RNA–Protein interactions for RNA: ENST00000608461.1

HDDC2-206, Transcript of HD domain containing 2, humanhuman

TSL 2

Gene HDDC2, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-206ENST00000608461 PPICP45877 212 aa13.19□□□□□ -0.3
HDDC2-206ENST00000608461 TDGF1P3P51864 188 aa13.19□□□□□ -0.3
HDDC2-206ENST00000608461 EMX2Q04743 252 aa13.19□□□□□ -0.3
HDDC2-206ENST00000608461 PDE7AQ13946 482 aa13.19□□□□□ -0.3
HDDC2-206ENST00000608461 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.19□□□□□ -0.3
HDDC2-206ENST00000608461 TRMT12Q53H54 448 aaKnown RBP13.19□□□□□ -0.3
HDDC2-206ENST00000608461 SLC22A10Q63ZE4 541 aa13.19□□□□□ -0.3
HDDC2-206ENST00000608461 FAM111BQ6SJ93 734 aa13.19□□□□□ -0.3
HDDC2-206ENST00000608461 C16orf47Q6ZP98 133 aaPredicted RBP13.19□□□□□ -0.3
HDDC2-206ENST00000608461 RGS9BPQ6ZS82 235 aa13.19□□□□□ -0.3
HDDC2-206ENST00000608461 MDGA2Q7Z553 956 aa13.19□□□□□ -0.3
HDDC2-206ENST00000608461 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.19□□□□□ -0.3
HDDC2-206ENST00000608461 SULF2Q8IWU5 870 aa13.19□□□□□ -0.3
HDDC2-206ENST00000608461 FNDC5Q8NAU1 212 aa13.19□□□□□ -0.3
HDDC2-206ENST00000608461 ZFP62Q8NB50 900 aaPredicted RBP13.19□□□□□ -0.3
HDDC2-206ENST00000608461 ADCY4Q8NFM4 1077 aa13.19□□□□□ -0.3
HDDC2-206ENST00000608461 ZFP28Q8NHY6 868 aa13.19□□□□□ -0.3
HDDC2-206ENST00000608461 TUBGCP3Q96CW5 907 aa13.19□□□□□ -0.3
HDDC2-206ENST00000608461 EGLN2Q96KS0 407 aa13.19□□□□□ -0.3
HDDC2-206ENST00000608461 C3orf30Q96M34 536 aa13.19□□□□□ -0.3
HDDC2-206ENST00000608461 MANSC1Q9H8J5 431 aa13.19□□□□□ -0.3
HDDC2-206ENST00000608461 SACM1LQ9NTJ5 587 aa13.19□□□□□ -0.3
HDDC2-206ENST00000608461 ACSS1Q9NUB1 689 aaPredicted RBP13.19□□□□□ -0.3
HDDC2-206ENST00000608461 TAS2R9Q9NYW1 312 aa13.19□□□□□ -0.3
HDDC2-206ENST00000608461 BCAP29Q9UHQ4 241 aa13.19□□□□□ -0.3
HDDC2-206ENST00000608461 EIF3LQ9Y262 564 aaKnown RBP13.19□□□□□ -0.3
HDDC2-206ENST00000608461 ATP6AP2A0A1C7CYW4 349 aa13.18□□□□□ -0.3
HDDC2-206ENST00000608461 ANKRD33BA6NCL7 494 aa13.18□□□□□ -0.3
HDDC2-206ENST00000608461 TTC36A6NLP5 189 aa13.18□□□□□ -0.3
HDDC2-206ENST00000608461 TP53I11O14683 189 aa13.18□□□□□ -0.3
HDDC2-206ENST00000608461 PEX1O43933 1283 aa13.18□□□□□ -0.3
HDDC2-206ENST00000608461 COQ9O75208 318 aa13.18□□□□□ -0.3
HDDC2-206ENST00000608461 ATP6AP2O75787 350 aa13.18□□□□□ -0.3
HDDC2-206ENST00000608461 CBX7O95931 251 aa13.18□□□□□ -0.3
HDDC2-206ENST00000608461 P04436 131 aa13.18□□□□□ -0.3
HDDC2-206ENST00000608461 PRPS1L1P21108 318 aa13.18□□□□□ -0.3
HDDC2-206ENST00000608461 CNR1P21554 472 aa13.18□□□□□ -0.3
HDDC2-206ENST00000608461 GPX3P22352 226 aa13.18□□□□□ -0.3
HDDC2-206ENST00000608461 GNLYP22749 145 aa13.18□□□□□ -0.3
HDDC2-206ENST00000608461 SOX18P35713 384 aa13.18□□□□□ -0.3
HDDC2-206ENST00000608461 FRKP42685 505 aaPredicted RBP13.18□□□□□ -0.3
HDDC2-206ENST00000608461 EMDP50402 254 aa13.18□□□□□ -0.3
HDDC2-206ENST00000608461 NR0B1P51843 470 aaKnown RBP13.18□□□□□ -0.3
HDDC2-206ENST00000608461 NCBP2P52298 156 aaKnown RBP eCLIP13.18□□□□□ -0.3
HDDC2-206ENST00000608461 C21orf58P58505 322 aa13.18□□□□□ -0.3
HDDC2-206ENST00000608461 RPP38P78345 283 aaKnown RBP13.18□□□□□ -0.3
HDDC2-206ENST00000608461 ALDH6A1Q02252 535 aaKnown RBP13.18□□□□□ -0.3
HDDC2-206ENST00000608461 DUSP2Q05923 314 aa13.18□□□□□ -0.3
HDDC2-206ENST00000608461 MLC1Q15049 377 aa13.18□□□□□ -0.3
HDDC2-206ENST00000608461 NTRK2Q16620 822 aa13.18□□□□□ -0.3
HDDC2-206ENST00000608461 TBCELQ5QJ74 424 aa13.18□□□□□ -0.3
HDDC2-206ENST00000608461 FAM180BQ6P0A1 224 aa13.18□□□□□ -0.3
HDDC2-206ENST00000608461 LYPD8Q6UX82 237 aa13.18□□□□□ -0.3
HDDC2-206ENST00000608461 GK5Q6ZS86 529 aa13.18□□□□□ -0.3
HDDC2-206ENST00000608461 OR52R1Q8NGF1 315 aa13.18□□□□□ -0.3
HDDC2-206ENST00000608461 OR9A2Q8NGT5 310 aa13.18□□□□□ -0.3
HDDC2-206ENST00000608461 PAQR8Q8TEZ7 354 aa13.18□□□□□ -0.3
HDDC2-206ENST00000608461 ARL8AQ96BM9 186 aa13.18□□□□□ -0.3
HDDC2-206ENST00000608461 PPCDCQ96CD2 204 aa13.18□□□□□ -0.3
HDDC2-206ENST00000608461 ZBED6CLQ96FA7 236 aaPredicted RBP13.18□□□□□ -0.3
HDDC2-206ENST00000608461 LCORQ96JN0 433 aaPredicted RBP13.18□□□□□ -0.3
HDDC2-206ENST00000608461 AMDHD1Q96NU7 426 aa13.18□□□□□ -0.3
HDDC2-206ENST00000608461 TSSK3Q96PN8 268 aa13.18□□□□□ -0.3
HDDC2-206ENST00000608461 PRPF18Q99633 342 aaKnown RBP13.18□□□□□ -0.3
HDDC2-206ENST00000608461 FAM173AQ9BQD7 235 aa13.18□□□□□ -0.3
HDDC2-206ENST00000608461 HES7Q9BYE0 225 aa13.18□□□□□ -0.3
HDDC2-206ENST00000608461 SH2D2AQ9NP31 389 aa13.18□□□□□ -0.3
HDDC2-206ENST00000608461 ATAD3AQ9NVI7 634 aa13.18□□□□□ -0.3
HDDC2-206ENST00000608461 NOP53Q9NZM5 478 aaKnown RBP13.18□□□□□ -0.3
HDDC2-206ENST00000608461 NPFFR2Q9Y5X5 522 aa13.18□□□□□ -0.3
HDDC2-206ENST00000608461 NBASA2RRP1 2371 aa13.17□□□□□ -0.3
HDDC2-206ENST00000608461 BAHCC1Q9P281 2608 aa13.17□□□□□ -0.3
HDDC2-206ENST00000608461 RP1L1Q8IWN7 2480 aaPredicted RBP13.17□□□□□ -0.3
HDDC2-206ENST00000608461 CLEC18AA5D8T8 446 aa13.17□□□□□ -0.3
HDDC2-206ENST00000608461 TRPC5OSA6NMA1 111 aa13.17□□□□□ -0.3
HDDC2-206ENST00000608461 PYCARD-AS1I3L0S3 204 aa13.17□□□□□ -0.3
HDDC2-206ENST00000608461 TO15178 435 aa13.17□□□□□ -0.3
HDDC2-206ENST00000608461 PDPK1O15530 556 aa13.17□□□□□ -0.3
HDDC2-206ENST00000608461 ZNF354AO60765 605 aaPredicted RBP13.17□□□□□ -0.3
HDDC2-206ENST00000608461 JUNP05412 331 aaKnown RBP13.17□□□□□ -0.3
HDDC2-206ENST00000608461 ZNF24P17028 368 aa13.17□□□□□ -0.3
HDDC2-206ENST00000608461 HPCAL1P37235 193 aa13.17□□□□□ -0.3
HDDC2-206ENST00000608461 MEOX1P50221 254 aa13.17□□□□□ -0.3
HDDC2-206ENST00000608461 MRPS35P82673 323 aaKnown RBP13.17□□□□□ -0.3
HDDC2-206ENST00000608461 RBPJQ06330 500 aa13.17□□□□□ -0.3
HDDC2-206ENST00000608461 EXOSC7Q15024 291 aaKnown RBP13.17□□□□□ -0.3
HDDC2-206ENST00000608461 RPS6KA2Q15349 733 aa13.17□□□□□ -0.3
HDDC2-206ENST00000608461 LTB4RQ15722 352 aa13.17□□□□□ -0.3
HDDC2-206ENST00000608461 FHL5Q5TD97 284 aa13.17□□□□□ -0.3
HDDC2-206ENST00000608461 IL23RQ5VWK5 629 aa13.17□□□□□ -0.3
HDDC2-206ENST00000608461 CLEC18BQ6UXF7 455 aa13.17□□□□□ -0.3
HDDC2-206ENST00000608461 LIX1Q8N485 282 aa13.17□□□□□ -0.3
HDDC2-206ENST00000608461 FAM26EQ8N5C1 309 aa13.17□□□□□ -0.3
HDDC2-206ENST00000608461 CLEC18CQ8NCF0 446 aa13.17□□□□□ -0.3
HDDC2-206ENST00000608461 MGARPQ8TDB4 240 aa13.17□□□□□ -0.3
HDDC2-206ENST00000608461 DOK4Q8TEW6 326 aa13.17□□□□□ -0.3
HDDC2-206ENST00000608461 ZBTB9Q96C00 473 aa13.17□□□□□ -0.3
HDDC2-206ENST00000608461 BTBD9Q96Q07 612 aa13.17□□□□□ -0.3
HDDC2-206ENST00000608461 ACBD3Q9H3P7 528 aa13.17□□□□□ -0.3
HDDC2-206ENST00000608461 GLIPR2Q9H4G4 154 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms