RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 FAM13CQ8NE31 585 aa22.43■■□□□ 1.18
SDF2L1-201ENST00000248958 GFM2Q969S9 779 aaKnown RBP22.43■■□□□ 1.18
SDF2L1-201ENST00000248958 ITPAQ9BY32 194 aa22.43■■□□□ 1.18
SDF2L1-201ENST00000248958 NXF5Q9H1B4 397 aaKnown RBP22.43■■□□□ 1.18
SDF2L1-201ENST00000248958 GLIPR2Q9H4G4 154 aa22.43■■□□□ 1.18
SDF2L1-201ENST00000248958 ZNF395Q9H8N7 513 aaPredicted RBP22.43■■□□□ 1.18
SDF2L1-201ENST00000248958 VIPAS39Q9H9C1 493 aa22.43■■□□□ 1.18
SDF2L1-201ENST00000248958 EIF3LQ9Y262 564 aaKnown RBP22.43■■□□□ 1.18
SDF2L1-201ENST00000248958 EXPH5Q8NEV8 1989 aa22.42■■□□□ 1.18
SDF2L1-201ENST00000248958 A0A1B0GUH1 482 aa22.42■■□□□ 1.18
SDF2L1-201ENST00000248958 PDPK1O15530 556 aa22.42■■□□□ 1.18
SDF2L1-201ENST00000248958 CCL3P10147 92 aa22.42■■□□□ 1.18
SDF2L1-201ENST00000248958 H2AFXP16104 143 aaPredicted RBP22.42■■□□□ 1.18
SDF2L1-201ENST00000248958 ABCD3P28288 659 aa22.42■■□□□ 1.18
SDF2L1-201ENST00000248958 HPCAL1P37235 193 aa22.42■■□□□ 1.18
SDF2L1-201ENST00000248958 KCNK10P57789 538 aa22.42■■□□□ 1.18
SDF2L1-201ENST00000248958 PLGLB1Q02325 96 aa22.42■■□□□ 1.18
SDF2L1-201ENST00000248958 PDE7AQ13946 482 aa22.42■■□□□ 1.18
SDF2L1-201ENST00000248958 SLC22A16Q86VW1 577 aa22.42■■□□□ 1.18
SDF2L1-201ENST00000248958 LRRC34Q8IZ02 419 aa22.42■■□□□ 1.18
SDF2L1-201ENST00000248958 NATD1Q8N6N6 113 aa22.42■■□□□ 1.18
SDF2L1-201ENST00000248958 MGARPQ8TDB4 240 aa22.42■■□□□ 1.18
SDF2L1-201ENST00000248958 ZBED6CLQ96FA7 236 aaPredicted RBP22.42■■□□□ 1.18
SDF2L1-201ENST00000248958 AMDHD1Q96NU7 426 aa22.42■■□□□ 1.18
SDF2L1-201ENST00000248958 IL1RL2Q9HB29 575 aa22.42■■□□□ 1.18
SDF2L1-201ENST00000248958 THAP1Q9NVV9 213 aa22.42■■□□□ 1.18
SDF2L1-201ENST00000248958 SH3BP4Q9P0V3 963 aa22.42■■□□□ 1.18
SDF2L1-201ENST00000248958 BAIAP2L1Q9UHR4 511 aa22.42■■□□□ 1.18
SDF2L1-201ENST00000248958 DTX4Q9Y2E6 619 aa22.42■■□□□ 1.18
SDF2L1-201ENST00000248958 CHCHD2Q9Y6H1 151 aaPredicted RBP22.42■■□□□ 1.18
SDF2L1-201ENST00000248958 ANKRD33BA6NCL7 494 aa22.41■■□□□ 1.18
SDF2L1-201ENST00000248958 FRG2CA6NGY1 282 aa22.41■■□□□ 1.18
SDF2L1-201ENST00000248958 TO15178 435 aa22.41■■□□□ 1.18
SDF2L1-201ENST00000248958 AKAP10O43572 662 aa22.41■■□□□ 1.18
SDF2L1-201ENST00000248958 LRATO95237 230 aa22.41■■□□□ 1.18
SDF2L1-201ENST00000248958 EMX2Q04743 252 aa22.41■■□□□ 1.18
SDF2L1-201ENST00000248958 PDCD2Q16342 344 aaPredicted RBP22.41■■□□□ 1.18
SDF2L1-201ENST00000248958 C4orf17Q53FE4 359 aa22.41■■□□□ 1.18
SDF2L1-201ENST00000248958 RNFT1Q5M7Z0 435 aa22.41■■□□□ 1.18
SDF2L1-201ENST00000248958 IL23RQ5VWK5 629 aa22.41■■□□□ 1.18
SDF2L1-201ENST00000248958 LIX1Q8N485 282 aa22.41■■□□□ 1.18
SDF2L1-201ENST00000248958 SIMC1Q8NDZ2 872 aa22.41■■□□□ 1.18
SDF2L1-201ENST00000248958 OR7G2Q8NG99 324 aa22.41■■□□□ 1.18
SDF2L1-201ENST00000248958 OR10G3Q8NGC4 313 aa22.41■■□□□ 1.18
SDF2L1-201ENST00000248958 BTBD9Q96Q07 612 aa22.41■■□□□ 1.18
SDF2L1-201ENST00000248958 ATP6V1HQ9UI12 483 aa22.41■■□□□ 1.18
SDF2L1-201ENST00000248958 MAPRE3Q9UPY8 281 aa22.41■■□□□ 1.18
SDF2L1-201ENST00000248958 GPR55Q9Y2T6 319 aaPredicted RBP22.41■■□□□ 1.18
SDF2L1-201ENST00000248958 SEMA7AO75326 666 aa22.4■■□□□ 1.18
SDF2L1-201ENST00000248958 PPM1BO75688 479 aa22.4■■□□□ 1.18
SDF2L1-201ENST00000248958 FRKP42685 505 aaPredicted RBP22.4■■□□□ 1.18
SDF2L1-201ENST00000248958 CASP6P55212 293 aa22.4■■□□□ 1.18
SDF2L1-201ENST00000248958 HYAL4Q2M3T9 481 aa22.4■■□□□ 1.18
SDF2L1-201ENST00000248958 PAOXQ6QHF9 649 aa22.4■■□□□ 1.18
SDF2L1-201ENST00000248958 NUP54Q7Z3B4 507 aa22.4■■□□□ 1.18
SDF2L1-201ENST00000248958 GOLGA6L1Q8N7Z2 621 aa22.4■■□□□ 1.18
SDF2L1-201ENST00000248958 CLHC1Q8NHS4 586 aa22.4■■□□□ 1.18
SDF2L1-201ENST00000248958 SPPL2AQ8TCT8 520 aa22.4■■□□□ 1.18
SDF2L1-201ENST00000248958 SSC4DQ8WTU2 575 aa22.4■■□□□ 1.18
SDF2L1-201ENST00000248958 ELP4Q96EB1 424 aa22.4■■□□□ 1.18
SDF2L1-201ENST00000248958 ATP6V1G3Q96LB4 118 aa22.4■■□□□ 1.18
SDF2L1-201ENST00000248958 TTTY12Q9BZ98 90 aa22.4■■□□□ 1.18
SDF2L1-201ENST00000248958 TSPAN10Q9H1Z9 355 aaPredicted RBP22.4■■□□□ 1.18
SDF2L1-201ENST00000248958 ACSS1Q9NUB1 689 aaPredicted RBP22.4■■□□□ 1.18
SDF2L1-201ENST00000248958 ASIC5Q9NY37 505 aa22.4■■□□□ 1.18
SDF2L1-201ENST00000248958 NOP53Q9NZM5 478 aaKnown RBP22.4■■□□□ 1.18
SDF2L1-201ENST00000248958 GIMAP2Q9UG22 337 aa22.4■■□□□ 1.18
SDF2L1-201ENST00000248958 CNOT11Q9UKZ1 510 aaKnown RBP22.4■■□□□ 1.18
SDF2L1-201ENST00000248958 C19orf53Q9UNZ5 99 aaPredicted RBP22.4■■□□□ 1.18
SDF2L1-201ENST00000248958 PRRC2CQ9Y520 2896 aaKnown RBP22.39■■□□□ 1.18
SDF2L1-201ENST00000248958 PINLYPA6NC86 204 aa22.39■■□□□ 1.17
SDF2L1-201ENST00000248958 HS6ST1O60243 411 aa22.39■■□□□ 1.17
SDF2L1-201ENST00000248958 ERN1O75460 977 aaKnown RBP22.39■■□□□ 1.17
SDF2L1-201ENST00000248958 GLSO94925 669 aaPredicted RBP22.39■■□□□ 1.17
SDF2L1-201ENST00000248958 MC3RP41968 323 aa22.39■■□□□ 1.17
SDF2L1-201ENST00000248958 DNASE1L1P49184 302 aa22.39■■□□□ 1.17
SDF2L1-201ENST00000248958 PER3P56645 1201 aa22.39■■□□□ 1.17
SDF2L1-201ENST00000248958 PPIAP62937 165 aaKnown RBP22.39■■□□□ 1.17
SDF2L1-201ENST00000248958 PLCXD2Q0VAA5 305 aa22.39■■□□□ 1.17
SDF2L1-201ENST00000248958 TMEM81Q6P7N7 255 aa22.39■■□□□ 1.17
SDF2L1-201ENST00000248958 TMEM107Q6UX40 140 aa22.39■■□□□ 1.17
SDF2L1-201ENST00000248958 SLC34A3Q8N130 599 aa22.39■■□□□ 1.17
SDF2L1-201ENST00000248958 OR2L13Q8N349 312 aa22.39■■□□□ 1.17
SDF2L1-201ENST00000248958 DIO2Q92813 273 aa22.39■■□□□ 1.17
SDF2L1-201ENST00000248958 ARL8AQ96BM9 186 aa22.39■■□□□ 1.17
SDF2L1-201ENST00000248958 MAGED4Q96JG8 741 aa22.39■■□□□ 1.17
SDF2L1-201ENST00000248958 VSTM2LQ96N03 204 aa22.39■■□□□ 1.17
SDF2L1-201ENST00000248958 PRPF18Q99633 342 aaKnown RBP22.39■■□□□ 1.17
SDF2L1-201ENST00000248958 C1orf50Q9BV19 199 aa22.39■■□□□ 1.17
SDF2L1-201ENST00000248958 MANSC1Q9H8J5 431 aa22.39■■□□□ 1.17
SDF2L1-201ENST00000248958 FOLH1BQ9HBA9 442 aa22.39■■□□□ 1.17
SDF2L1-201ENST00000248958 ATAD3AQ9NVI7 634 aa22.39■■□□□ 1.17
SDF2L1-201ENST00000248958 DDX18Q9NVP1 670 aaKnown RBP22.39■■□□□ 1.17
SDF2L1-201ENST00000248958 BOKQ9UMX3 212 aaPredicted RBP22.39■■□□□ 1.17
SDF2L1-201ENST00000248958 SEC23IPQ9Y6Y8 1000 aaKnown RBP22.39■■□□□ 1.17
SDF2L1-201ENST00000248958 POLEQ07864 2286 aa22.38■■□□□ 1.17
SDF2L1-201ENST00000248958 TTC36A6NLP5 189 aa22.38■■□□□ 1.17
SDF2L1-201ENST00000248958 SLCO1B7G3V0H7 640 aa22.38■■□□□ 1.17
SDF2L1-201ENST00000248958 G3V3Y1 287 aa22.38■■□□□ 1.17
SDF2L1-201ENST00000248958 SCAMP2O15127 329 aaKnown RBP22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms