RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 MTFR2Q6P444 385 aa11.76□□□□□ -0.53
VPREB3-201ENST00000248948 TMEM81Q6P7N7 255 aa11.76□□□□□ -0.53
VPREB3-201ENST00000248948 Q6ZPB1 254 aaPredicted RBP11.76□□□□□ -0.53
VPREB3-201ENST00000248948 FAM109AQ8N4B1 249 aa11.76□□□□□ -0.53
VPREB3-201ENST00000248948 FAM13CQ8NE31 585 aa11.76□□□□□ -0.53
VPREB3-201ENST00000248948 OR10G3Q8NGC4 313 aa11.76□□□□□ -0.53
VPREB3-201ENST00000248948 RELTQ969Z4 430 aa11.76□□□□□ -0.53
VPREB3-201ENST00000248948 TLCD1Q96CP7 247 aa11.76□□□□□ -0.53
VPREB3-201ENST00000248948 LCORQ96JN0 433 aaPredicted RBP11.76□□□□□ -0.53
VPREB3-201ENST00000248948 TTTY12Q9BZ98 90 aa11.76□□□□□ -0.53
VPREB3-201ENST00000248948 NXF5Q9H1B4 397 aaKnown RBP11.76□□□□□ -0.53
VPREB3-201ENST00000248948 REEP4Q9H6H4 257 aa11.76□□□□□ -0.53
VPREB3-201ENST00000248948 ZDHHC11Q9H8X9 412 aa11.76□□□□□ -0.53
VPREB3-201ENST00000248948 KCNK9Q9NPC2 374 aa11.76□□□□□ -0.53
VPREB3-201ENST00000248948 PLSCR2Q9NRY7 297 aa11.76□□□□□ -0.53
VPREB3-201ENST00000248948 ZDHHC2Q9UIJ5 367 aa11.76□□□□□ -0.53
VPREB3-201ENST00000248948 CNOT11Q9UKZ1 510 aaKnown RBP11.76□□□□□ -0.53
VPREB3-201ENST00000248948 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.76□□□□□ -0.53
VPREB3-201ENST00000248948 ZNF835Q9Y2P0 537 aa11.76□□□□□ -0.53
VPREB3-201ENST00000248948 RAP2CQ9Y3L5 183 aa11.76□□□□□ -0.53
VPREB3-201ENST00000248948 NPFFR2Q9Y5X5 522 aa11.76□□□□□ -0.53
VPREB3-201ENST00000248948 ICE1Q9Y2F5 2266 aa11.76□□□□□ -0.53
VPREB3-201ENST00000248948 DNAJC13O75165 2243 aa11.75□□□□□ -0.53
VPREB3-201ENST00000248948 WDR91A4D1P6 747 aa11.75□□□□□ -0.53
VPREB3-201ENST00000248948 PLOD2O00469 737 aa11.75□□□□□ -0.53
VPREB3-201ENST00000248948 PDPK1O15530 556 aa11.75□□□□□ -0.53
VPREB3-201ENST00000248948 HS6ST1O60243 411 aa11.75□□□□□ -0.53
VPREB3-201ENST00000248948 PPM1BO75688 479 aa11.75□□□□□ -0.53
VPREB3-201ENST00000248948 PSMG1O95456 288 aa11.75□□□□□ -0.53
VPREB3-201ENST00000248948 JUNP05412 331 aaKnown RBP11.75□□□□□ -0.53
VPREB3-201ENST00000248948 DRD5P21918 477 aa11.75□□□□□ -0.53
VPREB3-201ENST00000248948 RFC3P40938 356 aa11.75□□□□□ -0.53
VPREB3-201ENST00000248948 PPICP45877 212 aa11.75□□□□□ -0.53
VPREB3-201ENST00000248948 KCNJ2P63252 427 aa11.75□□□□□ -0.53
VPREB3-201ENST00000248948 PLGLB1Q02325 96 aa11.75□□□□□ -0.53
VPREB3-201ENST00000248948 PLCXD2Q0VAA5 305 aa11.75□□□□□ -0.53
VPREB3-201ENST00000248948 FOXO1Q12778 655 aa11.75□□□□□ -0.53
VPREB3-201ENST00000248948 MAD2L1Q13257 205 aaPredicted RBP11.75□□□□□ -0.53
VPREB3-201ENST00000248948 MPP2Q14168 576 aa11.75□□□□□ -0.53
VPREB3-201ENST00000248948 SMU1Q2TAY7 513 aa11.75□□□□□ -0.53
VPREB3-201ENST00000248948 C1QL3Q5VWW1 255 aa11.75□□□□□ -0.53
VPREB3-201ENST00000248948 CES4AQ5XG92 561 aa11.75□□□□□ -0.53
VPREB3-201ENST00000248948 ARHGAP11AQ6P4F7 1023 aa11.75□□□□□ -0.53
VPREB3-201ENST00000248948 R3HCC1LQ7Z5L2 792 aaKnown RBP11.75□□□□□ -0.53
VPREB3-201ENST00000248948 LRRC34Q8IZ02 419 aa11.75□□□□□ -0.53
VPREB3-201ENST00000248948 OR2L13Q8N349 312 aa11.75□□□□□ -0.53
VPREB3-201ENST00000248948 ZNF781Q8N8C0 355 aa11.75□□□□□ -0.53
VPREB3-201ENST00000248948 OR7G2Q8NG99 324 aa11.75□□□□□ -0.53
VPREB3-201ENST00000248948 ZFP28Q8NHY6 868 aa11.75□□□□□ -0.53
VPREB3-201ENST00000248948 RAB3IL1Q8TBN0 382 aa11.75□□□□□ -0.53
VPREB3-201ENST00000248948 SPPL2AQ8TCT8 520 aa11.75□□□□□ -0.53
VPREB3-201ENST00000248948 PPCDCQ96CD2 204 aa11.75□□□□□ -0.53
VPREB3-201ENST00000248948 EGLN2Q96KS0 407 aa11.75□□□□□ -0.53
VPREB3-201ENST00000248948 ZNF597Q96LX8 424 aa11.75□□□□□ -0.53
VPREB3-201ENST00000248948 VSTM2LQ96N03 204 aa11.75□□□□□ -0.53
VPREB3-201ENST00000248948 AMDHD1Q96NU7 426 aa11.75□□□□□ -0.53
VPREB3-201ENST00000248948 TSSK3Q96PN8 268 aa11.75□□□□□ -0.53
VPREB3-201ENST00000248948 PSMG3-AS1Q96PY0 264 aa11.75□□□□□ -0.53
VPREB3-201ENST00000248948 GLIPR2Q9H4G4 154 aa11.75□□□□□ -0.53
VPREB3-201ENST00000248948 ZNF703Q9H7S9 590 aaPredicted RBP11.75□□□□□ -0.53
VPREB3-201ENST00000248948 TMBIM4Q9HC24 238 aa11.75□□□□□ -0.53
VPREB3-201ENST00000248948 ASIC5Q9NY37 505 aa11.75□□□□□ -0.53
VPREB3-201ENST00000248948 TAS2R9Q9NYW1 312 aa11.75□□□□□ -0.53
VPREB3-201ENST00000248948 B4GALT7Q9UBV7 327 aa11.75□□□□□ -0.53
VPREB3-201ENST00000248948 UTP20O75691 2785 aaKnown RBP11.74□□□□□ -0.53
VPREB3-201ENST00000248948 PHF3Q92576 2039 aaKnown RBP11.74□□□□□ -0.53
VPREB3-201ENST00000248948 NINQ8N4C6 2090 aa11.74□□□□□ -0.53
VPREB3-201ENST00000248948 TRGV8A0A0C4DH27 118 aa11.74□□□□□ -0.53
VPREB3-201ENST00000248948 LRRTM2O43300 516 aa11.74□□□□□ -0.53
VPREB3-201ENST00000248948 ITM2AO43736 263 aa11.74□□□□□ -0.53
VPREB3-201ENST00000248948 ABCB7O75027 752 aa11.74□□□□□ -0.53
VPREB3-201ENST00000248948 ERN1O75460 977 aaKnown RBP11.74□□□□□ -0.53
VPREB3-201ENST00000248948 LYPLA1O75608 230 aaPredicted RBP11.74□□□□□ -0.53
VPREB3-201ENST00000248948 SNX4O95219 450 aa11.74□□□□□ -0.53
VPREB3-201ENST00000248948 RNF224P0DH78 156 aa11.74□□□□□ -0.53
VPREB3-201ENST00000248948 PRPS2P11908 318 aa11.74□□□□□ -0.53
VPREB3-201ENST00000248948 BCKDHAP12694 445 aa11.74□□□□□ -0.53
VPREB3-201ENST00000248948 ABOP16442 354 aa11.74□□□□□ -0.53
VPREB3-201ENST00000248948 MC3RP41968 323 aa11.74□□□□□ -0.53
VPREB3-201ENST00000248948 FRKP42685 505 aaPredicted RBP11.74□□□□□ -0.53
VPREB3-201ENST00000248948 SLC1A6P48664 564 aa11.74□□□□□ -0.53
VPREB3-201ENST00000248948 DNASE1L1P49184 302 aa11.74□□□□□ -0.53
VPREB3-201ENST00000248948 NNATQ16517 81 aa11.74□□□□□ -0.53
VPREB3-201ENST00000248948 C6orf136Q5SQH8 315 aa11.74□□□□□ -0.53
VPREB3-201ENST00000248948 PRAMEF20Q5VT98 475 aa11.74□□□□□ -0.53
VPREB3-201ENST00000248948 HHATQ5VTY9 493 aa11.74□□□□□ -0.53
VPREB3-201ENST00000248948 PAOXQ6QHF9 649 aa11.74□□□□□ -0.53
VPREB3-201ENST00000248948 TMEM107Q6UX40 140 aa11.74□□□□□ -0.53
VPREB3-201ENST00000248948 SPPL2CQ8IUH8 684 aa11.74□□□□□ -0.53
VPREB3-201ENST00000248948 CHERPQ8IWX8 916 aaKnown RBP11.74□□□□□ -0.53
VPREB3-201ENST00000248948 SLC34A3Q8N130 599 aa11.74□□□□□ -0.53
VPREB3-201ENST00000248948 EID3Q8N140 333 aa11.74□□□□□ -0.53
VPREB3-201ENST00000248948 FNDC5Q8NAU1 212 aa11.74□□□□□ -0.53
VPREB3-201ENST00000248948 SIMC1Q8NDZ2 872 aa11.74□□□□□ -0.53
VPREB3-201ENST00000248948 DIO2Q92813 273 aa11.74□□□□□ -0.53
VPREB3-201ENST00000248948 KAT2AQ92830 837 aa11.74□□□□□ -0.53
VPREB3-201ENST00000248948 TUBGCP3Q96CW5 907 aa11.74□□□□□ -0.53
VPREB3-201ENST00000248948 OMA1Q96E52 524 aa11.74□□□□□ -0.53
VPREB3-201ENST00000248948 ZBED6CLQ96FA7 236 aaPredicted RBP11.74□□□□□ -0.53
VPREB3-201ENST00000248948 SORT1Q99523 831 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms