RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 MCUBQ9NWR8 336 aa13.23□□□□□ -0.29
USH1C-201ENST00000005226 MEN1O00255 615 aa13.23□□□□□ -0.29
USH1C-201ENST00000005226 QSOX1O00391 747 aa13.23□□□□□ -0.29
USH1C-201ENST00000005226 TSC22D2O75157 780 aa13.23□□□□□ -0.29
USH1C-201ENST00000005226 ZNF780AO75290 641 aaPredicted RBP13.23□□□□□ -0.29
USH1C-201ENST00000005226 LGI1O95970 557 aa13.23□□□□□ -0.29
USH1C-201ENST00000005226 INHAP05111 366 aa13.23□□□□□ -0.29
USH1C-201ENST00000005226 TRAPPC2P0DI81 140 aa13.23□□□□□ -0.29
USH1C-201ENST00000005226 TRAPPC2BP0DI82 140 aa13.23□□□□□ -0.29
USH1C-201ENST00000005226 CELP19835 753 aa13.23□□□□□ -0.29
USH1C-201ENST00000005226 MMP12P39900 470 aa13.23□□□□□ -0.29
USH1C-201ENST00000005226 IL12RB1P42701 662 aa13.23□□□□□ -0.29
USH1C-201ENST00000005226 CDK5Q00535 292 aa13.23□□□□□ -0.29
USH1C-201ENST00000005226 ALDH6A1Q02252 535 aaKnown RBP13.23□□□□□ -0.29
USH1C-201ENST00000005226 SP3Q02447 781 aa13.23□□□□□ -0.29
USH1C-201ENST00000005226 WSCD2Q2TBF2 565 aa13.23□□□□□ -0.29
USH1C-201ENST00000005226 ZNF805Q5CZA5 627 aa13.23□□□□□ -0.29
USH1C-201ENST00000005226 KIAA1161Q6NSJ0 714 aa13.23□□□□□ -0.29
USH1C-201ENST00000005226 RFPL4BQ6ZWI9 263 aa13.23□□□□□ -0.29
USH1C-201ENST00000005226 DPPA4Q7L190 304 aa13.23□□□□□ -0.29
USH1C-201ENST00000005226 FAM129CQ86XR2 697 aa13.23□□□□□ -0.29
USH1C-201ENST00000005226 MARCH9Q86YJ5 346 aa13.23□□□□□ -0.29
USH1C-201ENST00000005226 MORN4Q8NDC4 146 aa13.23□□□□□ -0.29
USH1C-201ENST00000005226 OR4M1Q8NGD0 313 aa13.23□□□□□ -0.29
USH1C-201ENST00000005226 ZFPM2Q8WW38 1151 aa13.23□□□□□ -0.29
USH1C-201ENST00000005226 UFD1Q92890 307 aa13.23□□□□□ -0.29
USH1C-201ENST00000005226 FAM83CQ9BQN1 747 aa13.23□□□□□ -0.29
USH1C-201ENST00000005226 TM7SF3Q9NS93 570 aa13.23□□□□□ -0.29
USH1C-201ENST00000005226 TDP1Q9NUW8 608 aa13.23□□□□□ -0.29
USH1C-201ENST00000005226 CLCA2Q9UQC9 943 aa13.23□□□□□ -0.29
USH1C-201ENST00000005226 ISM1B1AKI9 464 aa13.22□□□□□ -0.29
USH1C-201ENST00000005226 PLOD3O60568 738 aa13.22□□□□□ -0.29
USH1C-201ENST00000005226 MTNR1AP48039 350 aa13.22□□□□□ -0.29
USH1C-201ENST00000005226 TM4SF4P48230 202 aa13.22□□□□□ -0.29
USH1C-201ENST00000005226 PCBP4P57723 403 aaKnown RBP13.22□□□□□ -0.29
USH1C-201ENST00000005226 EFNB1P98172 346 aa13.22□□□□□ -0.29
USH1C-201ENST00000005226 MESP2Q0VG99 397 aa13.22□□□□□ -0.29
USH1C-201ENST00000005226 CEP78Q5JTW2 689 aa13.22□□□□□ -0.29
USH1C-201ENST00000005226 DDX53Q86TM3 631 aaKnown RBP13.22□□□□□ -0.29
USH1C-201ENST00000005226 ANKK1Q8NFD2 765 aa13.22□□□□□ -0.29
USH1C-201ENST00000005226 BBS1Q8NFJ9 593 aa13.22□□□□□ -0.29
USH1C-201ENST00000005226 C16orf58Q96GQ5 468 aa13.22□□□□□ -0.29
USH1C-201ENST00000005226 ATF6BQ99941 703 aa13.22□□□□□ -0.29
USH1C-201ENST00000005226 ACAD8Q9UKU7 415 aa13.22□□□□□ -0.29
USH1C-201ENST00000005226 GPR55Q9Y2T6 319 aaPredicted RBP13.22□□□□□ -0.29
USH1C-201ENST00000005226 USP34Q70CQ2 3546 aa13.22□□□□□ -0.29
USH1C-201ENST00000005226 TCF20Q9UGU0 1960 aaKnown RBP13.22□□□□□ -0.29
USH1C-201ENST00000005226 A0A087WUU8 490 aa13.22□□□□□ -0.29
USH1C-201ENST00000005226 FAM25AB3EWG3 89 aa13.22□□□□□ -0.29
USH1C-201ENST00000005226 FAM25CB3EWG5 89 aa13.22□□□□□ -0.29
USH1C-201ENST00000005226 FAM25GB3EWG6 89 aa13.22□□□□□ -0.29
USH1C-201ENST00000005226 LYRM1O43325 122 aa13.22□□□□□ -0.29
USH1C-201ENST00000005226 C8AP07357 584 aa13.22□□□□□ -0.29
USH1C-201ENST00000005226 CHRM4P08173 479 aa13.22□□□□□ -0.29
USH1C-201ENST00000005226 C8orf89P0DMQ9 161 aa13.22□□□□□ -0.29
USH1C-201ENST00000005226 HOXD11P31277 338 aaPredicted RBP13.22□□□□□ -0.29
USH1C-201ENST00000005226 EVI2BP34910 448 aa13.22□□□□□ -0.29
USH1C-201ENST00000005226 GPR1P46091 355 aa13.22□□□□□ -0.29
USH1C-201ENST00000005226 AGFG1P52594 562 aaKnown RBP13.22□□□□□ -0.29
USH1C-201ENST00000005226 RAB8AP61006 207 aa13.22□□□□□ -0.29
USH1C-201ENST00000005226 TPBGQ13641 420 aa13.22□□□□□ -0.29
USH1C-201ENST00000005226 ZNF57Q68EA5 555 aaPredicted RBP13.22□□□□□ -0.29
USH1C-201ENST00000005226 SLC30A6Q6NXT4 461 aa13.22□□□□□ -0.29
USH1C-201ENST00000005226 IL20RBQ6UXL0 311 aa13.22□□□□□ -0.29
USH1C-201ENST00000005226 ASB18Q6ZVZ8 466 aa13.22□□□□□ -0.29
USH1C-201ENST00000005226 IKBIPQ70UQ0 350 aa13.22□□□□□ -0.29
USH1C-201ENST00000005226 FAM46AQ96IP4 442 aaKnown RBP13.22□□□□□ -0.29
USH1C-201ENST00000005226 TMEM245Q9H330 911 aa13.22□□□□□ -0.29
USH1C-201ENST00000005226 ZCCHC3Q9NUD5 404 aaKnown RBP13.22□□□□□ -0.29
USH1C-201ENST00000005226 SRRDQ9UH36 339 aa13.22□□□□□ -0.29
USH1C-201ENST00000005226 HSPB11Q9Y547 144 aa13.22□□□□□ -0.29
USH1C-201ENST00000005226 A0A0C4DFX4 3053 aa13.21□□□□□ -0.29
USH1C-201ENST00000005226 A0A1W2PRQ8 180 aa13.21□□□□□ -0.29
USH1C-201ENST00000005226 CPSF4LA6NMK7 179 aaKnown RBP13.21□□□□□ -0.29
USH1C-201ENST00000005226 SEC14L5O43304 696 aa13.21□□□□□ -0.29
USH1C-201ENST00000005226 ERAL1O75616 437 aaKnown RBP13.21□□□□□ -0.29
USH1C-201ENST00000005226 PDE9AO76083 593 aa13.21□□□□□ -0.29
USH1C-201ENST00000005226 SLC2A10O95528 541 aa13.21□□□□□ -0.29
USH1C-201ENST00000005226 ACP2P11117 423 aa13.21□□□□□ -0.29
USH1C-201ENST00000005226 CPN2P22792 545 aa13.21□□□□□ -0.29
USH1C-201ENST00000005226 GZMKP49863 264 aa13.21□□□□□ -0.29
USH1C-201ENST00000005226 KLHL22Q53GT1 634 aa13.21□□□□□ -0.29
USH1C-201ENST00000005226 C3orf38Q5JPI3 329 aa13.21□□□□□ -0.29
USH1C-201ENST00000005226 ZFAND1Q8TCF1 268 aa13.21□□□□□ -0.29
USH1C-201ENST00000005226 SLC35G5Q96KT7 338 aa13.21□□□□□ -0.29
USH1C-201ENST00000005226 GLIPR2Q9H4G4 154 aa13.21□□□□□ -0.29
USH1C-201ENST00000005226 TRIM45Q9H8W5 580 aaPredicted RBP13.21□□□□□ -0.29
USH1C-201ENST00000005226 ZDHHC4Q9NPG8 344 aa13.21□□□□□ -0.29
USH1C-201ENST00000005226 RBFOX1Q9NWB1 397 aaKnown RBP13.21□□□□□ -0.29
USH1C-201ENST00000005226 SLC23A2Q9UGH3 650 aa13.21□□□□□ -0.29
USH1C-201ENST00000005226 GSTK1Q9Y2Q3 226 aa13.21□□□□□ -0.29
USH1C-201ENST00000005226 PLXNA2O75051 1894 aa13.21□□□□□ -0.29
USH1C-201ENST00000005226 GSAPA4D1B5 854 aa13.21□□□□□ -0.29
USH1C-201ENST00000005226 ANTXRLA6NF34 631 aa13.21□□□□□ -0.29
USH1C-201ENST00000005226 C12orf71A8MTZ7 269 aa13.21□□□□□ -0.29
USH1C-201ENST00000005226 GTPBP1O00178 669 aaKnown RBP13.21□□□□□ -0.29
USH1C-201ENST00000005226 SPINT1O43278 529 aa13.21□□□□□ -0.29
USH1C-201ENST00000005226 PI15O43692 258 aa13.21□□□□□ -0.29
USH1C-201ENST00000005226 LCMT2O60294 686 aaKnown RBP13.21□□□□□ -0.29
USH1C-201ENST00000005226 HLA-DMAP28067 261 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms