RNA–Protein interactions for RNA: ENST00000075430.11

CTDP1-201, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CTDP1, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-201ENST00000075430 PROKR2Q8NFJ6 384 aa15.83■□□□□ 0.12
CTDP1-201ENST00000075430 OR6T1Q8NGN1 323 aa15.83■□□□□ 0.12
CTDP1-201ENST00000075430 CHTF18Q8WVB6 975 aa15.83■□□□□ 0.12
CTDP1-201ENST00000075430 ZNF582Q96NG8 517 aaPredicted RBP15.83■□□□□ 0.12
CTDP1-201ENST00000075430 PRAP1Q96NZ9 151 aa15.83■□□□□ 0.12
CTDP1-201ENST00000075430 SLC28A3Q9HAS3 691 aa15.83■□□□□ 0.12
CTDP1-201ENST00000075430 ZC4H2Q9NQZ6 224 aa15.83■□□□□ 0.12
CTDP1-201ENST00000075430 TDP1Q9NUW8 608 aa15.83■□□□□ 0.12
CTDP1-201ENST00000075430 RBFOX1Q9NWB1 397 aaKnown RBP15.83■□□□□ 0.12
CTDP1-201ENST00000075430 WSB2Q9NYS7 404 aaPredicted RBP15.83■□□□□ 0.12
CTDP1-201ENST00000075430 SPEGQ15772 3267 aa15.83■□□□□ 0.12
CTDP1-201ENST00000075430 RNASET2O00584 256 aaKnown RBP15.83■□□□□ 0.12
CTDP1-201ENST00000075430 SMAD9O15198 467 aaKnown RBP15.83■□□□□ 0.12
CTDP1-201ENST00000075430 PROS1P07225 676 aa15.83■□□□□ 0.12
CTDP1-201ENST00000075430 CLDN2P57739 230 aa15.83■□□□□ 0.12
CTDP1-201ENST00000075430 RRAS2P62070 204 aaPredicted RBP15.83■□□□□ 0.12
CTDP1-201ENST00000075430 GDPD1Q8N9F7 314 aa15.83■□□□□ 0.12
CTDP1-201ENST00000075430 RASSF5Q8WWW0 418 aa15.83■□□□□ 0.12
CTDP1-201ENST00000075430 ZG16BQ96DA0 208 aa15.83■□□□□ 0.12
CTDP1-201ENST00000075430 CREBZFQ9NS37 354 aa15.83■□□□□ 0.12
CTDP1-201ENST00000075430 NDUFB11Q9NX14 153 aa15.83■□□□□ 0.12
CTDP1-201ENST00000075430 FBXW2Q9UKT8 454 aa15.83■□□□□ 0.12
CTDP1-201ENST00000075430 LEFTY1O75610 366 aa15.82■□□□□ 0.12
CTDP1-201ENST00000075430 TSPAN9O75954 239 aa15.82■□□□□ 0.12
CTDP1-201ENST00000075430 PTGS2P35354 604 aa15.82■□□□□ 0.12
CTDP1-201ENST00000075430 MTNR1AP48039 350 aa15.82■□□□□ 0.12
CTDP1-201ENST00000075430 TMEM115Q12893 351 aaPredicted RBP15.82■□□□□ 0.12
CTDP1-201ENST00000075430 TMEM25Q86YD3 366 aa15.82■□□□□ 0.12
CTDP1-201ENST00000075430 RDH10Q8IZV5 341 aa15.82■□□□□ 0.12
CTDP1-201ENST00000075430 TBC1D20Q96BZ9 403 aa15.82■□□□□ 0.12
CTDP1-201ENST00000075430 MED30Q96HR3 178 aa15.82■□□□□ 0.12
CTDP1-201ENST00000075430 CHST8Q9H2A9 424 aa15.82■□□□□ 0.12
CTDP1-201ENST00000075430 SERHL2Q9H4I8 314 aa15.82■□□□□ 0.12
CTDP1-201ENST00000075430 C12orf4Q9NQ89 552 aa15.82■□□□□ 0.12
CTDP1-201ENST00000075430 NANSQ9NR45 359 aa15.82■□□□□ 0.12
CTDP1-201ENST00000075430 NPAP1Q9NZP6 1156 aa15.82■□□□□ 0.12
CTDP1-201ENST00000075430 TAAR2Q9P1P5 351 aa15.82■□□□□ 0.12
CTDP1-201ENST00000075430 TAC3Q9UHF0 121 aa15.82■□□□□ 0.12
CTDP1-201ENST00000075430 CBSLP0DN79 551 aa15.82■□□□□ 0.12
CTDP1-201ENST00000075430 ELK1P19419 428 aa15.82■□□□□ 0.12
CTDP1-201ENST00000075430 CXCL3P19876 107 aa15.82■□□□□ 0.12
CTDP1-201ENST00000075430 VIPR1P32241 457 aa15.82■□□□□ 0.12
CTDP1-201ENST00000075430 CBSP35520 551 aa15.82■□□□□ 0.12
CTDP1-201ENST00000075430 TALDO1P37837 337 aa15.82■□□□□ 0.12
CTDP1-201ENST00000075430 RPS5P46782 204 aaKnown RBP15.82■□□□□ 0.12
CTDP1-201ENST00000075430 SFRP4Q6FHJ7 346 aaPredicted RBP15.82■□□□□ 0.12
CTDP1-201ENST00000075430 C22orf39Q6P5X5 142 aa15.82■□□□□ 0.12
CTDP1-201ENST00000075430 SPRYD4Q8WW59 207 aaPredicted RBP15.82■□□□□ 0.12
CTDP1-201ENST00000075430 AP3S1Q92572 193 aa15.82■□□□□ 0.12
CTDP1-201ENST00000075430 AKAP1Q92667 903 aaKnown RBP eCLIP15.82■□□□□ 0.12
CTDP1-201ENST00000075430 ORAI1Q96D31 301 aa15.82■□□□□ 0.12
CTDP1-201ENST00000075430 SPATA9Q9BWV2 254 aa15.82■□□□□ 0.12
CTDP1-201ENST00000075430 REV1Q9UBZ9 1251 aa15.82■□□□□ 0.12
CTDP1-201ENST00000075430 ARAFP10398 606 aa15.82■□□□□ 0.12
CTDP1-201ENST00000075430 GNSP15586 552 aa15.82■□□□□ 0.12
CTDP1-201ENST00000075430 HOXB6P17509 224 aaKnown RBP15.82■□□□□ 0.12
CTDP1-201ENST00000075430 AHRP35869 848 aa15.82■□□□□ 0.12
CTDP1-201ENST00000075430 METAP1P53582 386 aa15.82■□□□□ 0.12
CTDP1-201ENST00000075430 MLLT11Q13015 90 aaPredicted RBP15.82■□□□□ 0.12
CTDP1-201ENST00000075430 GRHL2Q6ISB3 625 aa15.82■□□□□ 0.12
CTDP1-201ENST00000075430 AMER3Q8N944 861 aa15.82■□□□□ 0.12
CTDP1-201ENST00000075430 GANCQ8TET4 914 aa15.82■□□□□ 0.12
CTDP1-201ENST00000075430 TREX2Q9BQ50 279 aaPredicted RBP15.82■□□□□ 0.12
CTDP1-201ENST00000075430 VN1R3Q9BXE9 311 aa15.82■□□□□ 0.12
CTDP1-201ENST00000075430 INSL5Q9Y5Q6 135 aa15.82■□□□□ 0.12
CTDP1-201ENST00000075430 MN1Q10571 1320 aaPredicted RBP15.82■□□□□ 0.12
CTDP1-201ENST00000075430 GFYI3L273 518 aa15.81■□□□□ 0.12
CTDP1-201ENST00000075430 SHC1P29353 583 aa15.81■□□□□ 0.12
CTDP1-201ENST00000075430 AGFG1P52594 562 aaKnown RBP15.81■□□□□ 0.12
CTDP1-201ENST00000075430 WDR5P61964 334 aaKnown RBP15.81■□□□□ 0.12
CTDP1-201ENST00000075430 GGTA1PQ4G0N0 100 aa15.81■□□□□ 0.12
CTDP1-201ENST00000075430 PIAS4Q8N2W9 510 aaPredicted RBP15.81■□□□□ 0.12
CTDP1-201ENST00000075430 OR10H4Q8NGA5 316 aa15.81■□□□□ 0.12
CTDP1-201ENST00000075430 SENP5Q96HI0 755 aaPredicted RBP15.81■□□□□ 0.12
CTDP1-201ENST00000075430 GON7Q9BXV9 100 aa15.81■□□□□ 0.12
CTDP1-201ENST00000075430 OSGEPL1Q9H4B0 414 aa15.81■□□□□ 0.12
CTDP1-201ENST00000075430 HCFC1R1Q9NWW0 138 aa15.81■□□□□ 0.12
CTDP1-201ENST00000075430 FNDC1Q4ZHG4 1894 aaPredicted RBP15.81■□□□□ 0.12
CTDP1-201ENST00000075430 A0A0A6YYJ9 748 aa15.81■□□□□ 0.12
CTDP1-201ENST00000075430 FAM170BA6NMN3 283 aa15.81■□□□□ 0.12
CTDP1-201ENST00000075430 K7ESM1 405 aa15.81■□□□□ 0.12
CTDP1-201ENST00000075430 DDCP20711 480 aa15.81■□□□□ 0.12
CTDP1-201ENST00000075430 MLLT3P42568 568 aaPredicted RBP15.81■□□□□ 0.12
CTDP1-201ENST00000075430 NOGQ13253 232 aa15.81■□□□□ 0.12
CTDP1-201ENST00000075430 SUZ12Q15022 739 aaKnown RBP15.81■□□□□ 0.12
CTDP1-201ENST00000075430 CDKN3Q16667 212 aa15.81■□□□□ 0.12
CTDP1-201ENST00000075430 SLCO4C1Q6ZQN7 724 aa15.81■□□□□ 0.12
CTDP1-201ENST00000075430 PRSS45Q7RTY3 260 aa15.81■□□□□ 0.12
CTDP1-201ENST00000075430 ANKK1Q8NFD2 765 aa15.81■□□□□ 0.12
CTDP1-201ENST00000075430 ING5Q8WYH8 240 aa15.81■□□□□ 0.12
CTDP1-201ENST00000075430 ISG20L2Q9H9L3 353 aaKnown RBP15.81■□□□□ 0.12
CTDP1-201ENST00000075430 TEX10Q9NXF1 929 aaPredicted RBP15.81■□□□□ 0.12
CTDP1-201ENST00000075430 ENOPH1Q9UHY7 261 aa15.81■□□□□ 0.12
CTDP1-201ENST00000075430 ING4Q9UNL4 249 aa15.81■□□□□ 0.12
CTDP1-201ENST00000075430 TRAPPC4Q9Y296 219 aa15.81■□□□□ 0.12
CTDP1-201ENST00000075430 ADAP00813 363 aa15.81■□□□□ 0.12
CTDP1-201ENST00000075430 RB1P06400 928 aa15.81■□□□□ 0.12
CTDP1-201ENST00000075430 CRYZQ08257 329 aaKnown RBP15.81■□□□□ 0.12
CTDP1-201ENST00000075430 DEFB115Q30KQ5 88 aa15.81■□□□□ 0.12
CTDP1-201ENST00000075430 PIP5KL1Q5T9C9 394 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms