RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 PRKAR1AP10644 381 aa11.73□□□□□ -0.53
SYNGAP1-207ENST00000628646 CD59P13987 128 aa11.73□□□□□ -0.53
SYNGAP1-207ENST00000628646 DAG1Q14118 895 aa11.73□□□□□ -0.53
SYNGAP1-207ENST00000628646 OFCC1Q8IZS5 231 aa11.73□□□□□ -0.53
SYNGAP1-207ENST00000628646 OR5AK3PQ8NH89 298 aa11.73□□□□□ -0.53
SYNGAP1-207ENST00000628646 OR5K1Q8NHB7 308 aa11.73□□□□□ -0.53
SYNGAP1-207ENST00000628646 YIPF4Q9BSR8 244 aa11.73□□□□□ -0.53
SYNGAP1-207ENST00000628646 UCK1Q9HA47 277 aa11.73□□□□□ -0.53
SYNGAP1-207ENST00000628646 MAN2B2Q9Y2E5 1009 aa11.73□□□□□ -0.53
SYNGAP1-207ENST00000628646 SCN3AQ9NY46 2000 aa11.73□□□□□ -0.53
SYNGAP1-207ENST00000628646 PRR5P85299 388 aa11.73□□□□□ -0.53
SYNGAP1-207ENST00000628646 MC1RQ01726 317 aa11.73□□□□□ -0.53
SYNGAP1-207ENST00000628646 EIF3IQ13347 325 aaKnown RBP11.73□□□□□ -0.53
SYNGAP1-207ENST00000628646 GNA13Q14344 377 aa11.73□□□□□ -0.53
SYNGAP1-207ENST00000628646 ISXQ2M1V0 245 aa11.73□□□□□ -0.53
SYNGAP1-207ENST00000628646 GPAT3Q53EU6 434 aa11.73□□□□□ -0.53
SYNGAP1-207ENST00000628646 ANKRD34AQ69YU3 496 aa11.73□□□□□ -0.53
SYNGAP1-207ENST00000628646 KRT73Q86Y46 540 aa11.73□□□□□ -0.53
SYNGAP1-207ENST00000628646 OR7A2PQ8NGA2 310 aa11.73□□□□□ -0.53
SYNGAP1-207ENST00000628646 C11orf24Q96F05 449 aaPredicted RBP11.73□□□□□ -0.53
SYNGAP1-207ENST00000628646 LIN28AQ9H9Z2 209 aaKnown RBP11.73□□□□□ -0.53
SYNGAP1-207ENST00000628646 MUC22E2RYF6 1773 aaPredicted RBP11.73□□□□□ -0.53
SYNGAP1-207ENST00000628646 CACNA1GO43497 2377 aa11.73□□□□□ -0.53
SYNGAP1-207ENST00000628646 SERTM1A2A2V5 107 aa11.73□□□□□ -0.53
SYNGAP1-207ENST00000628646 LRIT2A6NDA9 550 aa11.73□□□□□ -0.53
SYNGAP1-207ENST00000628646 FOXE1O00358 373 aaPredicted RBP11.73□□□□□ -0.53
SYNGAP1-207ENST00000628646 CREG1O75629 220 aa11.73□□□□□ -0.53
SYNGAP1-207ENST00000628646 NR2F1P10589 423 aa11.73□□□□□ -0.53
SYNGAP1-207ENST00000628646 PNLIPP16233 465 aa11.73□□□□□ -0.53
SYNGAP1-207ENST00000628646 TACR1P25103 407 aa11.73□□□□□ -0.53
SYNGAP1-207ENST00000628646 ATP5A1P25705 553 aaKnown RBP11.73□□□□□ -0.53
SYNGAP1-207ENST00000628646 SHBQ15464 509 aa11.73□□□□□ -0.53
SYNGAP1-207ENST00000628646 GARNL3Q5VVW2 1013 aa11.73□□□□□ -0.53
SYNGAP1-207ENST00000628646 ZC3H7AQ8IWR0 971 aaKnown RBP11.73□□□□□ -0.53
SYNGAP1-207ENST00000628646 EGLN2Q96KS0 407 aa11.73□□□□□ -0.53
SYNGAP1-207ENST00000628646 LPAR4Q99677 370 aa11.73□□□□□ -0.53
SYNGAP1-207ENST00000628646 SATB2Q9UPW6 733 aa11.73□□□□□ -0.53
SYNGAP1-207ENST00000628646 FAM220BPB1ANY3 271 aa11.72□□□□□ -0.53
SYNGAP1-207ENST00000628646 IL5RAQ01344 420 aa11.72□□□□□ -0.53
SYNGAP1-207ENST00000628646 ILKQ13418 452 aa11.72□□□□□ -0.53
SYNGAP1-207ENST00000628646 TOMM20Q15388 145 aa11.72□□□□□ -0.53
SYNGAP1-207ENST00000628646 SYT16Q17RD7 645 aa11.72□□□□□ -0.53
SYNGAP1-207ENST00000628646 GCNT6Q5T4J0 391 aa11.72□□□□□ -0.53
SYNGAP1-207ENST00000628646 TMEM214Q6NUQ4 689 aaKnown RBP11.72□□□□□ -0.53
SYNGAP1-207ENST00000628646 ABHD17CQ6PCB6 329 aa11.72□□□□□ -0.53
SYNGAP1-207ENST00000628646 DHRS4L2Q6PKH6 230 aa11.72□□□□□ -0.53
SYNGAP1-207ENST00000628646 C6orf15Q6UXA7 325 aaPredicted RBP11.72□□□□□ -0.53
SYNGAP1-207ENST00000628646 TMEM179BQ7Z7N9 219 aa11.72□□□□□ -0.53
SYNGAP1-207ENST00000628646 OR1L3Q8NH93 324 aa11.72□□□□□ -0.53
SYNGAP1-207ENST00000628646 MBOAT4Q96T53 435 aa11.72□□□□□ -0.53
SYNGAP1-207ENST00000628646 MAPKAP1Q9BPZ7 522 aa11.72□□□□□ -0.53
SYNGAP1-207ENST00000628646 CPPED1Q9BRF8 314 aaPredicted RBP11.72□□□□□ -0.53
SYNGAP1-207ENST00000628646 ARHGAP9Q9BRR9 750 aa11.72□□□□□ -0.53
SYNGAP1-207ENST00000628646 SPATA5L1Q9BVQ7 753 aa11.72□□□□□ -0.53
SYNGAP1-207ENST00000628646 APMAPQ9HDC9 416 aa11.72□□□□□ -0.53
SYNGAP1-207ENST00000628646 RSL24D1Q9UHA3 163 aaKnown RBP11.72□□□□□ -0.53
SYNGAP1-207ENST00000628646 NUDT14O95848 222 aa11.72□□□□□ -0.53
SYNGAP1-207ENST00000628646 GP1BAP07359 652 aa11.72□□□□□ -0.53
SYNGAP1-207ENST00000628646 CD22P20273 847 aa11.72□□□□□ -0.53
SYNGAP1-207ENST00000628646 CSF2RBP32927 897 aa11.72□□□□□ -0.53
SYNGAP1-207ENST00000628646 PTGER1P34995 402 aa11.72□□□□□ -0.53
SYNGAP1-207ENST00000628646 LSSP48449 732 aa11.72□□□□□ -0.53
SYNGAP1-207ENST00000628646 CCR4P51679 360 aa11.72□□□□□ -0.53
SYNGAP1-207ENST00000628646 ANKRD53Q8N9V6 530 aa11.72□□□□□ -0.53
SYNGAP1-207ENST00000628646 TEFMQ96QE5 360 aaKnown RBP11.72□□□□□ -0.53
SYNGAP1-207ENST00000628646 TAAR9Q96RI9 348 aa11.72□□□□□ -0.53
SYNGAP1-207ENST00000628646 ALOXE3Q9BYJ1 711 aa11.72□□□□□ -0.53
SYNGAP1-207ENST00000628646 IMPAD1Q9NX62 359 aa11.72□□□□□ -0.53
SYNGAP1-207ENST00000628646 SAMHD1Q9Y3Z3 626 aaKnown RBP11.72□□□□□ -0.53
SYNGAP1-207ENST00000628646 PCDHB14Q9Y5E9 798 aa11.72□□□□□ -0.53
SYNGAP1-207ENST00000628646 MEN1O00255 615 aa11.72□□□□□ -0.53
SYNGAP1-207ENST00000628646 CDX4O14627 284 aaPredicted RBP11.72□□□□□ -0.53
SYNGAP1-207ENST00000628646 PEBP1P30086 187 aaKnown RBP11.72□□□□□ -0.53
SYNGAP1-207ENST00000628646 CDKN2CP42773 168 aa11.72□□□□□ -0.53
SYNGAP1-207ENST00000628646 PPP2R2BQ00005 443 aa11.72□□□□□ -0.53
SYNGAP1-207ENST00000628646 BROXQ5VW32 411 aa11.72□□□□□ -0.53
SYNGAP1-207ENST00000628646 XKR5Q6UX68 686 aa11.72□□□□□ -0.53
SYNGAP1-207ENST00000628646 KAT2AQ92830 837 aa11.72□□□□□ -0.53
SYNGAP1-207ENST00000628646 TMBIM1Q969X1 311 aa11.72□□□□□ -0.53
SYNGAP1-207ENST00000628646 DTNBP1Q96EV8 351 aa11.72□□□□□ -0.53
SYNGAP1-207ENST00000628646 A0A1W2PPV9 198 aa11.72□□□□□ -0.53
SYNGAP1-207ENST00000628646 H0YAE9 185 aa11.72□□□□□ -0.53
SYNGAP1-207ENST00000628646 UGT2B11O75310 529 aa11.72□□□□□ -0.53
SYNGAP1-207ENST00000628646 TRMUO75648 421 aaKnown RBP11.72□□□□□ -0.53
SYNGAP1-207ENST00000628646 STK17BO94768 372 aa11.72□□□□□ -0.53
SYNGAP1-207ENST00000628646 SERPINA1P01009 418 aa11.72□□□□□ -0.53
SYNGAP1-207ENST00000628646 SMIM11AP58511 58 aa11.72□□□□□ -0.53
SYNGAP1-207ENST00000628646 PROX2Q3B8N5 592 aa11.72□□□□□ -0.53
SYNGAP1-207ENST00000628646 MANEAQ5SRI9 462 aa11.72□□□□□ -0.53
SYNGAP1-207ENST00000628646 FCRL6Q6DN72 434 aa11.72□□□□□ -0.53
SYNGAP1-207ENST00000628646 THAP5Q7Z6K1 395 aa11.72□□□□□ -0.53
SYNGAP1-207ENST00000628646 ZDHHC21Q8IVQ6 265 aa11.72□□□□□ -0.53
SYNGAP1-207ENST00000628646 SVOPQ8N4V2 548 aa11.72□□□□□ -0.53
SYNGAP1-207ENST00000628646 PROX1Q92786 737 aa11.72□□□□□ -0.53
SYNGAP1-207ENST00000628646 MS4A6EQ96DS6 147 aa11.72□□□□□ -0.53
SYNGAP1-207ENST00000628646 REXO5Q96IC2 774 aaKnown RBP11.72□□□□□ -0.53
SYNGAP1-207ENST00000628646 SCN2BO60939 215 aa11.71□□□□□ -0.53
SYNGAP1-207ENST00000628646 C6orf47O95873 294 aa11.71□□□□□ -0.53
SYNGAP1-207ENST00000628646 FABP3P05413 133 aa11.71□□□□□ -0.53
SYNGAP1-207ENST00000628646 FHP07954 510 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms