LB9A6J9 549 aa8.67□□□□□ -1.02
RPA1-201ENST00000254719 FOXE1O00358 373 aaPredicted RBP8.67□□□□□ -1.02
RPA1-201ENST00000254719 TBC1D3HP0C7X1 549 aa8.67□□□□□ -1.02
RPA1-201ENST00000254719 DRD2P14416 443 aa8.67□□□□□ -1.02
RPA1-201ENST00000254719 TAS2R50P59544 299 aa8.67□□□□□ -1.02
RPA1-201ENST00000254719 SELENOWP63302 87 aa8.67□□□□□ -1.02
RPA1-201ENST00000254719 RPP38P78345 283 aaKnown RBP8.67□□□□□ -1.02
RPA1-201ENST00000254719 ILF3Q12906 894 aaKnown RBP eCLIP8.67□□□□□ -1.02
RPA1-201ENST00000254719 NPRL3Q12980 569 aa8.67□□□□□ -1.02
RPA1-201ENST00000254719 HSPB3Q12988 150 aa8.67□□□□□ -1.02
RPA1-201ENST00000254719 PROX2Q3B8N5 592 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms