RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 MAPK11Q15759 364 aa8.91□□□□□ -0.98
PDLIM5-223ENST00000627587 LRRC36Q1X8D7 754 aa8.91□□□□□ -0.98
PDLIM5-223ENST00000627587 SNAP47Q5SQN1 464 aa8.91□□□□□ -0.98
PDLIM5-223ENST00000627587 TMEM164Q5U3C3 297 aa8.91□□□□□ -0.98
PDLIM5-223ENST00000627587 GARNL3Q5VVW2 1013 aa8.91□□□□□ -0.98
PDLIM5-223ENST00000627587 PRSS42Q7Z5A4 293 aa8.91□□□□□ -0.98
PDLIM5-223ENST00000627587 KMT5CQ86Y97 462 aa8.91□□□□□ -0.98
PDLIM5-223ENST00000627587 TMEM126BQ8IUX1 230 aa8.91□□□□□ -0.98
PDLIM5-223ENST00000627587 CCDC116Q8IYX3 515 aa8.91□□□□□ -0.98
PDLIM5-223ENST00000627587 CA13Q8N1Q1 262 aa8.91□□□□□ -0.98
PDLIM5-223ENST00000627587 EXD3Q8N9H8 876 aa8.91□□□□□ -0.98
PDLIM5-223ENST00000627587 TTC29Q8NA56 475 aaPredicted RBP8.91□□□□□ -0.98
PDLIM5-223ENST00000627587 C11orf65Q8NCR3 313 aa8.91□□□□□ -0.98
PDLIM5-223ENST00000627587 SLC41A2Q96JW4 573 aa8.91□□□□□ -0.98
PDLIM5-223ENST00000627587 CMKLR1Q99788 373 aa8.91□□□□□ -0.98
PDLIM5-223ENST00000627587 RSPO3Q9BXY4 272 aaPredicted RBP8.91□□□□□ -0.98
PDLIM5-223ENST00000627587 ANKRA2Q9H9E1 313 aa8.91□□□□□ -0.98
PDLIM5-223ENST00000627587 AGPAT4Q9NRZ5 378 aa8.91□□□□□ -0.98
PDLIM5-223ENST00000627587 SEMA3GQ9NS98 782 aa8.91□□□□□ -0.98
PDLIM5-223ENST00000627587 MAP4K5Q9Y4K4 846 aa8.91□□□□□ -0.98
PDLIM5-223ENST00000627587 V9GYQ6 96 aa8.91□□□□□ -0.98
PDLIM5-223ENST00000627587 PRAMEF27A3QJZ7 478 aa8.9□□□□□ -0.98
PDLIM5-223ENST00000627587 RDH16O75452 317 aa8.9□□□□□ -0.98
PDLIM5-223ENST00000627587 MT-ND1P03886 318 aa8.9□□□□□ -0.98
PDLIM5-223ENST00000627587 FCGR1AP12314 374 aa8.9□□□□□ -0.98
PDLIM5-223ENST00000627587 CCT3P49368 545 aaKnown RBP8.9□□□□□ -0.98
PDLIM5-223ENST00000627587 PRIM2P49643 509 aa8.9□□□□□ -0.98
PDLIM5-223ENST00000627587 ZFP36L1Q07352 338 aaKnown RBP8.9□□□□□ -0.98
PDLIM5-223ENST00000627587 RBBP4Q09028 425 aa8.9□□□□□ -0.98
PDLIM5-223ENST00000627587 SQSTM1Q13501 440 aa8.9□□□□□ -0.98
PDLIM5-223ENST00000627587 GRM7Q14831 915 aa8.9□□□□□ -0.98
PDLIM5-223ENST00000627587 LTB4RQ15722 352 aa8.9□□□□□ -0.98
PDLIM5-223ENST00000627587 GPR19Q15760 415 aa8.9□□□□□ -0.98
PDLIM5-223ENST00000627587 LINC00303Q3SY05 128 aa8.9□□□□□ -0.98
PDLIM5-223ENST00000627587 FAM98BQ52LJ0 330 aaKnown RBP8.9□□□□□ -0.98
PDLIM5-223ENST00000627587 TMTC4Q5T4D3 741 aa8.9□□□□□ -0.98
PDLIM5-223ENST00000627587 GCNT6Q5T4J0 391 aa8.9□□□□□ -0.98
PDLIM5-223ENST00000627587 BHLHB9Q6PI77 547 aa8.9□□□□□ -0.98
PDLIM5-223ENST00000627587 TMEM64Q6YI46 380 aa8.9□□□□□ -0.98
PDLIM5-223ENST00000627587 PRICKLE2Q7Z3G6 844 aa8.9□□□□□ -0.98
PDLIM5-223ENST00000627587 SZRD1Q7Z422 152 aa8.9□□□□□ -0.98
PDLIM5-223ENST00000627587 AMIGO2Q86SJ2 522 aa8.9□□□□□ -0.98
PDLIM5-223ENST00000627587 OR4N5Q8IXE1 308 aa8.9□□□□□ -0.98
PDLIM5-223ENST00000627587 HORMAD2Q8N7B1 307 aa8.9□□□□□ -0.98
PDLIM5-223ENST00000627587 SIMC1Q8NDZ2 872 aa8.9□□□□□ -0.98
PDLIM5-223ENST00000627587 OR4K14Q8NGD5 310 aa8.9□□□□□ -0.98
PDLIM5-223ENST00000627587 OR10Q1Q8NGQ4 319 aa8.9□□□□□ -0.98
PDLIM5-223ENST00000627587 FBXO30Q8TB52 745 aa8.9□□□□□ -0.98
PDLIM5-223ENST00000627587 SEPHS2Q99611 448 aa8.9□□□□□ -0.98
PDLIM5-223ENST00000627587 UGT2B28Q9BY64 529 aa8.9□□□□□ -0.98
PDLIM5-223ENST00000627587 SPRTNQ9H040 489 aaPredicted RBP8.9□□□□□ -0.98
PDLIM5-223ENST00000627587 TMEM38AQ9H6F2 299 aa8.9□□□□□ -0.98
PDLIM5-223ENST00000627587 OLAHQ9NV23 265 aa8.9□□□□□ -0.98
PDLIM5-223ENST00000627587 C15orf41Q9Y2V0 281 aa8.9□□□□□ -0.98
PDLIM5-223ENST00000627587 LRRC42Q9Y546 428 aa8.9□□□□□ -0.98
PDLIM5-223ENST00000627587 CLDN16Q9Y5I7 305 aa8.9□□□□□ -0.98
PDLIM5-223ENST00000627587 NINQ8N4C6 2090 aa8.9□□□□□ -0.98
PDLIM5-223ENST00000627587 MYO18BQ8IUG5 2567 aa8.9□□□□□ -0.98
PDLIM5-223ENST00000627587 A0A0A6YYC8 382 aaPredicted RBP8.89□□□□□ -0.99
PDLIM5-223ENST00000627587 HYKKA2RU49 373 aa8.89□□□□□ -0.99
PDLIM5-223ENST00000627587 TGFBR3LH3BV60 316 aa8.89□□□□□ -0.99
PDLIM5-223ENST00000627587 I3L1I5 382 aaPredicted RBP8.89□□□□□ -0.99
PDLIM5-223ENST00000627587 TOX3O15405 576 aaPredicted RBP8.89□□□□□ -0.99
PDLIM5-223ENST00000627587 FGF17O60258 216 aa8.89□□□□□ -0.99
PDLIM5-223ENST00000627587 TPST1O60507 370 aa8.89□□□□□ -0.99
PDLIM5-223ENST00000627587 PRKD3O94806 890 aa8.89□□□□□ -0.99
PDLIM5-223ENST00000627587 NSA2O95478 260 aaKnown RBP8.89□□□□□ -0.99
PDLIM5-223ENST00000627587 SERPINA1P01009 418 aa8.89□□□□□ -0.99
PDLIM5-223ENST00000627587 SEMG1P04279 462 aa8.89□□□□□ -0.99
PDLIM5-223ENST00000627587 FOLR1P15328 257 aa8.89□□□□□ -0.99
PDLIM5-223ENST00000627587 FASP25445 335 aa8.89□□□□□ -0.99
PDLIM5-223ENST00000627587 PCGF2P35227 344 aa8.89□□□□□ -0.99
PDLIM5-223ENST00000627587 XKP51811 444 aa8.89□□□□□ -0.99
PDLIM5-223ENST00000627587 RAB38P57729 211 aa8.89□□□□□ -0.99
PDLIM5-223ENST00000627587 DSTNP60981 165 aa8.89□□□□□ -0.99
PDLIM5-223ENST00000627587 CHRNB3Q05901 458 aa8.89□□□□□ -0.99
PDLIM5-223ENST00000627587 NFATC3Q12968 1075 aa8.89□□□□□ -0.99
PDLIM5-223ENST00000627587 TP53BP2Q13625 1128 aa8.89□□□□□ -0.99
PDLIM5-223ENST00000627587 LRRC23Q53EV4 343 aaPredicted RBP8.89□□□□□ -0.99
PDLIM5-223ENST00000627587 SFT2D3Q587I9 215 aa8.89□□□□□ -0.99
PDLIM5-223ENST00000627587 TMEM71Q6P5X7 295 aa8.89□□□□□ -0.99
PDLIM5-223ENST00000627587 C6orf120Q7Z4R8 191 aa8.89□□□□□ -0.99
PDLIM5-223ENST00000627587 EPHX4Q8IUS5 362 aa8.89□□□□□ -0.99
PDLIM5-223ENST00000627587 EID3Q8N140 333 aa8.89□□□□□ -0.99
PDLIM5-223ENST00000627587 LRRC25Q8N386 305 aaPredicted RBP8.89□□□□□ -0.99
PDLIM5-223ENST00000627587 D2HGDHQ8N465 521 aa8.89□□□□□ -0.99
PDLIM5-223ENST00000627587 OR9A2Q8NGT5 310 aa8.89□□□□□ -0.99
PDLIM5-223ENST00000627587 SFXN5Q8TD22 340 aa8.89□□□□□ -0.99
PDLIM5-223ENST00000627587 MOAP1Q96BY2 351 aa8.89□□□□□ -0.99
PDLIM5-223ENST00000627587 TBC1D20Q96BZ9 403 aa8.89□□□□□ -0.99
PDLIM5-223ENST00000627587 RNF145Q96MT1 663 aa8.89□□□□□ -0.99
PDLIM5-223ENST00000627587 SEMA6AQ9H2E6 1030 aa8.89□□□□□ -0.99
PDLIM5-223ENST00000627587 YY1AP1Q9H869 796 aa8.89□□□□□ -0.99
PDLIM5-223ENST00000627587 ZCCHC3Q9NUD5 404 aaKnown RBP8.89□□□□□ -0.99
PDLIM5-223ENST00000627587 PDP2Q9P2J9 529 aa8.89□□□□□ -0.99
PDLIM5-223ENST00000627587 SAMD4AQ9UPU9 718 aaKnown RBP8.89□□□□□ -0.99
PDLIM5-223ENST00000627587 LOXL2Q9Y4K0 774 aa8.89□□□□□ -0.99
PDLIM5-223ENST00000627587 KIF26BQ2KJY2 2108 aa8.89□□□□□ -0.99
PDLIM5-223ENST00000627587 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.89□□□□□ -0.99
PDLIM5-223ENST00000627587 A8MU76 341 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms