RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 UCNP55089 124 aa25.3■■□□□ 1.64
CHMP4B-201ENST00000217402 RPS26P62854 115 aaKnown RBP25.3■■□□□ 1.64
CHMP4B-201ENST00000217402 AIMP2Q13155 320 aaKnown RBP25.3■■□□□ 1.64
CHMP4B-201ENST00000217402 LASP1Q14847 261 aaKnown RBP25.3■■□□□ 1.64
CHMP4B-201ENST00000217402 BHLHB9Q6PI77 547 aa25.3■■□□□ 1.64
CHMP4B-201ENST00000217402 SLC29A4Q7RTT9 530 aa25.3■■□□□ 1.64
CHMP4B-201ENST00000217402 C6orf120Q7Z4R8 191 aa25.3■■□□□ 1.64
CHMP4B-201ENST00000217402 KDF1Q8NAX2 398 aaPredicted RBP25.3■■□□□ 1.64
CHMP4B-201ENST00000217402 DNAJB8Q8NHS0 232 aa25.3■■□□□ 1.64
CHMP4B-201ENST00000217402 ZFP90Q8TF47 636 aa25.3■■□□□ 1.64
CHMP4B-201ENST00000217402 GIMAP5Q96F15 307 aa25.3■■□□□ 1.64
CHMP4B-201ENST00000217402 THOC3Q96J01 351 aaKnown RBP25.3■■□□□ 1.64
CHMP4B-201ENST00000217402 CGREF1Q99674 301 aa25.3■■□□□ 1.64
CHMP4B-201ENST00000217402 YIPF4Q9BSR8 244 aa25.3■■□□□ 1.64
CHMP4B-201ENST00000217402 TRIM8Q9BZR9 551 aa25.3■■□□□ 1.64
CHMP4B-201ENST00000217402 FOLH1BQ9HBA9 442 aa25.3■■□□□ 1.64
CHMP4B-201ENST00000217402 TRBV5-3A0A0A0MS03 114 aa25.29■■□□□ 1.64
CHMP4B-201ENST00000217402 K7ENP7 123 aa25.29■■□□□ 1.64
CHMP4B-201ENST00000217402 ITGA3P26006 1051 aa25.29■■□□□ 1.64
CHMP4B-201ENST00000217402 RNF4P78317 190 aa25.29■■□□□ 1.64
CHMP4B-201ENST00000217402 ART3Q13508 389 aa25.29■■□□□ 1.64
CHMP4B-201ENST00000217402 EBPQ15125 230 aaKnown RBP25.29■■□□□ 1.64
CHMP4B-201ENST00000217402 SAXO2Q658L1 398 aa25.29■■□□□ 1.64
CHMP4B-201ENST00000217402 INO80CQ6PI98 192 aaPredicted RBP25.29■■□□□ 1.64
CHMP4B-201ENST00000217402 JADE3Q92613 823 aa25.29■■□□□ 1.64
CHMP4B-201ENST00000217402 LRRC58Q96CX6 371 aa25.29■■□□□ 1.64
CHMP4B-201ENST00000217402 NEURL3Q96EH8 262 aa25.29■■□□□ 1.64
CHMP4B-201ENST00000217402 OTUB1Q96FW1 271 aaPredicted RBP25.29■■□□□ 1.64
CHMP4B-201ENST00000217402 C16orf58Q96GQ5 468 aa25.29■■□□□ 1.64
CHMP4B-201ENST00000217402 SLC35G5Q96KT7 338 aa25.29■■□□□ 1.64
CHMP4B-201ENST00000217402 ITPAQ9BY32 194 aa25.29■■□□□ 1.64
CHMP4B-201ENST00000217402 DEFB126Q9BYW3 111 aa25.29■■□□□ 1.64
CHMP4B-201ENST00000217402 ING2Q9H160 280 aa25.29■■□□□ 1.64
CHMP4B-201ENST00000217402 TPT1P8Q9HAU6 139 aa25.29■■□□□ 1.64
CHMP4B-201ENST00000217402 GPATCH2Q9NW75 528 aa25.29■■□□□ 1.64
CHMP4B-201ENST00000217402 GID8Q9NWU2 228 aa25.29■■□□□ 1.64
CHMP4B-201ENST00000217402 PRODH2Q9UF12 536 aa25.29■■□□□ 1.64
CHMP4B-201ENST00000217402 ANKRD11Q6UB99 2663 aaPredicted RBP25.28■■□□□ 1.64
CHMP4B-201ENST00000217402 OR6C76A6NM76 312 aa25.28■■□□□ 1.64
CHMP4B-201ENST00000217402 FXYD1O00168 92 aa25.28■■□□□ 1.64
CHMP4B-201ENST00000217402 GABPB1Q06547 395 aaPredicted RBP25.28■■□□□ 1.64
CHMP4B-201ENST00000217402 NNATQ16517 81 aa25.28■■□□□ 1.64
CHMP4B-201ENST00000217402 MFSD12Q6NUT3 480 aa25.28■■□□□ 1.64
CHMP4B-201ENST00000217402 WWTR1Q9GZV5 400 aa25.28■■□□□ 1.64
CHMP4B-201ENST00000217402 EPS8L2Q9H6S3 715 aa25.28■■□□□ 1.64
CHMP4B-201ENST00000217402 LIN28AQ9H9Z2 209 aaKnown RBP25.28■■□□□ 1.64
CHMP4B-201ENST00000217402 LAMA5O15230 3695 aa25.28■■□□□ 1.64
CHMP4B-201ENST00000217402 A8MUI8 341 aa25.27■■□□□ 1.64
CHMP4B-201ENST00000217402 ZFAND5O76080 213 aa25.27■■□□□ 1.64
CHMP4B-201ENST00000217402 T-ENOLP0DO92 83 aa25.27■■□□□ 1.64
CHMP4B-201ENST00000217402 VAC14Q08AM6 782 aa25.27■■□□□ 1.64
CHMP4B-201ENST00000217402 C6orf89Q6UWU4 347 aa25.27■■□□□ 1.64
CHMP4B-201ENST00000217402 RNF130Q86XS8 419 aa25.27■■□□□ 1.64
CHMP4B-201ENST00000217402 FBXO27Q8NI29 283 aa25.27■■□□□ 1.64
CHMP4B-201ENST00000217402 BRIX1Q8TDN6 353 aaKnown RBP25.27■■□□□ 1.64
CHMP4B-201ENST00000217402 ROPN1LQ96C74 230 aa25.27■■□□□ 1.64
CHMP4B-201ENST00000217402 VSTM2LQ96N03 204 aa25.27■■□□□ 1.64
CHMP4B-201ENST00000217402 CFL2Q9Y281 166 aa25.27■■□□□ 1.64
CHMP4B-201ENST00000217402 C2orf92A0A1B0GVN3 265 aa25.26■■□□□ 1.63
CHMP4B-201ENST00000217402 CLIC1O00299 241 aa25.26■■□□□ 1.63
CHMP4B-201ENST00000217402 DNAJB5O75953 348 aa25.26■■□□□ 1.63
CHMP4B-201ENST00000217402 CALB2P22676 271 aa25.26■■□□□ 1.63
CHMP4B-201ENST00000217402 MXRA7P84157 204 aa25.26■■□□□ 1.63
CHMP4B-201ENST00000217402 MYBPC3Q14896 1274 aa25.26■■□□□ 1.63
CHMP4B-201ENST00000217402 HLA-DQA1Q5Y7H0 255 aa25.26■■□□□ 1.63
CHMP4B-201ENST00000217402 FCRLBQ6BAA4 426 aa25.26■■□□□ 1.63
CHMP4B-201ENST00000217402 SIRT6Q8N6T7 355 aa25.26■■□□□ 1.63
CHMP4B-201ENST00000217402 SLC9A6Q92581 669 aa25.26■■□□□ 1.63
CHMP4B-201ENST00000217402 SERHL2Q9H4I8 314 aa25.26■■□□□ 1.63
CHMP4B-201ENST00000217402 FAF1Q9UNN5 650 aaPredicted RBP25.26■■□□□ 1.63
CHMP4B-201ENST00000217402 A6NL46 340 aa25.26■■□□□ 1.63
CHMP4B-201ENST00000217402 UNC5CO95185 931 aa25.26■■□□□ 1.63
CHMP4B-201ENST00000217402 KRT75O95678 551 aa25.26■■□□□ 1.63
CHMP4B-201ENST00000217402 PRIM2P49643 509 aa25.26■■□□□ 1.63
CHMP4B-201ENST00000217402 CORO7P57737 925 aa25.26■■□□□ 1.63
CHMP4B-201ENST00000217402 MTPNP58546 118 aa25.26■■□□□ 1.63
CHMP4B-201ENST00000217402 AP2B1P63010 937 aa25.26■■□□□ 1.63
CHMP4B-201ENST00000217402 CXADRP78310 365 aa25.26■■□□□ 1.63
CHMP4B-201ENST00000217402 RAPSNQ13702 412 aa25.26■■□□□ 1.63
CHMP4B-201ENST00000217402 DDX59Q5T1V6 619 aaKnown RBP eCLIP25.26■■□□□ 1.63
CHMP4B-201ENST00000217402 TNFAIP8L2Q6P589 184 aaPredicted RBP25.26■■□□□ 1.63
CHMP4B-201ENST00000217402 C16orf47Q6ZP98 133 aaPredicted RBP25.26■■□□□ 1.63
CHMP4B-201ENST00000217402 GALNT16Q8N428 558 aa25.26■■□□□ 1.63
CHMP4B-201ENST00000217402 OR8K3Q8NH51 312 aa25.26■■□□□ 1.63
CHMP4B-201ENST00000217402 ANKRD27Q96NW4 1050 aa25.26■■□□□ 1.63
CHMP4B-201ENST00000217402 IKZF5Q9H5V7 419 aa25.26■■□□□ 1.63
CHMP4B-201ENST00000217402 KCNMB2Q9Y691 235 aa25.26■■□□□ 1.63
CHMP4B-201ENST00000217402 NPPAP01160 153 aa25.25■■□□□ 1.63
CHMP4B-201ENST00000217402 MNAT1P51948 309 aa25.25■■□□□ 1.63
CHMP4B-201ENST00000217402 FOXK2Q01167 660 aa25.25■■□□□ 1.63
CHMP4B-201ENST00000217402 SELPLGQ14242 412 aa25.25■■□□□ 1.63
CHMP4B-201ENST00000217402 RUNDC3AQ59EK9 446 aa25.25■■□□□ 1.63
CHMP4B-201ENST00000217402 COX20Q5RI15 118 aa25.25■■□□□ 1.63
CHMP4B-201ENST00000217402 TCTN3Q6NUS6 607 aa25.25■■□□□ 1.63
CHMP4B-201ENST00000217402 OR5D16Q8NGK9 328 aa25.25■■□□□ 1.63
CHMP4B-201ENST00000217402 OR5L2Q8NGL0 311 aa25.25■■□□□ 1.63
CHMP4B-201ENST00000217402 CPPED1Q9BRF8 314 aaPredicted RBP25.25■■□□□ 1.63
CHMP4B-201ENST00000217402 ACTRT3Q9BYD9 372 aa25.25■■□□□ 1.63
CHMP4B-201ENST00000217402 LHPPQ9H008 270 aa25.25■■□□□ 1.63
CHMP4B-201ENST00000217402 ACP2P11117 423 aa25.24■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms