RNA–Protein interactions for RNA: ENST00000233575.6

SNX17-201, Transcript of sorting nexin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX17, Length 2,044 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-201ENST00000233575 VN1R1Q9GZP7 353 aa17.34■□□□□ 0.37
SNX17-201ENST00000233575 AGPAT4Q9NRZ5 378 aa17.34■□□□□ 0.37
SNX17-201ENST00000233575 ZNF639Q9UID6 485 aa17.34■□□□□ 0.37
SNX17-201ENST00000233575 MKL2Q9ULH7 1088 aa17.34■□□□□ 0.37
SNX17-201ENST00000233575 A8MUA0 341 aa17.33■□□□□ 0.37
SNX17-201ENST00000233575 CASQ2O14958 399 aaPredicted RBP17.33■□□□□ 0.37
SNX17-201ENST00000233575 HNRNPRO43390 633 aaKnown RBP17.33■□□□□ 0.37
SNX17-201ENST00000233575 NR2F1P10589 423 aa17.33■□□□□ 0.37
SNX17-201ENST00000233575 ETV5P41161 510 aa17.33■□□□□ 0.37
SNX17-201ENST00000233575 CLCN2P51788 898 aa17.33■□□□□ 0.37
SNX17-201ENST00000233575 DCDP81605 110 aaKnown RBP17.33■□□□□ 0.37
SNX17-201ENST00000233575 DUSP5Q16690 384 aa17.33■□□□□ 0.37
SNX17-201ENST00000233575 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.33■□□□□ 0.37
SNX17-201ENST00000233575 CYP27C1Q4G0S4 372 aa17.33■□□□□ 0.37
SNX17-201ENST00000233575 INTS11Q5TA45 600 aaKnown RBP17.33■□□□□ 0.37
SNX17-201ENST00000233575 CDC73Q6P1J9 531 aa17.33■□□□□ 0.37
SNX17-201ENST00000233575 DHRS13Q6UX07 377 aa17.33■□□□□ 0.37
SNX17-201ENST00000233575 PIP4P1Q86T03 277 aa17.33■□□□□ 0.37
SNX17-201ENST00000233575 KBTBD2Q8IY47 623 aa17.33■□□□□ 0.37
SNX17-201ENST00000233575 SMYD1Q8NB12 490 aa17.33■□□□□ 0.37
SNX17-201ENST00000233575 ADAMTS15Q8TE58 950 aa17.33■□□□□ 0.37
SNX17-201ENST00000233575 CDS1Q92903 461 aa17.33■□□□□ 0.37
SNX17-201ENST00000233575 CMKLR1Q99788 373 aa17.33■□□□□ 0.37
SNX17-201ENST00000233575 CNPPD1Q9BV87 410 aa17.33■□□□□ 0.37
SNX17-201ENST00000233575 FBXO8Q9NRD0 319 aa17.33■□□□□ 0.37
SNX17-201ENST00000233575 PNO1Q9NRX1 252 aaKnown RBP17.33■□□□□ 0.37
SNX17-201ENST00000233575 RPS6KA6Q9UK32 745 aa17.33■□□□□ 0.37
SNX17-201ENST00000233575 ERVK-19Q9WJR5 959 aa17.33■□□□□ 0.37
SNX17-201ENST00000233575 AK5Q9Y6K8 562 aa17.33■□□□□ 0.37
SNX17-201ENST00000233575 SLITRK5O94991 958 aa17.33■□□□□ 0.36
SNX17-201ENST00000233575 TNFRSF1BP20333 461 aa17.33■□□□□ 0.36
SNX17-201ENST00000233575 SERTAD2Q14140 314 aa17.33■□□□□ 0.36
SNX17-201ENST00000233575 ISXQ2M1V0 245 aa17.33■□□□□ 0.36
SNX17-201ENST00000233575 CRB2Q5IJ48 1285 aa17.33■□□□□ 0.36
SNX17-201ENST00000233575 BPHLQ86WA6 291 aaPredicted RBP17.33■□□□□ 0.36
SNX17-201ENST00000233575 AMER2Q8N7J2 671 aa17.33■□□□□ 0.36
SNX17-201ENST00000233575 MESP1Q9BRJ9 268 aa17.33■□□□□ 0.36
SNX17-201ENST00000233575 SLC39A1Q9NY26 324 aa17.33■□□□□ 0.36
SNX17-201ENST00000233575 DTX4Q9Y2E6 619 aa17.33■□□□□ 0.36
SNX17-201ENST00000233575 LOXL2Q9Y4K0 774 aa17.33■□□□□ 0.36
SNX17-201ENST00000233575 IGLV3-12A0A075B6K2 115 aa17.32■□□□□ 0.36
SNX17-201ENST00000233575 TEX51A0A1B0GUA7 166 aa17.32■□□□□ 0.36
SNX17-201ENST00000233575 MEN1O00255 615 aa17.32■□□□□ 0.36
SNX17-201ENST00000233575 CPNE3O75131 537 aaKnown RBP17.32■□□□□ 0.36
SNX17-201ENST00000233575 CNOT3O75175 753 aaKnown RBP17.32■□□□□ 0.36
SNX17-201ENST00000233575 SEMG1P04279 462 aa17.32■□□□□ 0.36
SNX17-201ENST00000233575 ZGLP1P0C6A0 271 aa17.32■□□□□ 0.36
SNX17-201ENST00000233575 FASP25445 335 aa17.32■□□□□ 0.36
SNX17-201ENST00000233575 VHLP40337 213 aa17.32■□□□□ 0.36
SNX17-201ENST00000233575 ILKQ13418 452 aa17.32■□□□□ 0.36
SNX17-201ENST00000233575 TRIP6Q15654 476 aaKnown RBP17.32■□□□□ 0.36
SNX17-201ENST00000233575 NSDHLQ15738 373 aa17.32■□□□□ 0.36
SNX17-201ENST00000233575 EXOSC6Q5RKV6 272 aaKnown RBP17.32■□□□□ 0.36
SNX17-201ENST00000233575 CDCP2Q5VXM1 449 aa17.32■□□□□ 0.36
SNX17-201ENST00000233575 PTPMT1Q8WUK0 201 aaPredicted RBP17.32■□□□□ 0.36
SNX17-201ENST00000233575 SOX17Q9H6I2 414 aaPredicted RBP17.32■□□□□ 0.36
SNX17-201ENST00000233575 THUMPD1Q9NXG2 353 aaKnown RBP17.32■□□□□ 0.36
SNX17-201ENST00000233575 VGLL3A8MV65 326 aa17.31■□□□□ 0.36
SNX17-201ENST00000233575 C17orf105B2RV13 164 aa17.31■□□□□ 0.36
SNX17-201ENST00000233575 SUV39H1O43463 412 aa17.31■□□□□ 0.36
SNX17-201ENST00000233575 ASNA1O43681 348 aa17.31■□□□□ 0.36
SNX17-201ENST00000233575 ZIC2O95409 532 aaPredicted RBP17.31■□□□□ 0.36
SNX17-201ENST00000233575 HBQ1P09105 142 aa17.31■□□□□ 0.36
SNX17-201ENST00000233575 TNNI3P19429 210 aa17.31■□□□□ 0.36
SNX17-201ENST00000233575 MAGEA8P43361 318 aa17.31■□□□□ 0.36
SNX17-201ENST00000233575 SELENOWP63302 87 aa17.31■□□□□ 0.36
SNX17-201ENST00000233575 KCNJ10P78508 379 aa17.31■□□□□ 0.36
SNX17-201ENST00000233575 E2F1Q01094 437 aa17.31■□□□□ 0.36
SNX17-201ENST00000233575 GPAT3Q53EU6 434 aa17.31■□□□□ 0.36
SNX17-201ENST00000233575 FAAH2Q6GMR7 532 aa17.31■□□□□ 0.36
SNX17-201ENST00000233575 FAM199XQ6PEV8 388 aaPredicted RBP17.31■□□□□ 0.36
SNX17-201ENST00000233575 LANCL3Q6ZV70 420 aa17.31■□□□□ 0.36
SNX17-201ENST00000233575 FKBP9P1Q75LS8 142 aa17.31■□□□□ 0.36
SNX17-201ENST00000233575 ZNF321PQ8N8H1 164 aa17.31■□□□□ 0.36
SNX17-201ENST00000233575 ICA1LQ8NDH6 482 aa17.31■□□□□ 0.36
SNX17-201ENST00000233575 DEFB124Q8NES8 71 aa17.31■□□□□ 0.36
SNX17-201ENST00000233575 PIK3R3Q92569 461 aa17.31■□□□□ 0.36
SNX17-201ENST00000233575 TGIF2Q9GZN2 237 aa17.31■□□□□ 0.36
SNX17-201ENST00000233575 QRSL1Q9H0R6 528 aaKnown RBP17.31■□□□□ 0.36
SNX17-201ENST00000233575 MAGIXQ9H6Y5 334 aa17.31■□□□□ 0.36
SNX17-201ENST00000233575 ADPRHL2Q9NX46 363 aa17.31■□□□□ 0.36
SNX17-201ENST00000233575 B3GALT1Q9Y5Z6 326 aa17.31■□□□□ 0.36
SNX17-201ENST00000233575 ZNF292O60281 2723 aa17.31■□□□□ 0.36
SNX17-201ENST00000233575 ZFHX2Q9C0A1 2572 aaPredicted RBP17.31■□□□□ 0.36
SNX17-201ENST00000233575 A0A1W2PNU3 283 aaPredicted RBP17.31■□□□□ 0.36
SNX17-201ENST00000233575 TCRBV16S1A1N1A0A5B0 115 aa17.31■□□□□ 0.36
SNX17-201ENST00000233575 H6PDO95479 791 aa17.31■□□□□ 0.36
SNX17-201ENST00000233575 CLPSP04118 112 aa17.31■□□□□ 0.36
SNX17-201ENST00000233575 EMDP50402 254 aa17.31■□□□□ 0.36
SNX17-201ENST00000233575 ANXA11P50995 505 aaKnown RBP17.31■□□□□ 0.36
SNX17-201ENST00000233575 VLDLRP98155 873 aa17.31■□□□□ 0.36
SNX17-201ENST00000233575 DUSP7Q16829 419 aa17.31■□□□□ 0.36
SNX17-201ENST00000233575 OGFRL1Q5TC84 451 aaPredicted RBP17.31■□□□□ 0.36
SNX17-201ENST00000233575 SLCO6A1Q86UG4 719 aa17.31■□□□□ 0.36
SNX17-201ENST00000233575 SLC30A8Q8IWU4 369 aa17.31■□□□□ 0.36
SNX17-201ENST00000233575 DOHHQ9BU89 302 aa17.31■□□□□ 0.36
SNX17-201ENST00000233575 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.3■□□□□ 0.36
SNX17-201ENST00000233575 TMEM247A6NEH6 219 aa17.3■□□□□ 0.36
SNX17-201ENST00000233575 A8MVJ9 347 aa17.3■□□□□ 0.36
SNX17-201ENST00000233575 B4E171 279 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms