RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 TM7SF3Q9NS93 570 aa9.07□□□□□ -0.96
IGHV3-54-201ENST00000622166 ZCCHC3Q9NUD5 404 aaKnown RBP9.07□□□□□ -0.96
IGHV3-54-201ENST00000622166 OBP2AQ9NY56 170 aa9.07□□□□□ -0.96
IGHV3-54-201ENST00000622166 TVP23BQ9NYZ1 205 aa9.07□□□□□ -0.96
IGHV3-54-201ENST00000622166 C5AR2Q9P296 337 aa9.07□□□□□ -0.96
IGHV3-54-201ENST00000622166 TRPC4Q9UBN4 977 aa9.07□□□□□ -0.96
IGHV3-54-201ENST00000622166 FBXW2Q9UKT8 454 aa9.07□□□□□ -0.96
IGHV3-54-201ENST00000622166 CAB39Q9Y376 341 aaPredicted RBP9.07□□□□□ -0.96
IGHV3-54-201ENST00000622166 V9GYH0 126 aa9.07□□□□□ -0.96
IGHV3-54-201ENST00000622166 IGKV1-8A0A0C4DH67 115 aa9.06□□□□□ -0.96
IGHV3-54-201ENST00000622166 TMEM129A0AVI4 362 aa9.06□□□□□ -0.96
IGHV3-54-201ENST00000622166 OTOL1A6NHN0 477 aaPredicted RBP9.06□□□□□ -0.96
IGHV3-54-201ENST00000622166 KDM4EB2RXH2 506 aaPredicted RBP9.06□□□□□ -0.96
IGHV3-54-201ENST00000622166 H3BQ06 376 aaPredicted RBP9.06□□□□□ -0.96
IGHV3-54-201ENST00000622166 M0R3H8 397 aa9.06□□□□□ -0.96
IGHV3-54-201ENST00000622166 MYL12BO14950 172 aa9.06□□□□□ -0.96
IGHV3-54-201ENST00000622166 SEC14L5O43304 696 aa9.06□□□□□ -0.96
IGHV3-54-201ENST00000622166 EMC8O43402 210 aa9.06□□□□□ -0.96
IGHV3-54-201ENST00000622166 COQ9O75208 318 aa9.06□□□□□ -0.96
IGHV3-54-201ENST00000622166 EPHX1P07099 455 aa9.06□□□□□ -0.96
IGHV3-54-201ENST00000622166 GAAP10253 952 aa9.06□□□□□ -0.96
IGHV3-54-201ENST00000622166 ACP2P11117 423 aa9.06□□□□□ -0.96
IGHV3-54-201ENST00000622166 ATP5A1P25705 553 aaKnown RBP9.06□□□□□ -0.96
IGHV3-54-201ENST00000622166 GPC1P35052 558 aa9.06□□□□□ -0.96
IGHV3-54-201ENST00000622166 DRD3P35462 400 aa9.06□□□□□ -0.96
IGHV3-54-201ENST00000622166 AHRP35869 848 aa9.06□□□□□ -0.96
IGHV3-54-201ENST00000622166 TRIM23P36406 574 aa9.06□□□□□ -0.96
IGHV3-54-201ENST00000622166 IFNGR2P38484 337 aa9.06□□□□□ -0.96
IGHV3-54-201ENST00000622166 SOX3P41225 446 aa9.06□□□□□ -0.96
IGHV3-54-201ENST00000622166 IL12RB1P42701 662 aa9.06□□□□□ -0.96
IGHV3-54-201ENST00000622166 RAB28P51157 221 aa9.06□□□□□ -0.96
IGHV3-54-201ENST00000622166 NCBP2P52298 156 aaKnown RBP eCLIP9.06□□□□□ -0.96
IGHV3-54-201ENST00000622166 DGKEP52429 567 aa9.06□□□□□ -0.96
IGHV3-54-201ENST00000622166 SMSP52788 366 aa9.06□□□□□ -0.96
IGHV3-54-201ENST00000622166 HYAL2Q12891 473 aa9.06□□□□□ -0.96
IGHV3-54-201ENST00000622166 PIN1Q13526 163 aaPredicted RBP9.06□□□□□ -0.96
IGHV3-54-201ENST00000622166 SLC9A5Q14940 896 aa9.06□□□□□ -0.96
IGHV3-54-201ENST00000622166 CEBPEQ15744 281 aa9.06□□□□□ -0.96
IGHV3-54-201ENST00000622166 MLF2Q15773 248 aaPredicted RBP9.06□□□□□ -0.96
IGHV3-54-201ENST00000622166 FAM78AQ5JUQ0 283 aa9.06□□□□□ -0.96
IGHV3-54-201ENST00000622166 AGAP6Q5VW22 663 aa9.06□□□□□ -0.96
IGHV3-54-201ENST00000622166 ACSM5Q6NUN0 579 aa9.06□□□□□ -0.96
IGHV3-54-201ENST00000622166 ABHD17CQ6PCB6 329 aa9.06□□□□□ -0.96
IGHV3-54-201ENST00000622166 SLC36A4Q6YBV0 504 aa9.06□□□□□ -0.96
IGHV3-54-201ENST00000622166 HSDL2Q6YN16 418 aa9.06□□□□□ -0.96
IGHV3-54-201ENST00000622166 TMPRSS11AQ6ZMR5 421 aa9.06□□□□□ -0.96
IGHV3-54-201ENST00000622166 PRR23CQ6ZRP0 262 aa9.06□□□□□ -0.96
IGHV3-54-201ENST00000622166 IQCHQ86VS3 1027 aa9.06□□□□□ -0.96
IGHV3-54-201ENST00000622166 KIF18BQ86Y91 864 aa9.06□□□□□ -0.96
IGHV3-54-201ENST00000622166 UBQLNLQ8IYU4 475 aa9.06□□□□□ -0.96
IGHV3-54-201ENST00000622166 GJD3Q8N144 294 aa9.06□□□□□ -0.96
IGHV3-54-201ENST00000622166 IQCF1Q8N6M8 205 aa9.06□□□□□ -0.96
IGHV3-54-201ENST00000622166 OR5D16Q8NGK9 328 aa9.06□□□□□ -0.96
IGHV3-54-201ENST00000622166 OR6T1Q8NGN1 323 aa9.06□□□□□ -0.96
IGHV3-54-201ENST00000622166 TMEM163Q8TC26 289 aa9.06□□□□□ -0.96
IGHV3-54-201ENST00000622166 SMG7Q92540 1137 aaKnown RBP9.06□□□□□ -0.96
IGHV3-54-201ENST00000622166 MS4A6EQ96DS6 147 aa9.06□□□□□ -0.96
IGHV3-54-201ENST00000622166 TRMT61AQ96FX7 289 aaKnown RBP9.06□□□□□ -0.96
IGHV3-54-201ENST00000622166 PAWRQ96IZ0 340 aaKnown RBP9.06□□□□□ -0.96
IGHV3-54-201ENST00000622166 ASB16Q96NS5 453 aa9.06□□□□□ -0.96
IGHV3-54-201ENST00000622166 AGAP4Q96P64 663 aa9.06□□□□□ -0.96
IGHV3-54-201ENST00000622166 SRRQ9GZT4 340 aa9.06□□□□□ -0.96
IGHV3-54-201ENST00000622166 ANKRD19PQ9H560 264 aa9.06□□□□□ -0.96
IGHV3-54-201ENST00000622166 RMI1Q9H9A7 625 aa9.06□□□□□ -0.96
IGHV3-54-201ENST00000622166 KCNK12Q9HB15 430 aa9.06□□□□□ -0.96
IGHV3-54-201ENST00000622166 PRDM7Q9NQW5 492 aa9.06□□□□□ -0.96
IGHV3-54-201ENST00000622166 TXNL4BQ9NX01 149 aaKnown RBP9.06□□□□□ -0.96
IGHV3-54-201ENST00000622166 CALML5Q9NZT1 146 aa9.06□□□□□ -0.96
IGHV3-54-201ENST00000622166 CES1P1Q9UKY3 287 aa9.06□□□□□ -0.96
IGHV3-54-201ENST00000622166 TBC1D24Q9ULP9 559 aa9.06□□□□□ -0.96
IGHV3-54-201ENST00000622166 EXOSC1Q9Y3B2 195 aaKnown RBP9.06□□□□□ -0.96
IGHV3-54-201ENST00000622166 SF3B6Q9Y3B4 125 aaKnown RBP9.06□□□□□ -0.96
IGHV3-54-201ENST00000622166 CMAHPQ9Y471 501 aa9.06□□□□□ -0.96
IGHV3-54-201ENST00000622166 NINQ8N4C6 2090 aa9.06□□□□□ -0.96
IGHV3-54-201ENST00000622166 HEATR5BQ9P2D3 2071 aa9.06□□□□□ -0.96
IGHV3-54-201ENST00000622166 A0A1W2PR48 441 aa9.05□□□□□ -0.96
IGHV3-54-201ENST00000622166 SNTNA6NMZ2 147 aa9.05□□□□□ -0.96
IGHV3-54-201ENST00000622166 PRODHO43272 600 aa9.05□□□□□ -0.96
IGHV3-54-201ENST00000622166 TLX2O43763 284 aaPredicted RBP9.05□□□□□ -0.96
IGHV3-54-201ENST00000622166 UBXN7O94888 489 aa9.05□□□□□ -0.96
IGHV3-54-201ENST00000622166 FHP07954 510 aa9.05□□□□□ -0.96
IGHV3-54-201ENST00000622166 F3P13726 295 aa9.05□□□□□ -0.96
IGHV3-54-201ENST00000622166 CSNK2A2P19784 350 aaPredicted RBP9.05□□□□□ -0.96
IGHV3-54-201ENST00000622166 HOXD12P35452 270 aa9.05□□□□□ -0.96
IGHV3-54-201ENST00000622166 ETV5P41161 510 aa9.05□□□□□ -0.96
IGHV3-54-201ENST00000622166 BCL6P41182 706 aa9.05□□□□□ -0.96
IGHV3-54-201ENST00000622166 STAT5AP42229 794 aa9.05□□□□□ -0.96
IGHV3-54-201ENST00000622166 TSFMP43897 325 aaKnown RBP9.05□□□□□ -0.96
IGHV3-54-201ENST00000622166 ETV1P50549 477 aa9.05□□□□□ -0.96
IGHV3-54-201ENST00000622166 WNT4P56705 351 aa9.05□□□□□ -0.96
IGHV3-54-201ENST00000622166 RUNX1T1Q06455 604 aa9.05□□□□□ -0.96
IGHV3-54-201ENST00000622166 RAB40BQ12829 278 aa9.05□□□□□ -0.96
IGHV3-54-201ENST00000622166 FOXD4Q12950 439 aaPredicted RBP9.05□□□□□ -0.96
IGHV3-54-201ENST00000622166 TSPAN31Q12999 210 aa9.05□□□□□ -0.96
IGHV3-54-201ENST00000622166 SLAMF1Q13291 335 aa9.05□□□□□ -0.96
IGHV3-54-201ENST00000622166 TRAM2Q15035 370 aa9.05□□□□□ -0.96
IGHV3-54-201ENST00000622166 GPR19Q15760 415 aa9.05□□□□□ -0.96
IGHV3-54-201ENST00000622166 TMEM44Q2T9K0 475 aa9.05□□□□□ -0.96
IGHV3-54-201ENST00000622166 PLK5Q496M5 336 aa9.05□□□□□ -0.96
IGHV3-54-201ENST00000622166 GLYR1Q49A26 553 aaPredicted RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms