RNA–Protein interactions for RNA: ENST00000640036.1

SCN1A-218, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN1A, Length 8,131 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-218ENST00000640036 EIF1AYO14602 144 aaKnown RBP4.77□□□□□ -1.65
SCN1A-218ENST00000640036 TNFRSF21O75509 655 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 TMEM63AO94886 807 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 PEPDP12955 493 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 GABRG2P18507 467 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 LEPRP48357 1165 aaKnown RBP4.77□□□□□ -1.65
SCN1A-218ENST00000640036 KIAA1024LP59773 190 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 KLRB1Q12918 225 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 MARCH8Q5T0T0 291 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 TXNRD3NBQ6F5E7 133 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 TNFAIP8L2Q6P589 184 aaPredicted RBP4.77□□□□□ -1.65
SCN1A-218ENST00000640036 USP51Q70EK9 711 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 MED25Q71SY5 747 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 GHDCQ8N2G8 530 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 ZNF548Q8NEK5 533 aaPredicted RBP4.77□□□□□ -1.65
SCN1A-218ENST00000640036 ADAM19Q9H013 955 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 DEFB127Q9H1M4 99 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 CDC42EP4Q9H3Q1 356 aaKnown RBP4.77□□□□□ -1.65
SCN1A-218ENST00000640036 ESRP2Q9H6T0 727 aaKnown RBP4.77□□□□□ -1.65
SCN1A-218ENST00000640036 ZNF355PQ9NSJ1 428 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 NOCTQ9UK39 431 aaKnown RBP4.77□□□□□ -1.65
SCN1A-218ENST00000640036 PEX16Q9Y5Y5 336 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 MYOFQ9NZM1 2061 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 BLOC1S5-TXNDC5H3BN57 136 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 ALOX12BO75342 701 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 LDLRP01130 860 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 IFNA10P01566 189 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 IFNA7P01567 189 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 IFNA4P05014 189 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 ANXA2P07355 339 aaKnown RBP4.77□□□□□ -1.65
SCN1A-218ENST00000640036 POU2F2P09086 479 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 MPC1LP0DKB6 136 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 S100PP25815 95 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 ERP29P30040 261 aaKnown RBP4.77□□□□□ -1.65
SCN1A-218ENST00000640036 IDH2P48735 452 aaKnown RBP4.77□□□□□ -1.65
SCN1A-218ENST00000640036 TLE3Q04726 772 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 BNIP3Q12983 259 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 SWT1Q5T5J6 900 aaKnown RBP4.77□□□□□ -1.65
SCN1A-218ENST00000640036 SMARCD3Q6STE5 483 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 XKR5Q6UX68 686 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 ARHGAP22Q7Z5H3 698 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 BMP8AQ7Z5Y6 402 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 NLRP14Q86W24 1093 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 C17orf53Q8N3J3 647 aaPredicted RBP4.77□□□□□ -1.65
SCN1A-218ENST00000640036 RFKQ969G6 155 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 DUSP26Q9BV47 211 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 DUSP15Q9H1R2 295 aaPredicted RBP4.77□□□□□ -1.65
SCN1A-218ENST00000640036 PLGRKTQ9HBL7 147 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 ERVK-18Q9QC07 812 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 UBR3Q6ZT12 1888 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 ANKUB1A6NFN9 424 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 ANKRD61A6NGH8 418 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 PPM1BO75688 479 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 OR7A10O76100 309 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 CHRNGP07510 517 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 ACRV1P26436 265 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 PCBD1P61457 104 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 CLCQ05315 142 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 LCP2Q13094 533 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 CLPPQ16740 277 aaPredicted RBP4.77□□□□□ -1.65
SCN1A-218ENST00000640036 SPESP1Q6UW49 350 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 TMPRSS11AQ6ZMR5 421 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 ZNF595Q8IYB9 648 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 ZCCHC7Q8N3Z6 543 aaKnown RBP4.77□□□□□ -1.65
SCN1A-218ENST00000640036 ZNF283Q8N7M2 679 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 ZNF709Q8N972 641 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 GLB1L3Q8NCI6 653 aaPredicted RBP4.77□□□□□ -1.65
SCN1A-218ENST00000640036 OR51Q1Q8NH59 317 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 PEX13Q92968 403 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 ERMAPQ96PL5 475 aaPredicted RBP4.77□□□□□ -1.65
SCN1A-218ENST00000640036 SCNM1Q9BWG6 230 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 LHPPQ9H008 270 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 PAIP1Q9H074 479 aaKnown RBP4.77□□□□□ -1.65
SCN1A-218ENST00000640036 ZNF160Q9HCG1 818 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 TMLHEQ9NVH6 421 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 GIN1Q9NXP7 522 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 GRHPRQ9UBQ7 328 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 DUSP13Q9UII6 198 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 SHROOM3Q8TF72 1996 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 AP1G1O43747 822 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 TIMM8AO60220 97 aaPredicted RBP4.77□□□□□ -1.65
SCN1A-218ENST00000640036 VNN1O95497 513 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 CRYAAP02489 173 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 ZSCAN5DPP0CG00 497 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 ADORA3P0DMS8 318 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 GABRA1P14867 456 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 CHN1P15882 459 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 CFL1P23528 166 aaKnown RBP4.77□□□□□ -1.65
SCN1A-218ENST00000640036 HOXD9P28356 352 aaPredicted RBP4.77□□□□□ -1.65
SCN1A-218ENST00000640036 EFNA3P52797 238 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 XIAPP98170 497 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 PITPNAQ00169 270 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 IL5RAQ01344 420 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 OLFML1Q6UWY5 402 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 NET1Q7Z628 596 aaPredicted RBP4.77□□□□□ -1.65
SCN1A-218ENST00000640036 TECPR1Q7Z6L1 1165 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 UEVLDQ8IX04 471 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 KLHDC8AQ8IYD2 350 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 SCCPDHQ8NBX0 429 aa4.77□□□□□ -1.65
SCN1A-218ENST00000640036 OR52E1Q8NGJ3 308 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms