RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 OR7D2Q96RA2 312 aa18.55■□□□□ 0.56
PCDHB11-202ENST00000624887 BCL7BQ9BQE9 202 aa18.55■□□□□ 0.56
PCDHB11-202ENST00000624887 NDRG2Q9UN36 371 aaKnown RBP18.55■□□□□ 0.56
PCDHB11-202ENST00000624887 DSPPQ9NZW4 1301 aa18.54■□□□□ 0.56
PCDHB11-202ENST00000624887 ZAR1LA6NP61 321 aa18.54■□□□□ 0.56
PCDHB11-202ENST00000624887 C2orf74A8MZ97 194 aa18.54■□□□□ 0.56
PCDHB11-202ENST00000624887 FAM227AF5H4B4 570 aa18.54■□□□□ 0.56
PCDHB11-202ENST00000624887 MAN1A2O60476 641 aa18.54■□□□□ 0.56
PCDHB11-202ENST00000624887 FADS2O95864 444 aaKnown RBP18.54■□□□□ 0.56
PCDHB11-202ENST00000624887 CPN2P22792 545 aa18.54■□□□□ 0.56
PCDHB11-202ENST00000624887 CHMP24386 653 aa18.54■□□□□ 0.56
PCDHB11-202ENST00000624887 MAN2A2P49641 1150 aa18.54■□□□□ 0.56
PCDHB11-202ENST00000624887 DGKEP52429 567 aa18.54■□□□□ 0.56
PCDHB11-202ENST00000624887 CRISP1P54107 249 aa18.54■□□□□ 0.56
PCDHB11-202ENST00000624887 EIF2B5Q13144 721 aaKnown RBP18.54■□□□□ 0.56
PCDHB11-202ENST00000624887 FRMPD2BQ6IN97 320 aa18.54■□□□□ 0.56
PCDHB11-202ENST00000624887 Q6ZS52 159 aa18.54■□□□□ 0.56
PCDHB11-202ENST00000624887 OLIG3Q7RTU3 272 aa18.54■□□□□ 0.56
PCDHB11-202ENST00000624887 CAMKVQ8NCB2 501 aa18.54■□□□□ 0.56
PCDHB11-202ENST00000624887 ZFYVE21Q9BQ24 234 aa18.54■□□□□ 0.56
PCDHB11-202ENST00000624887 FUZQ9BT04 418 aa18.54■□□□□ 0.56
PCDHB11-202ENST00000624887 COPS4Q9BT78 406 aa18.54■□□□□ 0.56
PCDHB11-202ENST00000624887 FKBP14Q9NWM8 211 aa18.54■□□□□ 0.56
PCDHB11-202ENST00000624887 IMPAD1Q9NX62 359 aa18.54■□□□□ 0.56
PCDHB11-202ENST00000624887 A4GNTQ9UNA3 340 aa18.54■□□□□ 0.56
PCDHB11-202ENST00000624887 CYP8B1Q9UNU6 501 aa18.54■□□□□ 0.56
PCDHB11-202ENST00000624887 MGAT4BQ9UQ53 548 aa18.54■□□□□ 0.56
PCDHB11-202ENST00000624887 SLC9A8Q9Y2E8 581 aa18.54■□□□□ 0.56
PCDHB11-202ENST00000624887 KIR2DS5A0A0G2JLQ3 304 aa18.53■□□□□ 0.56
PCDHB11-202ENST00000624887 A0A0G2JNG1 304 aa18.53■□□□□ 0.56
PCDHB11-202ENST00000624887 SPTY2D1-AS1A0A0U1RR47 76 aa18.53■□□□□ 0.56
PCDHB11-202ENST00000624887 OR5K4A6NMS3 321 aa18.53■□□□□ 0.56
PCDHB11-202ENST00000624887 KIR2DS3K7RE56 304 aa18.53■□□□□ 0.56
PCDHB11-202ENST00000624887 CASC3O15234 703 aaKnown RBP18.53■□□□□ 0.56
PCDHB11-202ENST00000624887 BCAS1O75363 584 aaPredicted RBP18.53■□□□□ 0.56
PCDHB11-202ENST00000624887 EPPINO95925 133 aa18.53■□□□□ 0.56
PCDHB11-202ENST00000624887 LGI1O95970 557 aa18.53■□□□□ 0.56
PCDHB11-202ENST00000624887 BCL10O95999 233 aa18.53■□□□□ 0.56
PCDHB11-202ENST00000624887 KIR2DS5Q14953 304 aa18.53■□□□□ 0.56
PCDHB11-202ENST00000624887 CTF1Q16619 201 aa18.53■□□□□ 0.56
PCDHB11-202ENST00000624887 DEFB134Q4QY38 66 aa18.53■□□□□ 0.56
PCDHB11-202ENST00000624887 GPAT3Q53EU6 434 aa18.53■□□□□ 0.56
PCDHB11-202ENST00000624887 SAMD14Q8IZD0 417 aaPredicted RBP18.53■□□□□ 0.56
PCDHB11-202ENST00000624887 ZCCHC10Q8TBK6 192 aa18.53■□□□□ 0.56
PCDHB11-202ENST00000624887 TBC1D15Q8TC07 691 aa18.53■□□□□ 0.56
PCDHB11-202ENST00000624887 TANKQ92844 425 aa18.53■□□□□ 0.56
PCDHB11-202ENST00000624887 YIPF6Q96EC8 236 aa18.53■□□□□ 0.56
PCDHB11-202ENST00000624887 PRDM9Q9NQV7 894 aa18.53■□□□□ 0.56
PCDHB11-202ENST00000624887 KCNE3Q9Y6H6 103 aa18.53■□□□□ 0.56
PCDHB11-202ENST00000624887 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.53■□□□□ 0.56
PCDHB11-202ENST00000624887 CLCA1A8K7I4 914 aa18.53■□□□□ 0.56
PCDHB11-202ENST00000624887 M0R3H8 397 aa18.53■□□□□ 0.56
PCDHB11-202ENST00000624887 B3GALT2O43825 422 aa18.53■□□□□ 0.56
PCDHB11-202ENST00000624887 GABARAPO95166 117 aa18.53■□□□□ 0.56
PCDHB11-202ENST00000624887 CTSKP43235 329 aa18.53■□□□□ 0.56
PCDHB11-202ENST00000624887 CDC42P60953 191 aa18.53■□□□□ 0.56
PCDHB11-202ENST00000624887 AQP6Q13520 282 aa18.53■□□□□ 0.56
PCDHB11-202ENST00000624887 RUNX2Q13950 521 aa18.53■□□□□ 0.56
PCDHB11-202ENST00000624887 LTB4RQ15722 352 aa18.53■□□□□ 0.56
PCDHB11-202ENST00000624887 ABHD13Q7L211 337 aa18.53■□□□□ 0.56
PCDHB11-202ENST00000624887 LRRC25Q8N386 305 aaPredicted RBP18.53■□□□□ 0.56
PCDHB11-202ENST00000624887 KAT2AQ92830 837 aa18.53■□□□□ 0.56
PCDHB11-202ENST00000624887 MYDGFQ969H8 173 aa18.53■□□□□ 0.56
PCDHB11-202ENST00000624887 GIMAP5Q96F15 307 aa18.53■□□□□ 0.56
PCDHB11-202ENST00000624887 UCK2Q9BZX2 261 aa18.53■□□□□ 0.56
PCDHB11-202ENST00000624887 KLHL25Q9H0H3 589 aa18.53■□□□□ 0.56
PCDHB11-202ENST00000624887 GPR27Q9NS67 375 aa18.53■□□□□ 0.56
PCDHB11-202ENST00000624887 GALNT8Q9NY28 637 aa18.53■□□□□ 0.56
PCDHB11-202ENST00000624887 NTMQ9P121 344 aa18.53■□□□□ 0.56
PCDHB11-202ENST00000624887 DAPP1Q9UN19 280 aa18.53■□□□□ 0.56
PCDHB11-202ENST00000624887 DUSP12Q9UNI6 340 aa18.53■□□□□ 0.56
PCDHB11-202ENST00000624887 LIPT1Q9Y234 373 aa18.53■□□□□ 0.56
PCDHB11-202ENST00000624887 LOC105369274A0A096LPK9 316 aa18.52■□□□□ 0.56
PCDHB11-202ENST00000624887 LOC102723532A0A0G2JNH3 316 aa18.52■□□□□ 0.56
PCDHB11-202ENST00000624887 A0A1W2PRQ8 180 aa18.52■□□□□ 0.56
PCDHB11-202ENST00000624887 OR10H3O60404 316 aa18.52■□□□□ 0.56
PCDHB11-202ENST00000624887 UGT2B17O75795 530 aa18.52■□□□□ 0.56
PCDHB11-202ENST00000624887 OSMP13725 252 aa18.52■□□□□ 0.56
PCDHB11-202ENST00000624887 ZNF10P21506 573 aaPredicted RBP18.52■□□□□ 0.56
PCDHB11-202ENST00000624887 ST13P50502 369 aaKnown RBP18.52■□□□□ 0.56
PCDHB11-202ENST00000624887 EMP3P54852 163 aa18.52■□□□□ 0.56
PCDHB11-202ENST00000624887 BNIP3Q12983 259 aa18.52■□□□□ 0.56
PCDHB11-202ENST00000624887 PIN1Q13526 163 aaPredicted RBP18.52■□□□□ 0.56
PCDHB11-202ENST00000624887 DGCR6Q14129 220 aa18.52■□□□□ 0.56
PCDHB11-202ENST00000624887 SMAD2Q15796 467 aaKnown RBP18.52■□□□□ 0.56
PCDHB11-202ENST00000624887 OR4N4Q8N0Y3 316 aa18.52■□□□□ 0.56
PCDHB11-202ENST00000624887 BAHD1Q8TBE0 780 aaPredicted RBP18.52■□□□□ 0.56
PCDHB11-202ENST00000624887 SLC7A13Q8TCU3 470 aa18.52■□□□□ 0.56
PCDHB11-202ENST00000624887 SLC37A2Q8TED4 501 aa18.52■□□□□ 0.56
PCDHB11-202ENST00000624887 RSC1A1Q92681 617 aa18.52■□□□□ 0.56
PCDHB11-202ENST00000624887 GGHQ92820 318 aa18.52■□□□□ 0.56
PCDHB11-202ENST00000624887 PINK1Q9BXM7 581 aa18.52■□□□□ 0.56
PCDHB11-202ENST00000624887 ACTRT3Q9BYD9 372 aa18.52■□□□□ 0.56
PCDHB11-202ENST00000624887 ANKRA2Q9H9E1 313 aa18.52■□□□□ 0.56
PCDHB11-202ENST00000624887 EQTNQ9NQ60 294 aa18.52■□□□□ 0.56
PCDHB11-202ENST00000624887 EVA1BQ9NVM1 165 aa18.52■□□□□ 0.56
PCDHB11-202ENST00000624887 CHCHD3Q9NX63 227 aaKnown RBP18.52■□□□□ 0.56
PCDHB11-202ENST00000624887 MS4A12Q9NXJ0 267 aa18.52■□□□□ 0.56
PCDHB11-202ENST00000624887 REV1Q9UBZ9 1251 aa18.52■□□□□ 0.56
PCDHB11-202ENST00000624887 CELA2BP08218 269 aaPredicted RBP18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms