RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 GUK1Q16774 197 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 IMPG1Q17R60 797 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 MICBQ29980 383 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 SOWAHCQ53LP3 525 aaPredicted RBP2.81□□□□□ -1.96
VIM-210ENST00000637053 TMEM196Q5HYL7 178 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 KIAA1755Q5JYT7 1200 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 LCE1AQ5T7P2 110 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 ABHD17BQ5VST6 288 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 IRAK1BP1Q5VVH5 260 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 LAIR1Q6GTX8 287 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 PLEKHA7Q6IQ23 1121 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 ANKRD26P1Q6NSI1 321 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 RHBDD2Q6NTF9 364 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 C11orf63Q6NUN7 778 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 H3F3CQ6NXT2 135 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 GJB7Q6PEY0 223 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 PRSS55Q6UWB4 352 aaPredicted RBP2.81□□□□□ -1.96
VIM-210ENST00000637053 ENPP7Q6UWV6 458 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 FAM159AQ6UWV7 190 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 GDPD4Q6W3E5 623 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 DOK3Q7L591 496 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 P4HA3Q7Z4N8 544 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 ZNF546Q86UE3 836 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 PLXDC1Q8IUK5 500 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 BBS7Q8IWZ6 715 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 GPALPP1Q8IXQ4 340 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 ZNF100Q8IYN0 542 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 BOD1L2Q8IYS8 172 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 C1orf87Q8N0U7 546 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 GPC2Q8N158 579 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 ELMOD1Q8N336 334 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 LCORLQ8N3X6 602 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 CPXM2Q8N436 756 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 LNX2Q8N448 690 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 FBXO39Q8N4B4 442 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 MARVELD2Q8N4S9 558 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 ACBD4Q8NC06 268 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 NECAP1Q8NC96 275 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 FBXO36Q8NEA4 188 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 STXBP6Q8NFX7 210 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 OR7D4Q8NG98 312 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 SPPL2AQ8TCT8 520 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 NEK7Q8TDX7 302 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 CLEC4CQ8WTT0 213 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 ZNF480Q8WV37 535 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 KCTD4Q8WVF5 259 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 SMPDL3AQ92484 453 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 PIGCQ92535 297 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 AP3S1Q92572 193 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 NPIPB3Q92617 1050 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 AKAP1Q92667 903 aaKnown RBP eCLIP2.81□□□□□ -1.96
VIM-210ENST00000637053 MCHR2Q969V1 340 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 CPNE4Q96A23 557 aaPredicted RBP2.81□□□□□ -1.96
VIM-210ENST00000637053 FAM89AQ96GI7 184 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 SMIM10Q96HG1 83 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 AKR1E2Q96JD6 320 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 ZNF333Q96JL9 665 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 C10orf90Q96M02 699 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 CASD1Q96PB1 797 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 ACCSQ96QU6 501 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 OR5B2Q96R09 309 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 OR14A2Q96R54 314 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 NAPGQ99747 312 aaPredicted RBP2.81□□□□□ -1.96
VIM-210ENST00000637053 PRMT1Q99873 361 aaKnown RBP2.81□□□□□ -1.96
VIM-210ENST00000637053 MAPKAP1Q9BPZ7 522 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 KLHDC3Q9BQ90 382 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 ZNF251Q9BRH9 671 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 SLC30A2Q9BRI3 323 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 SEC22CQ9BRL7 303 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 SOX7Q9BT81 388 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 H2AFJQ9BTM1 129 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 DUSP26Q9BV47 211 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 PLA2G12BQ9BX93 195 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 NPLQ9BXD5 320 aaPredicted RBP2.81□□□□□ -1.96
VIM-210ENST00000637053 TRIM9Q9C026 710 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 HOXD1Q9GZZ0 328 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 C11orf54Q9H0W9 315 aaPredicted RBP2.81□□□□□ -1.96
VIM-210ENST00000637053 SLITRK2Q9H156 845 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 KCNK15Q9H427 330 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 WDR54Q9H977 334 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 GPR35Q9HC97 309 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 RNF146Q9NTX7 359 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 RLIMQ9NVW2 624 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 SPHK1Q9NYA1 384 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 TFCP2L1Q9NZI6 479 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 ANKFY1Q9P2R3 1169 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 KLQ9UEF7 1012 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 STOML2Q9UJZ1 356 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP2.81□□□□□ -1.96
VIM-210ENST00000637053 ST3GAL5Q9UNP4 418 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 DIMT1Q9UNQ2 313 aaKnown RBP2.81□□□□□ -1.96
VIM-210ENST00000637053 SLC22A13Q9Y226 551 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 COA3Q9Y2R0 106 aaPredicted RBP2.81□□□□□ -1.96
VIM-210ENST00000637053 DHRS7Q9Y394 339 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 MRPS18BQ9Y676 258 aaKnown RBP2.81□□□□□ -1.96
VIM-210ENST00000637053 MROH7-TTC4A0A0A0MT08 1334 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 CCNB3Q8WWL7 1395 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 DISP3Q9P2K9 1392 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 CCDC180Q9P1Z9 1646 aa2.81□□□□□ -1.96
VIM-210ENST00000637053 RFX7Q2KHR2 1363 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms