RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 NKX2-4Q9H2Z4 354 aa13.27□□□□□ -0.29
PCDHGA3-202ENST00000612467 EGLN3Q9H6Z9 239 aa13.27□□□□□ -0.29
PCDHGA3-202ENST00000612467 FBXO8Q9NRD0 319 aa13.27□□□□□ -0.29
PCDHGA3-202ENST00000612467 IL20RAQ9UHF4 553 aa13.27□□□□□ -0.29
PCDHGA3-202ENST00000612467 GPR52Q9Y2T5 361 aa13.27□□□□□ -0.29
PCDHGA3-202ENST00000612467 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.27□□□□□ -0.29
PCDHGA3-202ENST00000612467 GPC6Q9Y625 555 aaPredicted RBP13.27□□□□□ -0.29
PCDHGA3-202ENST00000612467 AP1M2Q9Y6Q5 423 aa13.27□□□□□ -0.29
PCDHGA3-202ENST00000612467 SPTBP11277 2137 aa13.27□□□□□ -0.29
PCDHGA3-202ENST00000612467 SMIM30A4D0T7 59 aa13.26□□□□□ -0.29
PCDHGA3-202ENST00000612467 ZNF860A6NHJ4 632 aa13.26□□□□□ -0.29
PCDHGA3-202ENST00000612467 PRICKLE3O43900 615 aaPredicted RBP13.26□□□□□ -0.29
PCDHGA3-202ENST00000612467 CBFA2T3O75081 653 aa13.26□□□□□ -0.29
PCDHGA3-202ENST00000612467 UGT2B17O75795 530 aa13.26□□□□□ -0.29
PCDHGA3-202ENST00000612467 CHRNEQ04844 493 aa13.26□□□□□ -0.29
PCDHGA3-202ENST00000612467 MADCAM1Q13477 382 aa13.26□□□□□ -0.29
PCDHGA3-202ENST00000612467 ZIC1Q15915 447 aa13.26□□□□□ -0.29
PCDHGA3-202ENST00000612467 ZNF404Q494X3 552 aa13.26□□□□□ -0.29
PCDHGA3-202ENST00000612467 C6orf132Q5T0Z8 1188 aa13.26□□□□□ -0.29
PCDHGA3-202ENST00000612467 MLIPQ5VWP3 458 aa13.26□□□□□ -0.29
PCDHGA3-202ENST00000612467 ACSM5Q6NUN0 579 aa13.26□□□□□ -0.29
PCDHGA3-202ENST00000612467 ENPP7Q6UWV6 458 aa13.26□□□□□ -0.29
PCDHGA3-202ENST00000612467 SHFQ7M4L6 423 aa13.26□□□□□ -0.29
PCDHGA3-202ENST00000612467 SLC22A16Q86VW1 577 aa13.26□□□□□ -0.29
PCDHGA3-202ENST00000612467 SLC34A3Q8N130 599 aa13.26□□□□□ -0.29
PCDHGA3-202ENST00000612467 PATE1Q8WXA2 126 aa13.26□□□□□ -0.29
PCDHGA3-202ENST00000612467 OR1E3Q8WZA6 343 aa13.26□□□□□ -0.29
PCDHGA3-202ENST00000612467 DACH2Q96NX9 599 aa13.26□□□□□ -0.29
PCDHGA3-202ENST00000612467 WDR12Q9GZL7 423 aaKnown RBP13.26□□□□□ -0.29
PCDHGA3-202ENST00000612467 EXOSC4Q9NPD3 245 aaKnown RBP13.26□□□□□ -0.29
PCDHGA3-202ENST00000612467 WDR70Q9NW82 654 aa13.26□□□□□ -0.29
PCDHGA3-202ENST00000612467 CLN6Q9NWW5 311 aa13.26□□□□□ -0.29
PCDHGA3-202ENST00000612467 CARD8Q9Y2G2 431 aa13.26□□□□□ -0.29
PCDHGA3-202ENST00000612467 TLX2O43763 284 aaPredicted RBP13.26□□□□□ -0.29
PCDHGA3-202ENST00000612467 FCMRO60667 390 aa13.26□□□□□ -0.29
PCDHGA3-202ENST00000612467 GPX5O75715 221 aa13.26□□□□□ -0.29
PCDHGA3-202ENST00000612467 ZIC2O95409 532 aaPredicted RBP13.26□□□□□ -0.29
PCDHGA3-202ENST00000612467 RPLP0P05388 317 aaKnown RBP13.26□□□□□ -0.29
PCDHGA3-202ENST00000612467 ASGR2P07307 311 aa13.26□□□□□ -0.29
PCDHGA3-202ENST00000612467 ATXN8OSP0DMR3 200 aa13.26□□□□□ -0.29
PCDHGA3-202ENST00000612467 CD40LGP29965 261 aa13.26□□□□□ -0.29
PCDHGA3-202ENST00000612467 RPS21P63220 83 aaKnown RBP13.26□□□□□ -0.29
PCDHGA3-202ENST00000612467 ITPRIPL2Q3MIP1 535 aa13.26□□□□□ -0.29
PCDHGA3-202ENST00000612467 ZNF776Q68DI1 518 aaPredicted RBP13.26□□□□□ -0.29
PCDHGA3-202ENST00000612467 FAM46DQ8NEK8 389 aa13.26□□□□□ -0.29
PCDHGA3-202ENST00000612467 OR4K5Q8NGD3 323 aa13.26□□□□□ -0.29
PCDHGA3-202ENST00000612467 HTRA1Q92743 480 aa13.26□□□□□ -0.29
PCDHGA3-202ENST00000612467 ZNF607Q96SK3 696 aa13.26□□□□□ -0.29
PCDHGA3-202ENST00000612467 TRPV4Q9HBA0 871 aa13.26□□□□□ -0.29
PCDHGA3-202ENST00000612467 PALMDQ9NP74 551 aa13.26□□□□□ -0.29
PCDHGA3-202ENST00000612467 SACM1LQ9NTJ5 587 aa13.26□□□□□ -0.29
PCDHGA3-202ENST00000612467 TBCCD1Q9NVR7 557 aa13.26□□□□□ -0.29
PCDHGA3-202ENST00000612467 SLC17A4Q9Y2C5 497 aa13.26□□□□□ -0.29
PCDHGA3-202ENST00000612467 CPSF4LA6NMK7 179 aaKnown RBP13.26□□□□□ -0.29
PCDHGA3-202ENST00000612467 KIAA0513O60268 411 aa13.26□□□□□ -0.29
PCDHGA3-202ENST00000612467 ADH1BP00325 375 aa13.26□□□□□ -0.29
PCDHGA3-202ENST00000612467 POU2F2P09086 479 aa13.26□□□□□ -0.29
PCDHGA3-202ENST00000612467 CDH3P22223 829 aa13.26□□□□□ -0.29
PCDHGA3-202ENST00000612467 HSD17B2P37059 387 aa13.26□□□□□ -0.29
PCDHGA3-202ENST00000612467 UGT2B15P54855 530 aa13.26□□□□□ -0.29
PCDHGA3-202ENST00000612467 CSNK2BP67870 215 aa13.26□□□□□ -0.29
PCDHGA3-202ENST00000612467 ANKRD54Q6NXT1 300 aa13.26□□□□□ -0.29
PCDHGA3-202ENST00000612467 YIPF2Q9BWQ6 316 aa13.26□□□□□ -0.29
PCDHGA3-202ENST00000612467 ACSS1Q9NUB1 689 aaPredicted RBP13.26□□□□□ -0.29
PCDHGA3-202ENST00000612467 CNIH4Q9P003 139 aa13.26□□□□□ -0.29
PCDHGA3-202ENST00000612467 PCDHGA3Q9Y5H0 932 aa13.26□□□□□ -0.29
PCDHGA3-202ENST00000612467 TICRRQ7Z2Z1 1910 aa13.25□□□□□ -0.29
PCDHGA3-202ENST00000612467 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.25□□□□□ -0.29
PCDHGA3-202ENST00000612467 CNOT3O75175 753 aaKnown RBP13.25□□□□□ -0.29
PCDHGA3-202ENST00000612467 ADAP00813 363 aa13.25□□□□□ -0.29
PCDHGA3-202ENST00000612467 EGFP01133 1207 aa13.25□□□□□ -0.29
PCDHGA3-202ENST00000612467 NTSP30990 170 aa13.25□□□□□ -0.29
PCDHGA3-202ENST00000612467 GRK3P35626 688 aa13.25□□□□□ -0.29
PCDHGA3-202ENST00000612467 AVPR1BP47901 424 aa13.25□□□□□ -0.29
PCDHGA3-202ENST00000612467 DMPKQ09013 629 aa13.25□□□□□ -0.29
PCDHGA3-202ENST00000612467 TJAP1Q5JTD0 557 aa13.25□□□□□ -0.29
PCDHGA3-202ENST00000612467 CLEC12AQ5QGZ9 265 aa13.25□□□□□ -0.29
PCDHGA3-202ENST00000612467 PLAG1Q6DJT9 500 aa13.25□□□□□ -0.29
PCDHGA3-202ENST00000612467 FAM111BQ6SJ93 734 aa13.25□□□□□ -0.29
PCDHGA3-202ENST00000612467 ATCAYQ86WG3 371 aa13.25□□□□□ -0.29
PCDHGA3-202ENST00000612467 RAB42Q8N4Z0 105 aa13.25□□□□□ -0.29
PCDHGA3-202ENST00000612467 OPALINQ96PE5 141 aa13.25□□□□□ -0.29
PCDHGA3-202ENST00000612467 FNDC11Q9BVV2 318 aa13.25□□□□□ -0.29
PCDHGA3-202ENST00000612467 MROQ9BYG7 248 aa13.25□□□□□ -0.29
PCDHGA3-202ENST00000612467 B3GNT3Q9Y2A9 372 aa13.25□□□□□ -0.29
PCDHGA3-202ENST00000612467 CHST2Q9Y4C5 530 aa13.25□□□□□ -0.29
PCDHGA3-202ENST00000612467 DNMT3AQ9Y6K1 912 aaPredicted RBP13.25□□□□□ -0.29
PCDHGA3-202ENST00000612467 CENPVL1A0A0U1RR11 272 aa13.25□□□□□ -0.29
PCDHGA3-202ENST00000612467 CTDSP2O14595 271 aa13.25□□□□□ -0.29
PCDHGA3-202ENST00000612467 TBX19O60806 448 aa13.25□□□□□ -0.29
PCDHGA3-202ENST00000612467 CSO75390 466 aaKnown RBP13.25□□□□□ -0.29
PCDHGA3-202ENST00000612467 ZNF888P0CJ79 500 aaPredicted RBP13.25□□□□□ -0.29
PCDHGA3-202ENST00000612467 ZNF91Q05481 1191 aa13.25□□□□□ -0.29
PCDHGA3-202ENST00000612467 ENPP2Q13822 863 aa13.25□□□□□ -0.29
PCDHGA3-202ENST00000612467 VN1R4Q7Z5H5 301 aa13.25□□□□□ -0.29
PCDHGA3-202ENST00000612467 KIF18BQ86Y91 864 aa13.25□□□□□ -0.29
PCDHGA3-202ENST00000612467 IL17RCQ8NAC3 791 aa13.25□□□□□ -0.29
PCDHGA3-202ENST00000612467 FCGR1BQ92637 280 aa13.25□□□□□ -0.29
PCDHGA3-202ENST00000612467 OR7D2Q96RA2 312 aa13.25□□□□□ -0.29
PCDHGA3-202ENST00000612467 BCL7BQ9BQE9 202 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms