RNA–Protein interactions for RNA: ENST00000604030.6

SH3D19-211, Transcript of SH3 domain containing 19, humanhuman

TSL 5 BASIC

Gene SH3D19, Length 5,228 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-211ENST00000604030 ARF1P84077 181 aaKnown RBP20.1■□□□□ 0.81
SH3D19-211ENST00000604030 ALKBH2Q6NS38 261 aa20.1■□□□□ 0.81
SH3D19-211ENST00000604030 C16orf78Q8WTQ4 265 aa20.1■□□□□ 0.81
SH3D19-211ENST00000604030 PITHD1Q9GZP4 211 aaPredicted RBP20.1■□□□□ 0.81
SH3D19-211ENST00000604030 ENY2Q9NPA8 101 aa20.1■□□□□ 0.81
SH3D19-211ENST00000604030 TLR9Q9NR96 1032 aa20.1■□□□□ 0.81
SH3D19-211ENST00000604030 LOC100509620A0A075B734 347 aa20.1■□□□□ 0.81
SH3D19-211ENST00000604030 HNRNPA1P09651 372 aaKnown RBP eCLIP20.1■□□□□ 0.81
SH3D19-211ENST00000604030 METTL11BQ5VVY1 283 aa20.1■□□□□ 0.81
SH3D19-211ENST00000604030 TMEM151AQ8N4L1 468 aa20.1■□□□□ 0.81
SH3D19-211ENST00000604030 HMGB4Q8WW32 186 aa20.1■□□□□ 0.81
SH3D19-211ENST00000604030 DPH2Q9BQC3 489 aaPredicted RBP20.1■□□□□ 0.81
SH3D19-211ENST00000604030 RNASET2O00584 256 aaKnown RBP20.09■□□□□ 0.81
SH3D19-211ENST00000604030 IFNA5P01569 189 aa20.09■□□□□ 0.81
SH3D19-211ENST00000604030 HTR2BP41595 481 aa20.09■□□□□ 0.81
SH3D19-211ENST00000604030 FNTBP49356 437 aa20.09■□□□□ 0.81
SH3D19-211ENST00000604030 SF3A2Q15428 464 aaKnown RBP20.09■□□□□ 0.81
SH3D19-211ENST00000604030 RNASE10Q5GAN6 216 aaKnown RBP20.09■□□□□ 0.81
SH3D19-211ENST00000604030 TMEM164Q5U3C3 297 aa20.09■□□□□ 0.81
SH3D19-211ENST00000604030 SSX6Q7RTT6 188 aa20.09■□□□□ 0.81
SH3D19-211ENST00000604030 TMEM173Q86WV6 379 aaPredicted RBP20.09■□□□□ 0.81
SH3D19-211ENST00000604030 ARHGAP12Q8IWW6 846 aa20.09■□□□□ 0.81
SH3D19-211ENST00000604030 NPWQ8N729 165 aa20.09■□□□□ 0.81
SH3D19-211ENST00000604030 DPCDQ9BVM2 203 aaPredicted RBP20.09■□□□□ 0.81
SH3D19-211ENST00000604030 WASH4PA8MWX3 477 aa20.09■□□□□ 0.81
SH3D19-211ENST00000604030 CASC3O15234 703 aaKnown RBP20.09■□□□□ 0.81
SH3D19-211ENST00000604030 PRKCAP17252 672 aa20.09■□□□□ 0.81
SH3D19-211ENST00000604030 ELOAQ14241 798 aaKnown RBP20.09■□□□□ 0.81
SH3D19-211ENST00000604030 RAB11BQ15907 218 aa20.09■□□□□ 0.81
SH3D19-211ENST00000604030 SCAMP4Q969E2 229 aa20.09■□□□□ 0.81
SH3D19-211ENST00000604030 DNAJC5Q9H3Z4 198 aa20.09■□□□□ 0.81
SH3D19-211ENST00000604030 KCNK13Q9HB14 408 aa20.09■□□□□ 0.81
SH3D19-211ENST00000604030 CLEC4EQ9ULY5 219 aa20.09■□□□□ 0.81
SH3D19-211ENST00000604030 SLC7A11Q9UPY5 501 aa20.09■□□□□ 0.81
SH3D19-211ENST00000604030 CD8B2A6NJW9 211 aa20.09■□□□□ 0.81
SH3D19-211ENST00000604030 STC2O76061 302 aa20.09■□□□□ 0.81
SH3D19-211ENST00000604030 CD8BP10966 210 aa20.09■□□□□ 0.81
SH3D19-211ENST00000604030 OPRL1P41146 370 aa20.09■□□□□ 0.81
SH3D19-211ENST00000604030 GDI2P50395 445 aaKnown RBP20.09■□□□□ 0.81
SH3D19-211ENST00000604030 ELAVL3Q14576 367 aaKnown RBP20.09■□□□□ 0.81
SH3D19-211ENST00000604030 ATXN7L3Q14CW9 347 aaPredicted RBP20.09■□□□□ 0.81
SH3D19-211ENST00000604030 PLAG1Q6DJT9 500 aa20.09■□□□□ 0.81
SH3D19-211ENST00000604030 MAMDC4Q6UXC1 1216 aa20.09■□□□□ 0.81
SH3D19-211ENST00000604030 GLOD5A6NK44 160 aa20.09■□□□□ 0.81
SH3D19-211ENST00000604030 PAHP00439 452 aa20.09■□□□□ 0.81
SH3D19-211ENST00000604030 GGT2P36268 569 aa20.09■□□□□ 0.81
SH3D19-211ENST00000604030 GSG1LQ6UXU4 331 aa20.09■□□□□ 0.81
SH3D19-211ENST00000604030 OR51A7Q8NH64 312 aa20.09■□□□□ 0.81
SH3D19-211ENST00000604030 WDR92Q96MX6 357 aa20.09■□□□□ 0.81
SH3D19-211ENST00000604030 RAD9AQ99638 391 aa20.09■□□□□ 0.81
SH3D19-211ENST00000604030 DZANK1Q9NVP4 752 aa20.09■□□□□ 0.81
SH3D19-211ENST00000604030 LOC285095A0A1B0GVY8 99 aa20.08■□□□□ 0.81
SH3D19-211ENST00000604030 SLC35F4A4IF30 521 aa20.08■□□□□ 0.81
SH3D19-211ENST00000604030 ETFAP13804 333 aa20.08■□□□□ 0.81
SH3D19-211ENST00000604030 SPINT3P49223 89 aa20.08■□□□□ 0.81
SH3D19-211ENST00000604030 ARL14Q8N4G2 192 aa20.08■□□□□ 0.81
SH3D19-211ENST00000604030 GMLQ99445 158 aa20.08■□□□□ 0.81
SH3D19-211ENST00000604030 SLC30A3Q99726 388 aa20.08■□□□□ 0.81
SH3D19-211ENST00000604030 PPIL3Q9H2H8 161 aaKnown RBP20.08■□□□□ 0.81
SH3D19-211ENST00000604030 NELFAQ9H3P2 528 aa20.08■□□□□ 0.81
SH3D19-211ENST00000604030 HEBP1Q9NRV9 189 aa20.08■□□□□ 0.81
SH3D19-211ENST00000604030 KHNYNO15037 678 aaKnown RBP20.08■□□□□ 0.81
SH3D19-211ENST00000604030 PAK4O96013 591 aaPredicted RBP20.08■□□□□ 0.81
SH3D19-211ENST00000604030 ZNF14P17017 642 aaPredicted RBP20.08■□□□□ 0.81
SH3D19-211ENST00000604030 USF2Q15853 346 aaPredicted RBP20.08■□□□□ 0.81
SH3D19-211ENST00000604030 C3orf33Q6P1S2 294 aa20.08■□□□□ 0.81
SH3D19-211ENST00000604030 GPRIN1Q7Z2K8 1008 aa20.08■□□□□ 0.81
SH3D19-211ENST00000604030 OR8K5Q8NH50 307 aa20.08■□□□□ 0.81
SH3D19-211ENST00000604030 NINJ1Q92982 152 aa20.08■□□□□ 0.81
SH3D19-211ENST00000604030 ARRB1P49407 418 aaPredicted RBP20.08■□□□□ 0.8
SH3D19-211ENST00000604030 OC90Q02509 493 aaPredicted RBP20.08■□□□□ 0.8
SH3D19-211ENST00000604030 SOX4Q06945 474 aaPredicted RBP20.08■□□□□ 0.8
SH3D19-211ENST00000604030 GRM2Q14416 872 aa20.08■□□□□ 0.8
SH3D19-211ENST00000604030 FAM69AQ5T7M9 428 aa20.08■□□□□ 0.8
SH3D19-211ENST00000604030 ANKRD54Q6NXT1 300 aa20.08■□□□□ 0.8
SH3D19-211ENST00000604030 OR5T2Q8NGG2 359 aa20.08■□□□□ 0.8
SH3D19-211ENST00000604030 NETO1Q8TDF5 533 aa20.08■□□□□ 0.8
SH3D19-211ENST00000604030 DAZLQ92904 295 aaKnown RBP20.08■□□□□ 0.8
SH3D19-211ENST00000604030 ZDHHC12Q96GR4 267 aa20.08■□□□□ 0.8
SH3D19-211ENST00000604030 ZNF778Q96MU6 729 aa20.08■□□□□ 0.8
SH3D19-211ENST00000604030 NLKQ9UBE8 527 aa20.08■□□□□ 0.8
SH3D19-211ENST00000604030 PHRF1Q9P1Y6 1649 aaKnown RBP20.08■□□□□ 0.8
SH3D19-211ENST00000604030 GPR32O75388 356 aa20.08■□□□□ 0.8
SH3D19-211ENST00000604030 GJA1P17302 382 aa20.08■□□□□ 0.8
SH3D19-211ENST00000604030 PITPNBP48739 271 aa20.08■□□□□ 0.8
SH3D19-211ENST00000604030 GBX1Q14549 363 aa20.08■□□□□ 0.8
SH3D19-211ENST00000604030 CNTN4Q8IWV2 1026 aa20.08■□□□□ 0.8
SH3D19-211ENST00000604030 ZNF486Q96H40 463 aaPredicted RBP20.08■□□□□ 0.8
SH3D19-211ENST00000604030 HERPUD2Q9BSE4 406 aa20.08■□□□□ 0.8
SH3D19-211ENST00000604030 A0A1W2PQL4 384 aaPredicted RBP20.07■□□□□ 0.8
SH3D19-211ENST00000604030 NFKBIEO00221 500 aa20.07■□□□□ 0.8
SH3D19-211ENST00000604030 NPC1O15118 1278 aa20.07■□□□□ 0.8
SH3D19-211ENST00000604030 GJB5O95377 273 aa20.07■□□□□ 0.8
SH3D19-211ENST00000604030 CD68P34810 354 aaPredicted RBP20.07■□□□□ 0.8
SH3D19-211ENST00000604030 LRP8Q14114 963 aa20.07■□□□□ 0.8
SH3D19-211ENST00000604030 ALG10BQ5I7T1 473 aa20.07■□□□□ 0.8
SH3D19-211ENST00000604030 SPARTQ8N0X7 666 aa20.07■□□□□ 0.8
SH3D19-211ENST00000604030 MFSD8Q8NHS3 518 aa20.07■□□□□ 0.8
SH3D19-211ENST00000604030 DEDD2Q8WXF8 326 aa20.07■□□□□ 0.8
SH3D19-211ENST00000604030 CNOT9Q92600 299 aaKnown RBP20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms