RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Sphk1Q8CI15 382 aa8.77□□□□□ -1
Ccdc47-201ENSMUST00000002043 Lrrc66Q8K0B3 872 aa8.77□□□□□ -1
Ccdc47-201ENSMUST00000002043 NaxeQ8K4Z3 282 aa8.77□□□□□ -1
Ccdc47-201ENSMUST00000002043 Med9Q8VCS6 142 aa8.77□□□□□ -1
Ccdc47-201ENSMUST00000002043 Olfr202Q8VGQ3 307 aa8.77□□□□□ -1
Ccdc47-201ENSMUST00000002043 MallQ91X49 154 aa8.77□□□□□ -1
Ccdc47-201ENSMUST00000002043 Rwdd2bQ99M03 290 aa8.77□□□□□ -1
Ccdc47-201ENSMUST00000002043 Slc25a27Q9D6D0 322 aa8.77□□□□□ -1
Ccdc47-201ENSMUST00000002043 Kcnip3Q9QXT8 256 aa8.77□□□□□ -1
Ccdc47-201ENSMUST00000002043 Znf536Q8K083 1302 aa8.77□□□□□ -1.01
Ccdc47-201ENSMUST00000002043 Hbb-bh2B2RVB7 147 aa8.77□□□□□ -1.01
Ccdc47-201ENSMUST00000002043 Vmn2r110E9PWD5 858 aa8.77□□□□□ -1.01
Ccdc47-201ENSMUST00000002043 Olfr640E9Q7P5 314 aa8.77□□□□□ -1.01
Ccdc47-201ENSMUST00000002043 2610001J05RikF2Z3Y9 59 aa8.77□□□□□ -1.01
Ccdc47-201ENSMUST00000002043 Man2b1O09159 1013 aa8.77□□□□□ -1.01
Ccdc47-201ENSMUST00000002043 Pdlim3O70209 316 aaKnown RBP8.77□□□□□ -1.01
Ccdc47-201ENSMUST00000002043 P01650 108 aa8.77□□□□□ -1.01
Ccdc47-201ENSMUST00000002043 P01653 108 aa8.77□□□□□ -1.01
Ccdc47-201ENSMUST00000002043 AldoaP05064 364 aaKnown RBP8.77□□□□□ -1.01
Ccdc47-201ENSMUST00000002043 Irf2P23906 349 aa8.77□□□□□ -1.01
Ccdc47-201ENSMUST00000002043 Cd28P31041 218 aa8.77□□□□□ -1.01
Ccdc47-201ENSMUST00000002043 Dsc1P55849 886 aa8.77□□□□□ -1.01
Ccdc47-201ENSMUST00000002043 GaltQ03249 379 aa8.77□□□□□ -1.01
Ccdc47-201ENSMUST00000002043 RelbQ04863 558 aa8.77□□□□□ -1.01
Ccdc47-201ENSMUST00000002043 Mat2aQ3THS6 395 aaKnown RBP8.77□□□□□ -1.01
Ccdc47-201ENSMUST00000002043 JrkQ60976 557 aa8.77□□□□□ -1.01
Ccdc47-201ENSMUST00000002043 Olfr1385Q7TQT1 309 aa8.77□□□□□ -1.01
Ccdc47-201ENSMUST00000002043 Pnma8aQ80VM8 430 aa8.77□□□□□ -1.01
Ccdc47-201ENSMUST00000002043 Sult2a8Q8BGL3 282 aa8.77□□□□□ -1.01
Ccdc47-201ENSMUST00000002043 Acp6Q8BP40 418 aa8.77□□□□□ -1.01
Ccdc47-201ENSMUST00000002043 Peli2Q8BST6 419 aa8.77□□□□□ -1.01
Ccdc47-201ENSMUST00000002043 Zbtb9Q8CDC7 459 aa8.77□□□□□ -1.01
Ccdc47-201ENSMUST00000002043 Vmn1r205Q8R276 316 aa8.77□□□□□ -1.01
Ccdc47-201ENSMUST00000002043 Slc14a1Q8VHL0 384 aa8.77□□□□□ -1.01
Ccdc47-201ENSMUST00000002043 Rnh1Q91VI7 456 aa8.77□□□□□ -1.01
Ccdc47-201ENSMUST00000002043 Slc22a7Q91WU2 540 aa8.77□□□□□ -1.01
Ccdc47-201ENSMUST00000002043 Aco2Q99KI0 780 aaKnown RBP8.77□□□□□ -1.01
Ccdc47-201ENSMUST00000002043 Rab28Q99KL7 221 aa8.77□□□□□ -1.01
Ccdc47-201ENSMUST00000002043 Rab3bQ9CZT8 219 aa8.77□□□□□ -1.01
Ccdc47-201ENSMUST00000002043 Eral1Q9CZU4 437 aaKnown RBP8.77□□□□□ -1.01
Ccdc47-201ENSMUST00000002043 Fbxl20Q9CZV8 436 aa8.77□□□□□ -1.01
Ccdc47-201ENSMUST00000002043 Olfr716Q9EPG6 314 aa8.77□□□□□ -1.01
Ccdc47-201ENSMUST00000002043 Popdc3Q9ES81 291 aa8.77□□□□□ -1.01
Ccdc47-201ENSMUST00000002043 IckQ9JKV2 629 aa8.77□□□□□ -1.01
Ccdc47-201ENSMUST00000002043 Gde1Q9JL56 331 aa8.77□□□□□ -1.01
Ccdc47-201ENSMUST00000002043 Ap1arE9PYF7 298 aa8.77□□□□□ -1.01
Ccdc47-201ENSMUST00000002043 Zfp871G5E905 615 aa8.77□□□□□ -1.01
Ccdc47-201ENSMUST00000002043 Gm8888J3QPX5 126 aa8.77□□□□□ -1.01
Ccdc47-201ENSMUST00000002043 Gm3633L7N233 213 aa8.77□□□□□ -1.01
Ccdc47-201ENSMUST00000002043 Gm9611L7N476 213 aa8.77□□□□□ -1.01
Ccdc47-201ENSMUST00000002043 GzmeP08884 248 aa8.77□□□□□ -1.01
Ccdc47-201ENSMUST00000002043 LplP11152 474 aa8.77□□□□□ -1.01
Ccdc47-201ENSMUST00000002043 Cdk1P11440 297 aa8.77□□□□□ -1.01
Ccdc47-201ENSMUST00000002043 Cxcl9P18340 126 aa8.77□□□□□ -1.01
Ccdc47-201ENSMUST00000002043 Sult4a1P63046 284 aa8.77□□□□□ -1.01
Ccdc47-201ENSMUST00000002043 Znf367Q0VDT2 340 aa8.77□□□□□ -1.01
Ccdc47-201ENSMUST00000002043 SctrQ5FWI2 447 aa8.77□□□□□ -1.01
Ccdc47-201ENSMUST00000002043 Grb10Q60760 621 aa8.77□□□□□ -1.01
Ccdc47-201ENSMUST00000002043 Olfr1115Q7TR53 326 aa8.77□□□□□ -1.01
Ccdc47-201ENSMUST00000002043 Fam181bQ80VF6 417 aa8.77□□□□□ -1.01
Ccdc47-201ENSMUST00000002043 Slitrk5Q810B7 957 aa8.77□□□□□ -1.01
Ccdc47-201ENSMUST00000002043 Gfm1Q8K0D5 751 aaKnown RBP8.77□□□□□ -1.01
Ccdc47-201ENSMUST00000002043 Casc3Q8K3W3 698 aaKnown RBP8.77□□□□□ -1.01
Ccdc47-201ENSMUST00000002043 Olfr450Q8VF81 310 aa8.77□□□□□ -1.01
Ccdc47-201ENSMUST00000002043 Lap3Q9CPY7 519 aa8.77□□□□□ -1.01
Ccdc47-201ENSMUST00000002043 Ramp2Q9WUP0 189 aa8.77□□□□□ -1.01
Ccdc47-201ENSMUST00000002043 Bcl9Q9D219 1425 aa8.77□□□□□ -1.01
Ccdc47-201ENSMUST00000002043 Fthl17bA2AHC5 176 aa8.77□□□□□ -1.01
Ccdc47-201ENSMUST00000002043 Fthl17cA2AHC6 176 aa8.77□□□□□ -1.01
Ccdc47-201ENSMUST00000002043 Slc22a28B2RT89 552 aa8.77□□□□□ -1.01
Ccdc47-201ENSMUST00000002043 E2f3O35261 457 aa8.77□□□□□ -1.01
Ccdc47-201ENSMUST00000002043 Pmp22P16646 161 aa8.77□□□□□ -1.01
Ccdc47-201ENSMUST00000002043 KitlgP20826 273 aa8.77□□□□□ -1.01
Ccdc47-201ENSMUST00000002043 Hcrtr1P58307 416 aa8.77□□□□□ -1.01
Ccdc47-201ENSMUST00000002043 Tmprss11bQ14C59 416 aa8.77□□□□□ -1.01
Ccdc47-201ENSMUST00000002043 Fthl17dQ3SXD1 176 aa8.77□□□□□ -1.01
Ccdc47-201ENSMUST00000002043 Fthl17fQ3SXD2 176 aa8.77□□□□□ -1.01
Ccdc47-201ENSMUST00000002043 Tstd2Q3U269 495 aa8.77□□□□□ -1.01
Ccdc47-201ENSMUST00000002043 Macrod2Q3UYG8 475 aa8.77□□□□□ -1.01
Ccdc47-201ENSMUST00000002043 Cpxcr1Q3V0P1 322 aa8.77□□□□□ -1.01
Ccdc47-201ENSMUST00000002043 Elavl3Q60900 367 aaKnown RBP8.77□□□□□ -1.01
Ccdc47-201ENSMUST00000002043 Tha1Q6XPS7 400 aa8.77□□□□□ -1.01
Ccdc47-201ENSMUST00000002043 Lrrtm2Q8BGA3 515 aa8.77□□□□□ -1.01
Ccdc47-201ENSMUST00000002043 Zfp3Q8BLB0 497 aa8.77□□□□□ -1.01
Ccdc47-201ENSMUST00000002043 Sec22cQ8BXT9 303 aa8.77□□□□□ -1.01
Ccdc47-201ENSMUST00000002043 Fmo9Q8C116 539 aa8.77□□□□□ -1.01
Ccdc47-201ENSMUST00000002043 Olfr357Q8VFP4 308 aa8.77□□□□□ -1.01
Ccdc47-201ENSMUST00000002043 Vmn1r69Q8VIC1 319 aa8.77□□□□□ -1.01
Ccdc47-201ENSMUST00000002043 Acot7Q91V12 381 aa8.77□□□□□ -1.01
Ccdc47-201ENSMUST00000002043 Slc22a30Q96LX3 552 aa8.77□□□□□ -1.01
Ccdc47-201ENSMUST00000002043 Fthl17Q99MX2 176 aa8.77□□□□□ -1.01
Ccdc47-201ENSMUST00000002043 Twist2Q9D030 160 aa8.77□□□□□ -1.01
Ccdc47-201ENSMUST00000002043 Armc10Q9D0L7 306 aa8.77□□□□□ -1.01
Ccdc47-201ENSMUST00000002043 Upf1Q9EPU0 1124 aaKnown RBP8.77□□□□□ -1.01
Ccdc47-201ENSMUST00000002043 Clca3a2Q9EQR4 902 aa8.77□□□□□ -1.01
Ccdc47-201ENSMUST00000002043 Clca3a1Q9QX15 902 aa8.77□□□□□ -1.01
Ccdc47-201ENSMUST00000002043 Spdye4cI6XKQ3 339 aa8.76□□□□□ -1.01
Ccdc47-201ENSMUST00000002043 Agtr1bP29755 359 aa8.76□□□□□ -1.01
Ccdc47-201ENSMUST00000002043 AhrP30561 848 aa8.76□□□□□ -1.01
Ccdc47-201ENSMUST00000002043 VipP32648 170 aa8.76□□□□□ -1.01
Retrieved 100 of 22,080 RNA–protein pairs in 29.8 ms