RNA–Protein interactions for RNA: ENST00000199706.12

MRPL28-201, Transcript of mitochondrial ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL28, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-201ENST00000199706 BCAP29Q9UHQ4 241 aa16.05■□□□□ 0.16
MRPL28-201ENST00000199706 ATP6V1HQ9UI12 483 aa16.05■□□□□ 0.16
MRPL28-201ENST00000199706 C19orf53Q9UNZ5 99 aaPredicted RBP16.05■□□□□ 0.16
MRPL28-201ENST00000199706 GPR55Q9Y2T6 319 aaPredicted RBP16.05■□□□□ 0.16
MRPL28-201ENST00000199706 NPFFR2Q9Y5X5 522 aa16.05■□□□□ 0.16
MRPL28-201ENST00000199706 CHCHD2Q9Y6H1 151 aaPredicted RBP16.05■□□□□ 0.16
MRPL28-201ENST00000199706 EML6Q6ZMW3 1958 aa16.05■□□□□ 0.16
MRPL28-201ENST00000199706 TTC36A6NLP5 189 aa16.04■□□□□ 0.16
MRPL28-201ENST00000199706 TP53I11O14683 189 aa16.04■□□□□ 0.16
MRPL28-201ENST00000199706 SCAMP2O15127 329 aaKnown RBP16.04■□□□□ 0.16
MRPL28-201ENST00000199706 PDPK1O15530 556 aa16.04■□□□□ 0.16
MRPL28-201ENST00000199706 PEX11AO75192 247 aa16.04■□□□□ 0.16
MRPL28-201ENST00000199706 GLSO94925 669 aaPredicted RBP16.04■□□□□ 0.16
MRPL28-201ENST00000199706 P04436 131 aa16.04■□□□□ 0.16
MRPL28-201ENST00000199706 PRPS1L1P21108 318 aa16.04■□□□□ 0.16
MRPL28-201ENST00000199706 CNR1P21554 472 aa16.04■□□□□ 0.16
MRPL28-201ENST00000199706 ABCD3P28288 659 aa16.04■□□□□ 0.16
MRPL28-201ENST00000199706 ST13P50502 369 aaKnown RBP16.04■□□□□ 0.16
MRPL28-201ENST00000199706 NR0B1P51843 470 aaKnown RBP16.04■□□□□ 0.16
MRPL28-201ENST00000199706 NCBP2P52298 156 aaKnown RBP eCLIP16.04■□□□□ 0.16
MRPL28-201ENST00000199706 RPP38P78345 283 aaKnown RBP16.04■□□□□ 0.16
MRPL28-201ENST00000199706 RBPJQ06330 500 aa16.04■□□□□ 0.16
MRPL28-201ENST00000199706 UBAP2LQ14157 1087 aaKnown RBP16.04■□□□□ 0.16
MRPL28-201ENST00000199706 EXOSC7Q15024 291 aaKnown RBP16.04■□□□□ 0.16
MRPL28-201ENST00000199706 PRSS53Q2L4Q9 553 aa16.04■□□□□ 0.16
MRPL28-201ENST00000199706 FAM180BQ6P0A1 224 aa16.04■□□□□ 0.16
MRPL28-201ENST00000199706 FNDC5Q8NAU1 212 aa16.04■□□□□ 0.16
MRPL28-201ENST00000199706 OR7G2Q8NG99 324 aa16.04■□□□□ 0.16
MRPL28-201ENST00000199706 DOK4Q8TEW6 326 aa16.04■□□□□ 0.16
MRPL28-201ENST00000199706 PAIP2Q9BPZ3 127 aaKnown RBP16.04■□□□□ 0.16
MRPL28-201ENST00000199706 ITPAQ9BY32 194 aa16.04■□□□□ 0.16
MRPL28-201ENST00000199706 NXF5Q9H1B4 397 aaKnown RBP16.04■□□□□ 0.16
MRPL28-201ENST00000199706 GLIPR2Q9H4G4 154 aa16.04■□□□□ 0.16
MRPL28-201ENST00000199706 MEAF6Q9HAF1 191 aa16.04■□□□□ 0.16
MRPL28-201ENST00000199706 PLSCR2Q9NRY7 297 aa16.04■□□□□ 0.16
MRPL28-201ENST00000199706 NOP53Q9NZM5 478 aaKnown RBP16.04■□□□□ 0.16
MRPL28-201ENST00000199706 NTMQ9P121 344 aa16.04■□□□□ 0.16
MRPL28-201ENST00000199706 EIF3LQ9Y262 564 aaKnown RBP16.04■□□□□ 0.16
MRPL28-201ENST00000199706 DTX4Q9Y2E6 619 aa16.04■□□□□ 0.16
MRPL28-201ENST00000199706 ATP6AP2A0A1C7CYW4 349 aa16.03■□□□□ 0.16
MRPL28-201ENST00000199706 HMGB1P1B2RPK0 211 aaPredicted RBP16.03■□□□□ 0.16
MRPL28-201ENST00000199706 SLCO1B7G3V0H7 640 aa16.03■□□□□ 0.16
MRPL28-201ENST00000199706 ACOT7O00154 380 aa16.03■□□□□ 0.16
MRPL28-201ENST00000199706 ABCB7O75027 752 aa16.03■□□□□ 0.16
MRPL28-201ENST00000199706 ATP6AP2O75787 350 aa16.03■□□□□ 0.16
MRPL28-201ENST00000199706 JUNP05412 331 aaKnown RBP16.03■□□□□ 0.16
MRPL28-201ENST00000199706 CCL3P10147 92 aa16.03■□□□□ 0.16
MRPL28-201ENST00000199706 SRSF1Q07955 248 aaKnown RBP eCLIP16.03■□□□□ 0.16
MRPL28-201ENST00000199706 RNFT1Q5M7Z0 435 aa16.03■□□□□ 0.16
MRPL28-201ENST00000199706 OGFOD2Q6N063 350 aa16.03■□□□□ 0.16
MRPL28-201ENST00000199706 GFRALQ6UXV0 394 aa16.03■□□□□ 0.16
MRPL28-201ENST00000199706 CAMKMTQ7Z624 323 aa16.03■□□□□ 0.16
MRPL28-201ENST00000199706 OR10G3Q8NGC4 313 aa16.03■□□□□ 0.16
MRPL28-201ENST00000199706 HOXB13Q92826 284 aaPredicted RBP16.03■□□□□ 0.16
MRPL28-201ENST00000199706 ARL8AQ96BM9 186 aa16.03■□□□□ 0.16
MRPL28-201ENST00000199706 NTNG2Q96CW9 530 aa16.03■□□□□ 0.16
MRPL28-201ENST00000199706 ZNF395Q9H8N7 513 aaPredicted RBP16.03■□□□□ 0.16
MRPL28-201ENST00000199706 ZDHHC11Q9H8X9 412 aa16.03■□□□□ 0.16
MRPL28-201ENST00000199706 IL1RL2Q9HB29 575 aa16.03■□□□□ 0.16
MRPL28-201ENST00000199706 ATAD3AQ9NVI7 634 aa16.03■□□□□ 0.16
MRPL28-201ENST00000199706 CNOT11Q9UKZ1 510 aaKnown RBP16.03■□□□□ 0.16
MRPL28-201ENST00000199706 DIDO1Q9BTC0 2240 aaKnown RBP16.03■□□□□ 0.16
MRPL28-201ENST00000199706 GTF3C1Q12789 2109 aa16.03■□□□□ 0.16
MRPL28-201ENST00000199706 TFECO14948 347 aaPredicted RBP16.02■□□□□ 0.16
MRPL28-201ENST00000199706 ASNA1O43681 348 aa16.02■□□□□ 0.16
MRPL28-201ENST00000199706 PPM1BO75688 479 aa16.02■□□□□ 0.16
MRPL28-201ENST00000199706 UNC5CO95185 931 aa16.02■□□□□ 0.16
MRPL28-201ENST00000199706 CT45A8P0DMV1 189 aa16.02■□□□□ 0.16
MRPL28-201ENST00000199706 CT45A9P0DMV2 189 aa16.02■□□□□ 0.16
MRPL28-201ENST00000199706 MC3RP41968 323 aa16.02■□□□□ 0.16
MRPL28-201ENST00000199706 OCRLQ01968 901 aa16.02■□□□□ 0.16
MRPL28-201ENST00000199706 FOXO1Q12778 655 aa16.02■□□□□ 0.16
MRPL28-201ENST00000199706 PTGR1Q14914 329 aa16.02■□□□□ 0.16
MRPL28-201ENST00000199706 PDCD2Q16342 344 aaPredicted RBP16.02■□□□□ 0.16
MRPL28-201ENST00000199706 EIF2S3LQ2VIR3 472 aaKnown RBP16.02■□□□□ 0.16
MRPL28-201ENST00000199706 C4orf17Q53FE4 359 aa16.02■□□□□ 0.16
MRPL28-201ENST00000199706 CT45A2Q5DJT8 189 aa16.02■□□□□ 0.16
MRPL28-201ENST00000199706 IL23RQ5VWK5 629 aa16.02■□□□□ 0.16
MRPL28-201ENST00000199706 Q6ZPB1 254 aaPredicted RBP16.02■□□□□ 0.16
MRPL28-201ENST00000199706 SLC22A16Q86VW1 577 aa16.02■□□□□ 0.16
MRPL28-201ENST00000199706 RIMKLAQ8IXN7 391 aa16.02■□□□□ 0.16
MRPL28-201ENST00000199706 SLC34A3Q8N130 599 aa16.02■□□□□ 0.16
MRPL28-201ENST00000199706 GHDCQ8N2G8 530 aa16.02■□□□□ 0.16
MRPL28-201ENST00000199706 LIX1Q8N485 282 aa16.02■□□□□ 0.16
MRPL28-201ENST00000199706 GOLGA6L1Q8N7Z2 621 aa16.02■□□□□ 0.16
MRPL28-201ENST00000199706 KAT2AQ92830 837 aa16.02■□□□□ 0.16
MRPL28-201ENST00000199706 RELTQ969Z4 430 aa16.02■□□□□ 0.16
MRPL28-201ENST00000199706 ELP4Q96EB1 424 aa16.02■□□□□ 0.16
MRPL28-201ENST00000199706 SLC35A4Q96G79 324 aa16.02■□□□□ 0.16
MRPL28-201ENST00000199706 PRPF18Q99633 342 aaKnown RBP16.02■□□□□ 0.16
MRPL28-201ENST00000199706 MANSC1Q9H8J5 431 aa16.02■□□□□ 0.16
MRPL28-201ENST00000199706 DDX18Q9NVP1 670 aaKnown RBP16.02■□□□□ 0.16
MRPL28-201ENST00000199706 BAIAP2L1Q9UHR4 511 aa16.02■□□□□ 0.16
MRPL28-201ENST00000199706 BOKQ9UMX3 212 aaPredicted RBP16.02■□□□□ 0.16
MRPL28-201ENST00000199706 SLC5A6Q9Y289 635 aa16.02■□□□□ 0.16
MRPL28-201ENST00000199706 ZNF835Q9Y2P0 537 aa16.02■□□□□ 0.16
MRPL28-201ENST00000199706 HECTD1Q9ULT8 2610 aa16.02■□□□□ 0.15
MRPL28-201ENST00000199706 DNAJC13O75165 2243 aa16.02■□□□□ 0.15
MRPL28-201ENST00000199706 ZNF407Q9C0G0 2248 aa16.01■□□□□ 0.15
MRPL28-201ENST00000199706 A0A1B0GUH1 482 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms