RNA–Protein interactions for RNA: ENST00000608263.5

CTCFL-216, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 4,040 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-216ENST00000608263 ZNF24P17028 368 aa9.84□□□□□ -0.83
CTCFL-216ENST00000608263 RBBP4Q09028 425 aa9.84□□□□□ -0.83
CTCFL-216ENST00000608263 SMU1Q2TAY7 513 aa9.84□□□□□ -0.83
CTCFL-216ENST00000608263 ZNF385BQ569K4 471 aa9.84□□□□□ -0.83
CTCFL-216ENST00000608263 ZNF805Q5CZA5 627 aa9.84□□□□□ -0.83
CTCFL-216ENST00000608263 TANGO2Q6ICL3 276 aa9.84□□□□□ -0.83
CTCFL-216ENST00000608263 TMEM107Q6UX40 140 aa9.84□□□□□ -0.83
CTCFL-216ENST00000608263 HORMAD2Q8N7B1 307 aa9.84□□□□□ -0.83
CTCFL-216ENST00000608263 LMX1AQ8TE12 382 aa9.84□□□□□ -0.83
CTCFL-216ENST00000608263 SMPDL3AQ92484 453 aa9.84□□□□□ -0.83
CTCFL-216ENST00000608263 FAM46AQ96IP4 442 aaKnown RBP9.84□□□□□ -0.83
CTCFL-216ENST00000608263 SHDQ96IW2 340 aa9.84□□□□□ -0.83
CTCFL-216ENST00000608263 NDRG4Q9ULP0 352 aaKnown RBP9.84□□□□□ -0.83
CTCFL-216ENST00000608263 PCDHGA3Q9Y5H0 932 aa9.84□□□□□ -0.83
CTCFL-216ENST00000608263 ICE1Q9Y2F5 2266 aa9.84□□□□□ -0.83
CTCFL-216ENST00000608263 PCM1Q15154 2024 aa9.84□□□□□ -0.83
CTCFL-216ENST00000608263 CLDN24A6NM45 220 aa9.84□□□□□ -0.83
CTCFL-216ENST00000608263 HCN1O60741 890 aa9.84□□□□□ -0.83
CTCFL-216ENST00000608263 PRKRAO75569 313 aaKnown RBP9.84□□□□□ -0.83
CTCFL-216ENST00000608263 RACK1P63244 317 aaKnown RBP9.84□□□□□ -0.83
CTCFL-216ENST00000608263 PRR5P85299 388 aa9.84□□□□□ -0.83
CTCFL-216ENST00000608263 GNA13Q14344 377 aa9.84□□□□□ -0.83
CTCFL-216ENST00000608263 ELAVL3Q14576 367 aaKnown RBP9.84□□□□□ -0.83
CTCFL-216ENST00000608263 PTOV1Q86YD1 416 aa9.84□□□□□ -0.83
CTCFL-216ENST00000608263 CBARPQ8N350 705 aaPredicted RBP9.84□□□□□ -0.83
CTCFL-216ENST00000608263 OR51A7Q8NH64 312 aa9.84□□□□□ -0.83
CTCFL-216ENST00000608263 RASSF5Q8WWW0 418 aa9.84□□□□□ -0.83
CTCFL-216ENST00000608263 COQ8BQ96D53 544 aa9.84□□□□□ -0.83
CTCFL-216ENST00000608263 CNDP2Q96KP4 475 aaKnown RBP9.84□□□□□ -0.83
CTCFL-216ENST00000608263 HHIPQ96QV1 700 aa9.84□□□□□ -0.83
CTCFL-216ENST00000608263 EXTL2Q9UBQ6 330 aa9.84□□□□□ -0.83
CTCFL-216ENST00000608263 CSNK1G3Q9Y6M4 447 aa9.84□□□□□ -0.83
CTCFL-216ENST00000608263 H3BNC9 293 aa9.83□□□□□ -0.84
CTCFL-216ENST00000608263 STX11O75558 287 aa9.83□□□□□ -0.84
CTCFL-216ENST00000608263 NCR1O76036 304 aa9.83□□□□□ -0.84
CTCFL-216ENST00000608263 OSMP13725 252 aa9.83□□□□□ -0.84
CTCFL-216ENST00000608263 GNSP15586 552 aa9.83□□□□□ -0.84
CTCFL-216ENST00000608263 ZNF10P21506 573 aaPredicted RBP9.83□□□□□ -0.84
CTCFL-216ENST00000608263 ACVR1BP36896 505 aa9.83□□□□□ -0.84
CTCFL-216ENST00000608263 SLC9A3P48764 834 aa9.83□□□□□ -0.84
CTCFL-216ENST00000608263 BTN3A2P78410 334 aa9.83□□□□□ -0.84
CTCFL-216ENST00000608263 FAM92BQ6ZTR7 304 aa9.83□□□□□ -0.84
CTCFL-216ENST00000608263 USP53Q70EK8 1073 aa9.83□□□□□ -0.84
CTCFL-216ENST00000608263 ERN2Q76MJ5 926 aaKnown RBP9.83□□□□□ -0.84
CTCFL-216ENST00000608263 CXXC5Q7LFL8 322 aaKnown RBP9.83□□□□□ -0.84
CTCFL-216ENST00000608263 TRAM1L1Q8N609 369 aa9.83□□□□□ -0.84
CTCFL-216ENST00000608263 ECHDC3Q96DC8 303 aa9.83□□□□□ -0.84
CTCFL-216ENST00000608263 ARSGQ96EG1 525 aa9.83□□□□□ -0.84
CTCFL-216ENST00000608263 BHLHE41Q9C0J9 482 aaPredicted RBP9.83□□□□□ -0.84
CTCFL-216ENST00000608263 RANGRFQ9HD47 186 aaPredicted RBP9.83□□□□□ -0.84
CTCFL-216ENST00000608263 MRPS30Q9NP92 439 aaKnown RBP9.83□□□□□ -0.84
CTCFL-216ENST00000608263 AKIP1Q9NQ31 210 aa9.83□□□□□ -0.84
CTCFL-216ENST00000608263 YARS2Q9Y2Z4 477 aaKnown RBP9.83□□□□□ -0.84
CTCFL-216ENST00000608263 CCDC88CQ9P219 2028 aa9.83□□□□□ -0.84
CTCFL-216ENST00000608263 MEIOCA2RUB1 952 aa9.83□□□□□ -0.84
CTCFL-216ENST00000608263 FAM86C2PA6NEL3 165 aa9.83□□□□□ -0.84
CTCFL-216ENST00000608263 WASHC1A8K0Z3 465 aa9.83□□□□□ -0.84
CTCFL-216ENST00000608263 AREL1O15033 823 aa9.83□□□□□ -0.84
CTCFL-216ENST00000608263 REM1O75628 298 aa9.83□□□□□ -0.84
CTCFL-216ENST00000608263 RAB36O95755 333 aa9.83□□□□□ -0.84
CTCFL-216ENST00000608263 CSNK2A2P19784 350 aaPredicted RBP9.83□□□□□ -0.84
CTCFL-216ENST00000608263 ZNF91Q05481 1191 aa9.83□□□□□ -0.84
CTCFL-216ENST00000608263 EOGTQ5NDL2 527 aa9.83□□□□□ -0.84
CTCFL-216ENST00000608263 LRIF1Q5T3J3 769 aa9.83□□□□□ -0.84
CTCFL-216ENST00000608263 AGAP6Q5VW22 663 aa9.83□□□□□ -0.84
CTCFL-216ENST00000608263 WASH2PQ6VEQ5 465 aa9.83□□□□□ -0.84
CTCFL-216ENST00000608263 SAMD12Q8N8I0 201 aa9.83□□□□□ -0.84
CTCFL-216ENST00000608263 FAM3CQ92520 227 aa9.83□□□□□ -0.84
CTCFL-216ENST00000608263 FATE1Q969F0 183 aa9.83□□□□□ -0.84
CTCFL-216ENST00000608263 PMEPA1Q969W9 287 aa9.83□□□□□ -0.84
CTCFL-216ENST00000608263 AGAP4Q96P64 663 aa9.83□□□□□ -0.84
CTCFL-216ENST00000608263 TTLL2Q9BWV7 592 aa9.83□□□□□ -0.84
CTCFL-216ENST00000608263 DMRT3Q9NQL9 472 aa9.83□□□□□ -0.84
CTCFL-216ENST00000608263 PAK6Q9NQU5 681 aaPredicted RBP9.83□□□□□ -0.84
CTCFL-216ENST00000608263 TMEM45AQ9NWC5 275 aa9.83□□□□□ -0.84
CTCFL-216ENST00000608263 CUEDC1Q9NWM3 386 aaPredicted RBP9.83□□□□□ -0.84
CTCFL-216ENST00000608263 MRPL15Q9P015 296 aaKnown RBP9.83□□□□□ -0.84
CTCFL-216ENST00000608263 CD207Q9UJ71 328 aa9.83□□□□□ -0.84
CTCFL-216ENST00000608263 STON1Q9Y6Q2 735 aa9.83□□□□□ -0.84
CTCFL-216ENST00000608263 TMEM221A6NGB7 291 aa9.83□□□□□ -0.84
CTCFL-216ENST00000608263 IFITM3Q01628 133 aa9.83□□□□□ -0.84
CTCFL-216ENST00000608263 RGS1Q08116 209 aa9.83□□□□□ -0.84
CTCFL-216ENST00000608263 FCRLBQ6BAA4 426 aa9.83□□□□□ -0.84
CTCFL-216ENST00000608263 ALG1LQ6GMV1 187 aa9.83□□□□□ -0.84
CTCFL-216ENST00000608263 SLC27A4Q6P1M0 643 aa9.83□□□□□ -0.84
CTCFL-216ENST00000608263 GDPD3Q7L5L3 318 aa9.83□□□□□ -0.84
CTCFL-216ENST00000608263 ANKRD33Q7Z3H0 272 aa9.83□□□□□ -0.84
CTCFL-216ENST00000608263 PJA1Q8NG27 643 aa9.83□□□□□ -0.84
CTCFL-216ENST00000608263 OR51L1Q8NGJ5 315 aa9.83□□□□□ -0.84
CTCFL-216ENST00000608263 OR6K6Q8NGW6 343 aa9.83□□□□□ -0.84
CTCFL-216ENST00000608263 RPLP0P6Q8NHW5 317 aa9.83□□□□□ -0.84
CTCFL-216ENST00000608263 SUN5Q8TC36 379 aa9.83□□□□□ -0.84
CTCFL-216ENST00000608263 PCNPQ8WW12 178 aaKnown RBP9.83□□□□□ -0.84
CTCFL-216ENST00000608263 RFKQ969G6 155 aa9.83□□□□□ -0.84
CTCFL-216ENST00000608263 MCHR1Q99705 422 aa9.83□□□□□ -0.84
CTCFL-216ENST00000608263 ANKHQ9HCJ1 492 aa9.83□□□□□ -0.84
CTCFL-216ENST00000608263 STUB1Q9UNE7 303 aa9.83□□□□□ -0.84
CTCFL-216ENST00000608263 COLEC10Q9Y6Z7 277 aa9.83□□□□□ -0.84
CTCFL-216ENST00000608263 IQCMA0A1B0GVH7 501 aa9.82□□□□□ -0.84
CTCFL-216ENST00000608263 INMT-MINDY4F8WBC2 141 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms