RNA–Protein interactions for RNA: ENST00000639895.1

SPIN3-231, Transcript of spindlin family member 3, human

TSL 5

Gene SPIN3, Length 4,234 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIN3-231	ENST00000639895	GPR20	Q99678	358 aa		10.81	□□□□□ -0.68
SPIN3-231	ENST00000639895	FNIP2	Q9P278	1114 aa		10.81	□□□□□ -0.68
SPIN3-231	ENST00000639895	TRPS1	Q9UHF7	1281 aa		10.81	□□□□□ -0.68
SPIN3-231	ENST00000639895	SLC6A5	Q9Y345	797 aa		10.81	□□□□□ -0.68
SPIN3-231	ENST00000639895	PCDHB11	Q9Y5F2	797 aa		10.81	□□□□□ -0.68
SPIN3-231	ENST00000639895	PCM1	Q15154	2024 aa		10.81	□□□□□ -0.68
SPIN3-231	ENST00000639895	TRBV23-1	A0A0A0MS06	115 aa		10.8	□□□□□ -0.68
SPIN3-231	ENST00000639895	C13orf42	A0A1B0GVH6	325 aa		10.8	□□□□□ -0.68
SPIN3-231	ENST00000639895		F5H5P2	479 aa		10.8	□□□□□ -0.68
SPIN3-231	ENST00000639895	PI15	O43692	258 aa		10.8	□□□□□ -0.68
SPIN3-231	ENST00000639895	ETFA	P13804	333 aa		10.8	□□□□□ -0.68
SPIN3-231	ENST00000639895	ACVR1B	P36896	505 aa		10.8	□□□□□ -0.68
SPIN3-231	ENST00000639895	DLX5	P56178	289 aa		10.8	□□□□□ -0.68
SPIN3-231	ENST00000639895	C9orf57	Q5W0N0	161 aa		10.8	□□□□□ -0.68
SPIN3-231	ENST00000639895	CLDN19	Q8N6F1	224 aa		10.8	□□□□□ -0.68
SPIN3-231	ENST00000639895	UCN3	Q969E3	161 aa		10.8	□□□□□ -0.68
SPIN3-231	ENST00000639895	ATOH8	Q96SQ7	321 aa		10.8	□□□□□ -0.68
SPIN3-231	ENST00000639895	OSGEPL1	Q9H4B0	414 aa		10.8	□□□□□ -0.68
SPIN3-231	ENST00000639895	RGCC	Q9H4X1	137 aa		10.8	□□□□□ -0.68
SPIN3-231	ENST00000639895	MRM3	Q9HC36	420 aa	Known RBP	10.8	□□□□□ -0.68
SPIN3-231	ENST00000639895	CAPN10	Q9HC96	672 aa		10.8	□□□□□ -0.68
SPIN3-231	ENST00000639895	RCE1	Q9Y256	329 aa		10.8	□□□□□ -0.68
SPIN3-231	ENST00000639895	DYRK1B	Q9Y463	629 aa		10.8	□□□□□ -0.68
SPIN3-231	ENST00000639895	ANXA2P2	A6NMY6	339 aa		10.8	□□□□□ -0.68
SPIN3-231	ENST00000639895	FLRT2	O43155	660 aa		10.8	□□□□□ -0.68
SPIN3-231	ENST00000639895	SC5D	O75845	299 aa		10.8	□□□□□ -0.68
SPIN3-231	ENST00000639895	RHOC	P08134	193 aa		10.8	□□□□□ -0.68
SPIN3-231	ENST00000639895	HOXD4	P09016	255 aa	Predicted RBP	10.8	□□□□□ -0.68
SPIN3-231	ENST00000639895	VAMP1	P23763	118 aa		10.8	□□□□□ -0.68
SPIN3-231	ENST00000639895	MLLT1	Q03111	559 aa	Predicted RBP	10.8	□□□□□ -0.68
SPIN3-231	ENST00000639895	TUSC3	Q13454	348 aa		10.8	□□□□□ -0.68
SPIN3-231	ENST00000639895	DYRK1A	Q13627	763 aa		10.8	□□□□□ -0.68
SPIN3-231	ENST00000639895	SLC5A12	Q1EHB4	618 aa		10.8	□□□□□ -0.68
SPIN3-231	ENST00000639895	OTUD1	Q5VV17	481 aa	Predicted RBP	10.8	□□□□□ -0.68
SPIN3-231	ENST00000639895	RNF219	Q5W0B1	726 aa	Predicted RBP	10.8	□□□□□ -0.68
SPIN3-231	ENST00000639895	OR8S1	Q8NH09	359 aa		10.8	□□□□□ -0.68
SPIN3-231	ENST00000639895	RAET1E	Q8TD07	263 aa		10.8	□□□□□ -0.68
SPIN3-231	ENST00000639895	TMEM174	Q8WUU8	243 aa		10.8	□□□□□ -0.68
SPIN3-231	ENST00000639895	FCAMR	Q8WWV6	532 aa		10.8	□□□□□ -0.68
SPIN3-231	ENST00000639895	NSMAF	Q92636	917 aa		10.8	□□□□□ -0.68
SPIN3-231	ENST00000639895	KLRG1	Q96E93	195 aa		10.8	□□□□□ -0.68
SPIN3-231	ENST00000639895	SLC6A20	Q9NP91	592 aa		10.8	□□□□□ -0.68
SPIN3-231	ENST00000639895	RUVBL1	Q9Y265	456 aa	Known RBP	10.8	□□□□□ -0.68
SPIN3-231	ENST00000639895	SNX11	Q9Y5W9	270 aa		10.8	□□□□□ -0.68
SPIN3-231	ENST00000639895	CFAP20	Q9Y6A4	193 aa	Known RBP	10.8	□□□□□ -0.68
SPIN3-231	ENST00000639895	SIGLEC5	O15389	551 aa		10.8	□□□□□ -0.68
SPIN3-231	ENST00000639895	PRH1	P02810	166 aa		10.8	□□□□□ -0.68
SPIN3-231	ENST00000639895	RPS17	P08708	135 aa	Known RBP	10.8	□□□□□ -0.68
SPIN3-231	ENST00000639895	IRF1	P10914	325 aa		10.8	□□□□□ -0.68
SPIN3-231	ENST00000639895	SORD	Q00796	357 aa		10.8	□□□□□ -0.68
SPIN3-231	ENST00000639895	SIGLEC14	Q08ET2	396 aa		10.8	□□□□□ -0.68
SPIN3-231	ENST00000639895	RBBP4	Q09028	425 aa		10.8	□□□□□ -0.68
SPIN3-231	ENST00000639895	TRAM2	Q15035	370 aa		10.8	□□□□□ -0.68
SPIN3-231	ENST00000639895	FAM74A1	Q5RGS3	127 aa		10.8	□□□□□ -0.68
SPIN3-231	ENST00000639895	LBX2	Q6XYB7	198 aa		10.8	□□□□□ -0.68
SPIN3-231	ENST00000639895	SLC36A4	Q6YBV0	504 aa		10.8	□□□□□ -0.68
SPIN3-231	ENST00000639895	LRRC28	Q86X40	367 aa	Predicted RBP	10.8	□□□□□ -0.68
SPIN3-231	ENST00000639895	GPRC5A	Q8NFJ5	357 aa		10.8	□□□□□ -0.68
SPIN3-231	ENST00000639895	SNX33	Q8WV41	574 aa		10.8	□□□□□ -0.68
SPIN3-231	ENST00000639895	CCDC107	Q8WV48	283 aa		10.8	□□□□□ -0.68
SPIN3-231	ENST00000639895	GAS2L1	Q99501	681 aa	Predicted RBP	10.8	□□□□□ -0.68
SPIN3-231	ENST00000639895	ABCC13	Q9NSE7	274 aa		10.8	□□□□□ -0.68
SPIN3-231	ENST00000639895	GPR171	O14626	319 aa		10.79	□□□□□ -0.68
SPIN3-231	ENST00000639895	PRRG1	O14668	218 aa		10.79	□□□□□ -0.68
SPIN3-231	ENST00000639895	PLA2G10	O15496	165 aa		10.79	□□□□□ -0.68
SPIN3-231	ENST00000639895	PEX10	O60683	326 aa		10.79	□□□□□ -0.68
SPIN3-231	ENST00000639895	PRAF2	O60831	178 aa		10.79	□□□□□ -0.68
SPIN3-231	ENST00000639895	AP1S2	P56377	157 aa		10.79	□□□□□ -0.68
SPIN3-231	ENST00000639895	RBM39	Q14498	530 aa	Known RBP	10.79	□□□□□ -0.68
SPIN3-231	ENST00000639895	SCGB2B2	Q4G0G5	96 aa		10.79	□□□□□ -0.68
SPIN3-231	ENST00000639895	ZNF546	Q86UE3	836 aa		10.79	□□□□□ -0.68
SPIN3-231	ENST00000639895	IQCH	Q86VS3	1027 aa		10.79	□□□□□ -0.68
SPIN3-231	ENST00000639895	CNTN4	Q8IWV2	1026 aa		10.79	□□□□□ -0.68
SPIN3-231	ENST00000639895	NPAS3	Q8IXF0	933 aa		10.79	□□□□□ -0.68
SPIN3-231	ENST00000639895	SFT2D1	Q8WV19	159 aa		10.79	□□□□□ -0.68
SPIN3-231	ENST00000639895	MARVELD3	Q96A59	401 aa		10.79	□□□□□ -0.68
SPIN3-231	ENST00000639895	EGLN2	Q96KS0	407 aa		10.79	□□□□□ -0.68
SPIN3-231	ENST00000639895	ZFP42	Q96MM3	310 aa		10.79	□□□□□ -0.68
SPIN3-231	ENST00000639895	OPALIN	Q96PE5	141 aa		10.79	□□□□□ -0.68
SPIN3-231	ENST00000639895	MINDY3	Q9H8M7	445 aa		10.79	□□□□□ -0.68
SPIN3-231	ENST00000639895	RDH14	Q9HBH5	336 aa		10.79	□□□□□ -0.68
SPIN3-231	ENST00000639895	RLIM	Q9NVW2	624 aa		10.79	□□□□□ -0.68
SPIN3-231	ENST00000639895	FAM120C	Q9NX05	1096 aa	Known RBP	10.79	□□□□□ -0.68
SPIN3-231	ENST00000639895	LINC00587	B1AMM8	73 aa		10.79	□□□□□ -0.68
SPIN3-231	ENST00000639895	GBA	P04062	536 aa		10.79	□□□□□ -0.68
SPIN3-231	ENST00000639895	BCHE	P06276	602 aa		10.79	□□□□□ -0.68
SPIN3-231	ENST00000639895	PTN	P21246	168 aa		10.79	□□□□□ -0.68
SPIN3-231	ENST00000639895	KCNJ3	P48549	501 aa		10.79	□□□□□ -0.68
SPIN3-231	ENST00000639895	HTRA4	P83105	476 aa	Predicted RBP	10.79	□□□□□ -0.68
SPIN3-231	ENST00000639895	SEC23B	Q15437	767 aa		10.79	□□□□□ -0.68
SPIN3-231	ENST00000639895	ZNF79	Q15937	498 aa		10.79	□□□□□ -0.68
SPIN3-231	ENST00000639895	C6orf132	Q5T0Z8	1188 aa		10.79	□□□□□ -0.68
SPIN3-231	ENST00000639895	ADAM5	Q6NVV9	412 aa		10.79	□□□□□ -0.68
SPIN3-231	ENST00000639895	NOXRED1	Q6NXP6	359 aa		10.79	□□□□□ -0.68
SPIN3-231	ENST00000639895	LIX1L	Q8IVB5	337 aa		10.79	□□□□□ -0.68
SPIN3-231	ENST00000639895	OR4M1	Q8NGD0	313 aa		10.79	□□□□□ -0.68
SPIN3-231	ENST00000639895	C14orf79	Q96F83	325 aa		10.79	□□□□□ -0.68
SPIN3-231	ENST00000639895	C1orf74	Q96LT6	269 aa		10.79	□□□□□ -0.68
SPIN3-231	ENST00000639895	ZNF251	Q9BRH9	671 aa		10.79	□□□□□ -0.68
SPIN3-231	ENST00000639895	KATNB1	Q9BVA0	655 aa		10.79	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms