RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 PIM3Q86V86 326 aa7.52□□□□□ -1.21
VPS11-209ENST00000622309 C1orf52Q8N6N3 182 aaKnown RBP7.52□□□□□ -1.21
VPS11-209ENST00000622309 PXT1Q8NFP0 134 aa7.52□□□□□ -1.21
VPS11-209ENST00000622309 SLC22A18Q96BI1 424 aa7.52□□□□□ -1.21
VPS11-209ENST00000622309 CCDC74BQ96LY2 380 aa7.52□□□□□ -1.21
VPS11-209ENST00000622309 CLUHP3Q96NS8 147 aa7.52□□□□□ -1.21
VPS11-209ENST00000622309 SOSTQ9BQB4 213 aa7.52□□□□□ -1.21
VPS11-209ENST00000622309 DPY30Q9C005 99 aa7.52□□□□□ -1.21
VPS11-209ENST00000622309 ABHD16BQ9H3Z7 469 aa7.52□□□□□ -1.21
VPS11-209ENST00000622309 SLC25A37Q9NYZ2 338 aa7.52□□□□□ -1.21
VPS11-209ENST00000622309 MARK1Q9P0L2 795 aa7.52□□□□□ -1.21
VPS11-209ENST00000622309 H2AFY2Q9P0M6 372 aaPredicted RBP7.52□□□□□ -1.21
VPS11-209ENST00000622309 EXTL2Q9UBQ6 330 aa7.52□□□□□ -1.21
VPS11-209ENST00000622309 UBQLN1Q9UMX0 589 aaKnown RBP7.52□□□□□ -1.21
VPS11-209ENST00000622309 CRYL1Q9Y2S2 319 aa7.52□□□□□ -1.21
VPS11-209ENST00000622309 OR6C68A6NDL8 312 aa7.52□□□□□ -1.21
VPS11-209ENST00000622309 GPR31O00270 319 aa7.52□□□□□ -1.21
VPS11-209ENST00000622309 CILPO75339 1184 aa7.52□□□□□ -1.21
VPS11-209ENST00000622309 PAK4O96013 591 aaPredicted RBP7.52□□□□□ -1.21
VPS11-209ENST00000622309 EGFP01133 1207 aa7.52□□□□□ -1.21
VPS11-209ENST00000622309 CBSLP0DN79 551 aa7.52□□□□□ -1.21
VPS11-209ENST00000622309 PF4V1P10720 104 aa7.52□□□□□ -1.21
VPS11-209ENST00000622309 CSF2RAP15509 400 aa7.52□□□□□ -1.21
VPS11-209ENST00000622309 HLA-DPA1P20036 260 aa7.52□□□□□ -1.21
VPS11-209ENST00000622309 PRDX3P30048 256 aaKnown RBP7.52□□□□□ -1.21
VPS11-209ENST00000622309 SLC6A4P31645 630 aa7.52□□□□□ -1.21
VPS11-209ENST00000622309 S100A11P31949 105 aa7.52□□□□□ -1.21
VPS11-209ENST00000622309 CBSP35520 551 aa7.52□□□□□ -1.21
VPS11-209ENST00000622309 ETV5P41161 510 aa7.52□□□□□ -1.21
VPS11-209ENST00000622309 MLLT11Q13015 90 aaPredicted RBP7.52□□□□□ -1.21
VPS11-209ENST00000622309 HLXQ14774 488 aaPredicted RBP7.52□□□□□ -1.21
VPS11-209ENST00000622309 TMEM44Q2T9K0 475 aa7.52□□□□□ -1.21
VPS11-209ENST00000622309 B3GNTL1Q67FW5 361 aaPredicted RBP7.52□□□□□ -1.21
VPS11-209ENST00000622309 ELP2Q6IA86 826 aa7.52□□□□□ -1.21
VPS11-209ENST00000622309 ZNF613Q6PF04 617 aa7.52□□□□□ -1.21
VPS11-209ENST00000622309 IL27RAQ6UWB1 636 aa7.52□□□□□ -1.21
VPS11-209ENST00000622309 USP30Q70CQ3 517 aa7.52□□□□□ -1.21
VPS11-209ENST00000622309 LDLRAD3Q86YD5 345 aa7.52□□□□□ -1.21
VPS11-209ENST00000622309 ADGRG2Q8IZP9 1017 aa7.52□□□□□ -1.21
VPS11-209ENST00000622309 L3MBTL4Q8NA19 623 aa7.52□□□□□ -1.21
VPS11-209ENST00000622309 CNOT9Q92600 299 aaKnown RBP7.52□□□□□ -1.21
VPS11-209ENST00000622309 ART5Q96L15 291 aa7.52□□□□□ -1.21
VPS11-209ENST00000622309 OR52E6Q96RD3 313 aa7.52□□□□□ -1.21
VPS11-209ENST00000622309 PKP4Q99569 1192 aa7.52□□□□□ -1.21
VPS11-209ENST00000622309 SARGQ9BW04 601 aa7.52□□□□□ -1.21
VPS11-209ENST00000622309 CACNG6Q9BXT2 260 aa7.52□□□□□ -1.21
VPS11-209ENST00000622309 CPEB1Q9BZB8 566 aaKnown RBP7.52□□□□□ -1.21
VPS11-209ENST00000622309 ARL6Q9H0F7 186 aa7.52□□□□□ -1.21
VPS11-209ENST00000622309 HEBP1Q9NRV9 189 aa7.52□□□□□ -1.21
VPS11-209ENST00000622309 POFUT2Q9Y2G5 429 aa7.52□□□□□ -1.21
VPS11-209ENST00000622309 AAR2Q9Y312 384 aaKnown RBP7.52□□□□□ -1.21
VPS11-209ENST00000622309 POLR2AP24928 1970 aaKnown RBP7.52□□□□□ -1.21
VPS11-209ENST00000622309 TNFRSF11BO00300 401 aa7.51□□□□□ -1.21
VPS11-209ENST00000622309 VEGFDO43915 354 aa7.51□□□□□ -1.21
VPS11-209ENST00000622309 MPZL2O60487 215 aa7.51□□□□□ -1.21
VPS11-209ENST00000622309 ULK1O75385 1050 aa7.51□□□□□ -1.21
VPS11-209ENST00000622309 MLYCDO95822 493 aa7.51□□□□□ -1.21
VPS11-209ENST00000622309 NUDT7P0C024 238 aa7.51□□□□□ -1.21
VPS11-209ENST00000622309 CD1DP15813 335 aa7.51□□□□□ -1.21
VPS11-209ENST00000622309 LAP3P28838 519 aa7.51□□□□□ -1.21
VPS11-209ENST00000622309 SELENOPP49908 381 aa7.51□□□□□ -1.21
VPS11-209ENST00000622309 CDKN2DP55273 166 aa7.51□□□□□ -1.21
VPS11-209ENST00000622309 SLC26A5P58743 744 aa7.51□□□□□ -1.21
VPS11-209ENST00000622309 TAS2R60P59551 318 aa7.51□□□□□ -1.21
VPS11-209ENST00000622309 ITKQ08881 620 aa7.51□□□□□ -1.21
VPS11-209ENST00000622309 PIN1Q13526 163 aaPredicted RBP7.51□□□□□ -1.21
VPS11-209ENST00000622309 PAFAH1B3Q15102 231 aaKnown RBP7.51□□□□□ -1.21
VPS11-209ENST00000622309 FAM109BQ6ICB4 259 aaPredicted RBP7.51□□□□□ -1.21
VPS11-209ENST00000622309 KIAA0930Q6ICG6 404 aaPredicted RBP7.51□□□□□ -1.21
VPS11-209ENST00000622309 TMEM207Q6UWW9 146 aa7.51□□□□□ -1.21
VPS11-209ENST00000622309 NAA40Q86UY6 237 aa7.51□□□□□ -1.21
VPS11-209ENST00000622309 SERINC5Q86VE9 423 aa7.51□□□□□ -1.21
VPS11-209ENST00000622309 LAPTM4BQ86VI4 370 aa7.51□□□□□ -1.21
VPS11-209ENST00000622309 SERPINA12Q8IW75 414 aa7.51□□□□□ -1.21
VPS11-209ENST00000622309 OR10G2Q8NGC3 310 aa7.51□□□□□ -1.21
VPS11-209ENST00000622309 PIH1D2Q8WWB5 315 aa7.51□□□□□ -1.21
VPS11-209ENST00000622309 TM9SF4Q92544 642 aa7.51□□□□□ -1.21
VPS11-209ENST00000622309 HSH2DQ96JZ2 352 aa7.51□□□□□ -1.21
VPS11-209ENST00000622309 HBEGFQ99075 208 aa7.51□□□□□ -1.21
VPS11-209ENST00000622309 EPYCQ99645 322 aa7.51□□□□□ -1.21
VPS11-209ENST00000622309 FICDQ9BVA6 458 aa7.51□□□□□ -1.21
VPS11-209ENST00000622309 GSDMCQ9BYG8 508 aa7.51□□□□□ -1.21
VPS11-209ENST00000622309 ALX4Q9H161 411 aaPredicted RBP7.51□□□□□ -1.21
VPS11-209ENST00000622309 ELP3Q9H9T3 547 aa7.51□□□□□ -1.21
VPS11-209ENST00000622309 SLC6A20Q9NP91 592 aa7.51□□□□□ -1.21
VPS11-209ENST00000622309 ZNF879B4DU55 563 aa7.51□□□□□ -1.21
VPS11-209ENST00000622309 MID1O15344 667 aa7.51□□□□□ -1.21
VPS11-209ENST00000622309 GPR37L1O60883 481 aa7.51□□□□□ -1.21
VPS11-209ENST00000622309 PIGRP01833 764 aa7.51□□□□□ -1.21
VPS11-209ENST00000622309 VTNP04004 478 aa7.51□□□□□ -1.21
VPS11-209ENST00000622309 ADRA2AP08913 450 aa7.51□□□□□ -1.21
VPS11-209ENST00000622309 ANXA8P13928 327 aa7.51□□□□□ -1.21
VPS11-209ENST00000622309 PPP3CBP16298 524 aa7.51□□□□□ -1.21
VPS11-209ENST00000622309 GIFP27352 417 aa7.51□□□□□ -1.21
VPS11-209ENST00000622309 VIPR1P32241 457 aa7.51□□□□□ -1.21
VPS11-209ENST00000622309 FKBP1BP68106 108 aa7.51□□□□□ -1.21
VPS11-209ENST00000622309 ABHD18Q0P651 414 aa7.51□□□□□ -1.21
VPS11-209ENST00000622309 VGLL4Q14135 290 aa7.51□□□□□ -1.21
VPS11-209ENST00000622309 DOC2BQ14184 412 aa7.51□□□□□ -1.21
VPS11-209ENST00000622309 HABP2Q14520 560 aaPredicted RBP7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms