RNA–Protein interactions for RNA: ENST00000640554.1

SDHD-209, Transcript of succinate dehydrogenase complex subunit D, human

TSL 5

Gene SDHD, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SDHD-209	ENST00000640554	ACOT7	O00154	380 aa		13.16	□□□□□ -0.3
SDHD-209	ENST00000640554	PLOD2	O00469	737 aa		13.16	□□□□□ -0.3
SDHD-209	ENST00000640554	UNC5C	O95185	931 aa		13.16	□□□□□ -0.3
SDHD-209	ENST00000640554	STS	P08842	583 aa		13.16	□□□□□ -0.3
SDHD-209	ENST00000640554	PRPS2	P11908	318 aa		13.16	□□□□□ -0.3
SDHD-209	ENST00000640554	MST1	P26927	711 aa		13.16	□□□□□ -0.3
SDHD-209	ENST00000640554	SLC1A6	P48664	564 aa		13.16	□□□□□ -0.3
SDHD-209	ENST00000640554	ST13	P50502	369 aa	Known RBP	13.16	□□□□□ -0.3
SDHD-209	ENST00000640554	RPL14	P50914	215 aa	Known RBP	13.16	□□□□□ -0.3
SDHD-209	ENST00000640554	NR0B1	P51843	470 aa	Known RBP	13.16	□□□□□ -0.3
SDHD-209	ENST00000640554	CASP6	P55212	293 aa		13.16	□□□□□ -0.3
SDHD-209	ENST00000640554	MAGOH	P61326	146 aa	Known RBP	13.16	□□□□□ -0.3
SDHD-209	ENST00000640554	PMP22	Q01453	160 aa		13.16	□□□□□ -0.3
SDHD-209	ENST00000640554	NTRK2	Q16620	822 aa		13.16	□□□□□ -0.3
SDHD-209	ENST00000640554	C4orf17	Q53FE4	359 aa		13.16	□□□□□ -0.3
SDHD-209	ENST00000640554	ZNF628	Q5EBL2	1059 aa		13.16	□□□□□ -0.3
SDHD-209	ENST00000640554	AGBL2	Q5U5Z8	902 aa		13.16	□□□□□ -0.3
SDHD-209	ENST00000640554	FAM219B	Q5XKK7	198 aa		13.16	□□□□□ -0.3
SDHD-209	ENST00000640554	PAOX	Q6QHF9	649 aa		13.16	□□□□□ -0.3
SDHD-209	ENST00000640554	FAM111B	Q6SJ93	734 aa		13.16	□□□□□ -0.3
SDHD-209	ENST00000640554	LYPD8	Q6UX82	237 aa		13.16	□□□□□ -0.3
SDHD-209	ENST00000640554	SLC22A16	Q86VW1	577 aa		13.16	□□□□□ -0.3
SDHD-209	ENST00000640554	SIAH3	Q8IW03	269 aa		13.16	□□□□□ -0.3
SDHD-209	ENST00000640554	LRRC34	Q8IZ02	419 aa		13.16	□□□□□ -0.3
SDHD-209	ENST00000640554	GHDC	Q8N2G8	530 aa		13.16	□□□□□ -0.3
SDHD-209	ENST00000640554	ADCY4	Q8NFM4	1077 aa		13.16	□□□□□ -0.3
SDHD-209	ENST00000640554	OR2T11	Q8NH01	316 aa		13.16	□□□□□ -0.3
SDHD-209	ENST00000640554	CDC26	Q8NHZ8	85 aa		13.16	□□□□□ -0.3
SDHD-209	ENST00000640554	TLCD1	Q96CP7	247 aa		13.16	□□□□□ -0.3
SDHD-209	ENST00000640554	LCOR	Q96JN0	433 aa	Predicted RBP	13.16	□□□□□ -0.3
SDHD-209	ENST00000640554	REEP4	Q9H6H4	257 aa		13.16	□□□□□ -0.3
SDHD-209	ENST00000640554	SH2D2A	Q9NP31	389 aa		13.16	□□□□□ -0.3
SDHD-209	ENST00000640554	TAS2R9	Q9NYW1	312 aa		13.16	□□□□□ -0.3
SDHD-209	ENST00000640554	HAO1	Q9UJM8	370 aa		13.16	□□□□□ -0.3
SDHD-209	ENST00000640554	TMEM233	B4DJY2	109 aa		13.15	□□□□□ -0.3
SDHD-209	ENST00000640554	NPIPA5	E9PKD4	350 aa		13.15	□□□□□ -0.3
SDHD-209	ENST00000640554	T	O15178	435 aa		13.15	□□□□□ -0.3
SDHD-209	ENST00000640554	ZNF354A	O60765	605 aa	Predicted RBP	13.15	□□□□□ -0.3
SDHD-209	ENST00000640554	COQ9	O75208	318 aa		13.15	□□□□□ -0.3
SDHD-209	ENST00000640554	CBX7	O95931	251 aa		13.15	□□□□□ -0.3
SDHD-209	ENST00000640554	BCKDHA	P12694	445 aa		13.15	□□□□□ -0.3
SDHD-209	ENST00000640554	GPX3	P22352	226 aa		13.15	□□□□□ -0.3
SDHD-209	ENST00000640554	ARRB2	P32121	409 aa		13.15	□□□□□ -0.3
SDHD-209	ENST00000640554	EMD	P50402	254 aa		13.15	□□□□□ -0.3
SDHD-209	ENST00000640554	RPL38	P63173	70 aa	Known RBP	13.15	□□□□□ -0.3
SDHD-209	ENST00000640554	HYAL4	Q2M3T9	481 aa		13.15	□□□□□ -0.3
SDHD-209	ENST00000640554	GALNTL6	Q49A17	601 aa		13.15	□□□□□ -0.3
SDHD-209	ENST00000640554	TRMT12	Q53H54	448 aa	Known RBP	13.15	□□□□□ -0.3
SDHD-209	ENST00000640554	C6orf136	Q5SQH8	315 aa		13.15	□□□□□ -0.3
SDHD-209	ENST00000640554	ATG16L1	Q676U5	607 aa		13.15	□□□□□ -0.3
SDHD-209	ENST00000640554	MTFR2	Q6P444	385 aa		13.15	□□□□□ -0.3
SDHD-209	ENST00000640554	FAM47E	Q6ZV65	393 aa		13.15	□□□□□ -0.3
SDHD-209	ENST00000640554	FBXW8	Q8N3Y1	598 aa		13.15	□□□□□ -0.3
SDHD-209	ENST00000640554	CPSF7	Q8N684	471 aa	Known RBP	13.15	□□□□□ -0.3
SDHD-209	ENST00000640554	OR2M7	Q8NG81	312 aa		13.15	□□□□□ -0.3
SDHD-209	ENST00000640554	OR52R1	Q8NGF1	315 aa		13.15	□□□□□ -0.3
SDHD-209	ENST00000640554	ZFP28	Q8NHY6	868 aa		13.15	□□□□□ -0.3
SDHD-209	ENST00000640554	DOK4	Q8TEW6	326 aa		13.15	□□□□□ -0.3
SDHD-209	ENST00000640554	RELT	Q969Z4	430 aa		13.15	□□□□□ -0.3
SDHD-209	ENST00000640554	ZBED6CL	Q96FA7	236 aa	Predicted RBP	13.15	□□□□□ -0.3
SDHD-209	ENST00000640554	PRPF18	Q99633	342 aa	Known RBP	13.15	□□□□□ -0.3
SDHD-209	ENST00000640554	PAIP2	Q9BPZ3	127 aa	Known RBP	13.15	□□□□□ -0.3
SDHD-209	ENST00000640554	IL1RL2	Q9HB29	575 aa		13.15	□□□□□ -0.3
SDHD-209	ENST00000640554	NPIPA1	Q9UND3	350 aa		13.15	□□□□□ -0.3
SDHD-209	ENST00000640554	OSGIN2	Q9Y236	505 aa		13.15	□□□□□ -0.3
SDHD-209	ENST00000640554	EIF3L	Q9Y262	564 aa	Known RBP	13.15	□□□□□ -0.3
SDHD-209	ENST00000640554	PTGDR2	Q9Y5Y4	395 aa		13.15	□□□□□ -0.3
SDHD-209	ENST00000640554	SHANK1	Q9Y566	2161 aa		13.14	□□□□□ -0.31
SDHD-209	ENST00000640554	FRG2C	A6NGY1	282 aa		13.14	□□□□□ -0.31
SDHD-209	ENST00000640554	TFEC	O14948	347 aa	Predicted RBP	13.14	□□□□□ -0.31
SDHD-209	ENST00000640554	ABCB7	O75027	752 aa		13.14	□□□□□ -0.31
SDHD-209	ENST00000640554	PEX11A	O75192	247 aa		13.14	□□□□□ -0.31
SDHD-209	ENST00000640554	SNX4	O95219	450 aa		13.14	□□□□□ -0.31
SDHD-209	ENST00000640554	SDC1	P18827	310 aa		13.14	□□□□□ -0.31
SDHD-209	ENST00000640554	TACR1	P25103	407 aa		13.14	□□□□□ -0.31
SDHD-209	ENST00000640554	NCBP2	P52298	156 aa	Known RBP eCLIP	13.14	□□□□□ -0.31
SDHD-209	ENST00000640554	PLGLB1	Q02325	96 aa		13.14	□□□□□ -0.31
SDHD-209	ENST00000640554	EMX2	Q04743	252 aa		13.14	□□□□□ -0.31
SDHD-209	ENST00000640554	DUSP2	Q05923	314 aa		13.14	□□□□□ -0.31
SDHD-209	ENST00000640554	PDE7A	Q13946	482 aa		13.14	□□□□□ -0.31
SDHD-209	ENST00000640554	RPS6KA2	Q15349	733 aa		13.14	□□□□□ -0.31
SDHD-209	ENST00000640554	TMEM81	Q6P7N7	255 aa		13.14	□□□□□ -0.31
SDHD-209	ENST00000640554	HDX	Q7Z353	690 aa		13.14	□□□□□ -0.31
SDHD-209	ENST00000640554	NUP54	Q7Z3B4	507 aa		13.14	□□□□□ -0.31
SDHD-209	ENST00000640554	EID3	Q8N140	333 aa		13.14	□□□□□ -0.31
SDHD-209	ENST00000640554	ANKRD42	Q8N9B4	389 aa		13.14	□□□□□ -0.31
SDHD-209	ENST00000640554	FAM13C	Q8NE31	585 aa		13.14	□□□□□ -0.31
SDHD-209	ENST00000640554	OR9A2	Q8NGT5	310 aa		13.14	□□□□□ -0.31
SDHD-209	ENST00000640554	AGR3	Q8TD06	166 aa		13.14	□□□□□ -0.31
SDHD-209	ENST00000640554	SSC4D	Q8WTU2	575 aa		13.14	□□□□□ -0.31
SDHD-209	ENST00000640554	PPCDC	Q96CD2	204 aa		13.14	□□□□□ -0.31
SDHD-209	ENST00000640554	TUBGCP3	Q96CW5	907 aa		13.14	□□□□□ -0.31
SDHD-209	ENST00000640554	EGLN2	Q96KS0	407 aa		13.14	□□□□□ -0.31
SDHD-209	ENST00000640554	AMDHD1	Q96NU7	426 aa		13.14	□□□□□ -0.31
SDHD-209	ENST00000640554	BTBD9	Q96Q07	612 aa		13.14	□□□□□ -0.31
SDHD-209	ENST00000640554	VIPAS39	Q9H9C1	493 aa		13.14	□□□□□ -0.31
SDHD-209	ENST00000640554	ACSS1	Q9NUB1	689 aa	Predicted RBP	13.14	□□□□□ -0.31
SDHD-209	ENST00000640554	THAP1	Q9NVV9	213 aa		13.14	□□□□□ -0.31
SDHD-209	ENST00000640554	BOK	Q9UMX3	212 aa	Predicted RBP	13.14	□□□□□ -0.31
SDHD-209	ENST00000640554	C19orf53	Q9UNZ5	99 aa	Predicted RBP	13.14	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms